RNA–Protein interactions for RNA: ENST00000592234.5

CIRBP-237, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-237ENST00000592234 CLIP1P30622 1438 aa29.96■■■□□ 2.39
CIRBP-237ENST00000592234 PCF11O94913 1555 aaKnown RBP29.94■■■□□ 2.38
CIRBP-237ENST00000592234 EFCAB2Q5VUJ9 269 aa29.93■■■□□ 2.38
CIRBP-237ENST00000592234 MAGI2Q86UL8 1455 aa29.93■■■□□ 2.38
CIRBP-237ENST00000592234 POGZQ7Z3K3 1410 aa29.92■■■□□ 2.38
CIRBP-237ENST00000592234 YEATS2Q9ULM3 1422 aa29.92■■■□□ 2.38
CIRBP-237ENST00000592234 CASKIN1Q8WXD9 1431 aa29.9■■■□□ 2.38
CIRBP-237ENST00000592234 RIMS1Q86UR5 1692 aaKnown RBP29.88■■■□□ 2.37
CIRBP-237ENST00000592234 CCDC18Q5T9S5 1454 aa29.88■■■□□ 2.37
CIRBP-237ENST00000592234 ARHGAP5Q13017 1502 aa29.88■■■□□ 2.37
CIRBP-237ENST00000592234 SIGLEC1Q9BZZ2 1709 aa29.87■■■□□ 2.37
CIRBP-237ENST00000592234 CDC42BPBQ9Y5S2 1711 aa29.84■■■□□ 2.37
CIRBP-237ENST00000592234 FYCO1Q9BQS8 1478 aa29.8■■■□□ 2.36
CIRBP-237ENST00000592234 ZNF518AQ6AHZ1 1483 aa29.79■■■□□ 2.36
CIRBP-237ENST00000592234 PREX2Q70Z35 1606 aa29.78■■■□□ 2.36
CIRBP-237ENST00000592234 ATP10AO60312 1499 aa29.77■■■□□ 2.36
CIRBP-237ENST00000592234 MLECQ14165 292 aa29.76■■■□□ 2.35
CIRBP-237ENST00000592234 FER1L4A9Z1Z3 1794 aa29.76■■■□□ 2.35
CIRBP-237ENST00000592234 C9orf84Q5VXU9 1444 aa29.75■■■□□ 2.35
CIRBP-237ENST00000592234 KDM5CP41229 1560 aa29.74■■■□□ 2.35
CIRBP-237ENST00000592234 ILDR1Q86SU0 546 aaPredicted RBP29.73■■■□□ 2.35
CIRBP-237ENST00000592234 CDC42BPAQ5VT25 1732 aa29.72■■■□□ 2.35
CIRBP-237ENST00000592234 AFAP1Q8N556 730 aa29.72■■■□□ 2.35
CIRBP-237ENST00000592234 PLPPR3Q6T4P5 718 aa29.71■■■□□ 2.35
CIRBP-237ENST00000592234 MYT1LQ9UL68 1186 aa29.71■■■□□ 2.35
CIRBP-237ENST00000592234 ITSN2Q9NZM3 1697 aa29.68■■■□□ 2.34
CIRBP-237ENST00000592234 LMTK3Q96Q04 1460 aa29.68■■■□□ 2.34
CIRBP-237ENST00000592234 ABCC1P33527 1531 aa29.67■■■□□ 2.34
CIRBP-237ENST00000592234 ARHGEF12Q9NZN5 1544 aa29.65■■■□□ 2.34
CIRBP-237ENST00000592234 DIP2CQ9Y2E4 1556 aa29.64■■■□□ 2.33
CIRBP-237ENST00000592234 TRAPPC8Q9Y2L5 1435 aa29.62■■■□□ 2.33
CIRBP-237ENST00000592234 MLH3Q9UHC1 1453 aa29.61■■■□□ 2.33
CIRBP-237ENST00000592234 ABCA6Q8N139 1617 aa29.61■■■□□ 2.33
CIRBP-237ENST00000592234 REREQ9P2R6 1566 aa29.58■■■□□ 2.33
CIRBP-237ENST00000592234 ZNF777Q9ULD5 760 aaPredicted RBP29.56■■■□□ 2.32
CIRBP-237ENST00000592234 SAMD9LQ8IVG5 1584 aa29.55■■■□□ 2.32
CIRBP-237ENST00000592234 GPATCH8Q9UKJ3 1502 aaKnown RBP29.55■■■□□ 2.32
CIRBP-237ENST00000592234 KIDINS220Q9ULH0 1771 aa29.54■■■□□ 2.32
CIRBP-237ENST00000592234 HSPA2P54652 639 aa29.52■■■□□ 2.32
CIRBP-237ENST00000592234 MTUS2Q5JR59 1369 aa29.52■■■□□ 2.32
CIRBP-237ENST00000592234 SYCP2Q9BX26 1530 aa29.5■■■□□ 2.31
CIRBP-237ENST00000592234 CEP162Q5TB80 1403 aa29.49■■■□□ 2.31
CIRBP-237ENST00000592234 CCNB3Q8WWL7 1395 aa29.49■■■□□ 2.31
CIRBP-237ENST00000592234 PREX1Q8TCU6 1659 aa29.48■■■□□ 2.31
CIRBP-237ENST00000592234 AGLP35573 1532 aa29.48■■■□□ 2.31
CIRBP-237ENST00000592234 CEBPAP49715 358 aaPredicted RBP29.47■■■□□ 2.31
CIRBP-237ENST00000592234 CFDP1Q9UEE9 299 aaPredicted RBP29.46■■■□□ 2.31
CIRBP-237ENST00000592234 HNRNPMP52272 730 aaKnown RBP eCLIP29.44■■■□□ 2.3
CIRBP-237ENST00000592234 PLEKHH2Q8IVE3 1493 aa29.43■■■□□ 2.3
CIRBP-237ENST00000592234 SETD1BQ9UPS6 1966 aaKnown RBP29.43■■■□□ 2.3
CIRBP-237ENST00000592234 EHBP1L1Q8N3D4 1523 aa29.43■■■□□ 2.3
CIRBP-237ENST00000592234 ESF1Q9H501 851 aaKnown RBP29.41■■■□□ 2.3
CIRBP-237ENST00000592234 KIAA1107Q9UPP5 1409 aa29.41■■■□□ 2.3
CIRBP-237ENST00000592234 SPAG9O60271 1321 aaKnown RBP29.41■■■□□ 2.3
CIRBP-237ENST00000592234 C3P01024 1663 aa29.4■■■□□ 2.3
CIRBP-237ENST00000592234 TIAM1Q13009 1591 aa29.39■■■□□ 2.29
CIRBP-237ENST00000592234 ATP7AQ04656 1500 aa29.37■■■□□ 2.29
CIRBP-237ENST00000592234 SUPT6HQ7KZ85 1726 aaKnown RBP29.37■■■□□ 2.29
CIRBP-237ENST00000592234 FBXO41Q8TF61 875 aa29.35■■■□□ 2.29
CIRBP-237ENST00000592234 INO80Q9ULG1 1556 aaPredicted RBP29.35■■■□□ 2.29
CIRBP-237ENST00000592234 UHRF1BP1Q6BDS2 1440 aa29.33■■■□□ 2.29
CIRBP-237ENST00000592234 CNTLNQ9NXG0 1405 aa29.31■■■□□ 2.28
CIRBP-237ENST00000592234 ZNF644Q9H582 1327 aaPredicted RBP29.27■■■□□ 2.28
CIRBP-237ENST00000592234 PLXNC1O60486 1568 aa29.26■■■□□ 2.28
CIRBP-237ENST00000592234 MROH2AA6NES4 1674 aa29.26■■■□□ 2.27
CIRBP-237ENST00000592234 A2MP01023 1474 aa29.26■■■□□ 2.27
CIRBP-237ENST00000592234 ADGBQ8N7X0 1667 aa29.25■■■□□ 2.27
CIRBP-237ENST00000592234 LOC105371045A0A1W2PR82 267 aa29.24■■■□□ 2.27
CIRBP-237ENST00000592234 STRCQ7RTU9 1775 aa29.24■■■□□ 2.27
CIRBP-237ENST00000592234 NCOA2Q15596 1464 aa29.23■■■□□ 2.27
CIRBP-237ENST00000592234 MBD5Q9P267 1494 aa29.23■■■□□ 2.27
CIRBP-237ENST00000592234 CLTCQ00610 1675 aaKnown RBP29.21■■■□□ 2.27
CIRBP-237ENST00000592234 VPS8Q8N3P4 1428 aa29.19■■■□□ 2.26
CIRBP-237ENST00000592234 DMRT2Q9Y5R5 561 aa29.17■■■□□ 2.26
CIRBP-237ENST00000592234 ZMYM3Q14202 1370 aa29.16■■■□□ 2.26
CIRBP-237ENST00000592234 RTEL1-TNFRSF6BF6WH68 1400 aa29.16■■■□□ 2.26
CIRBP-237ENST00000592234 GGT6Q6P531 493 aa29.15■■■□□ 2.26
CIRBP-237ENST00000592234 CAMSAP2Q08AD1 1489 aa29.15■■■□□ 2.26
CIRBP-237ENST00000592234 NPATQ14207 1427 aa29.13■■■□□ 2.25
CIRBP-237ENST00000592234 CCDC141Q6ZP82 1450 aa29.12■■■□□ 2.25
CIRBP-237ENST00000592234 CERKQ8TCT0 537 aa29.12■■■□□ 2.25
CIRBP-237ENST00000592234 LRRC9Q6ZRR7 1453 aa29.1■■■□□ 2.25
CIRBP-237ENST00000592234 RSPH4AQ5TD94 716 aa29.09■■■□□ 2.25
CIRBP-237ENST00000592234 DHX29Q7Z478 1369 aaKnown RBP29.07■■■□□ 2.24
CIRBP-237ENST00000592234 PPP6R1Q9UPN7 881 aa29.07■■■□□ 2.24
CIRBP-237ENST00000592234 ARHGEF5Q12774 1597 aa29.05■■■□□ 2.24
CIRBP-237ENST00000592234 PTPRTO14522 1441 aa29.04■■■□□ 2.24
CIRBP-237ENST00000592234 MYO3AQ8NEV4 1616 aa29.03■■■□□ 2.24
CIRBP-237ENST00000592234 NCOA1Q15788 1441 aa29.03■■■□□ 2.24
CIRBP-237ENST00000592234 MAP3K1Q13233 1512 aa29.02■■■□□ 2.24
CIRBP-237ENST00000592234 PTPRKQ15262 1439 aa29.02■■■□□ 2.24
CIRBP-237ENST00000592234 CAMSAP1Q5T5Y3 1602 aa29.02■■■□□ 2.24
CIRBP-237ENST00000592234 ZNF142P52746 1687 aaPredicted RBP29.01■■■□□ 2.23
CIRBP-237ENST00000592234 KIF3BO15066 747 aa28.99■■■□□ 2.23
CIRBP-237ENST00000592234 TSPY4P0CV99 314 aa28.99■■■□□ 2.23
CIRBP-237ENST00000592234 TSPY10P0CW01 314 aa28.99■■■□□ 2.23
CIRBP-237ENST00000592234 KANK4Q5T7N3 995 aaPredicted RBP28.98■■■□□ 2.23
CIRBP-237ENST00000592234 CEP170BQ9Y4F5 1589 aaPredicted RBP28.96■■■□□ 2.23
CIRBP-237ENST00000592234 KDM5DQ9BY66 1539 aa28.92■■■□□ 2.22
CIRBP-237ENST00000592234 FAM135AQ9P2D6 1515 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms