RNA–Protein interactions for RNA: ENST00000591935.5

CIRBP-235, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene CIRBP, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-235ENST00000591935 BCORL1Q5H9F3 1711 aa28.07■■■□□ 2.08
CIRBP-235ENST00000591935 YEATS2Q9ULM3 1422 aa28.07■■■□□ 2.08
CIRBP-235ENST00000591935 FYCO1Q9BQS8 1478 aa28.07■■■□□ 2.08
CIRBP-235ENST00000591935 MAGI2Q86UL8 1455 aa28.06■■■□□ 2.08
CIRBP-235ENST00000591935 CDC42BPBQ9Y5S2 1711 aa28.06■■■□□ 2.08
CIRBP-235ENST00000591935 ARHGAP5Q13017 1502 aa28.04■■■□□ 2.08
CIRBP-235ENST00000591935 POGZQ7Z3K3 1410 aa28.04■■■□□ 2.08
CIRBP-235ENST00000591935 ZFYVE16Q7Z3T8 1539 aa28.03■■■□□ 2.08
CIRBP-235ENST00000591935 SIGLEC1Q9BZZ2 1709 aa28.03■■■□□ 2.08
CIRBP-235ENST00000591935 HECW2Q9P2P5 1572 aa28.02■■■□□ 2.08
CIRBP-235ENST00000591935 PTPRMP28827 1452 aa27.99■■■□□ 2.07
CIRBP-235ENST00000591935 MADDQ8WXG6 1647 aa27.99■■■□□ 2.07
CIRBP-235ENST00000591935 PREX2Q70Z35 1606 aa27.97■■■□□ 2.07
CIRBP-235ENST00000591935 CDC42BPAQ5VT25 1732 aa27.96■■■□□ 2.07
CIRBP-235ENST00000591935 AFAP1Q8N556 730 aa27.96■■■□□ 2.07
CIRBP-235ENST00000591935 ZNF518AQ6AHZ1 1483 aa27.92■■■□□ 2.06
CIRBP-235ENST00000591935 CEP162Q5TB80 1403 aa27.92■■■□□ 2.06
CIRBP-235ENST00000591935 RIMS1Q86UR5 1692 aaKnown RBP27.91■■■□□ 2.06
CIRBP-235ENST00000591935 LOC105371045A0A1W2PR82 267 aa27.9■■■□□ 2.06
CIRBP-235ENST00000591935 ARHGEF12Q9NZN5 1544 aa27.9■■■□□ 2.06
CIRBP-235ENST00000591935 ATP10AO60312 1499 aa27.89■■■□□ 2.06
CIRBP-235ENST00000591935 KDM5CP41229 1560 aa27.89■■■□□ 2.05
CIRBP-235ENST00000591935 MLECQ14165 292 aa27.88■■■□□ 2.05
CIRBP-235ENST00000591935 ABCC1P33527 1531 aa27.87■■■□□ 2.05
CIRBP-235ENST00000591935 TRAPPC8Q9Y2L5 1435 aa27.86■■■□□ 2.05
CIRBP-235ENST00000591935 ITSN2Q9NZM3 1697 aa27.85■■■□□ 2.05
CIRBP-235ENST00000591935 GPATCH8Q9UKJ3 1502 aaKnown RBP27.84■■■□□ 2.05
CIRBP-235ENST00000591935 C9orf84Q5VXU9 1444 aa27.84■■■□□ 2.05
CIRBP-235ENST00000591935 MYT1LQ9UL68 1186 aa27.83■■■□□ 2.05
CIRBP-235ENST00000591935 ZNF777Q9ULD5 760 aaPredicted RBP27.82■■■□□ 2.04
CIRBP-235ENST00000591935 MTUS2Q5JR59 1369 aa27.8■■■□□ 2.04
CIRBP-235ENST00000591935 SAMD9LQ8IVG5 1584 aa27.8■■■□□ 2.04
CIRBP-235ENST00000591935 FER1L4A9Z1Z3 1794 aa27.79■■■□□ 2.04
CIRBP-235ENST00000591935 DIP2CQ9Y2E4 1556 aa27.79■■■□□ 2.04
CIRBP-235ENST00000591935 MLH3Q9UHC1 1453 aa27.79■■■□□ 2.04
CIRBP-235ENST00000591935 PLPPR3Q6T4P5 718 aa27.79■■■□□ 2.04
CIRBP-235ENST00000591935 ABCA6Q8N139 1617 aa27.78■■■□□ 2.04
CIRBP-235ENST00000591935 KIDINS220Q9ULH0 1771 aa27.75■■■□□ 2.03
CIRBP-235ENST00000591935 CCNB3Q8WWL7 1395 aa27.74■■■□□ 2.03
CIRBP-235ENST00000591935 HNRNPMP52272 730 aaKnown RBP eCLIP27.74■■■□□ 2.03
CIRBP-235ENST00000591935 CFDP1Q9UEE9 299 aaPredicted RBP27.73■■■□□ 2.03
CIRBP-235ENST00000591935 SYCP2Q9BX26 1530 aa27.72■■■□□ 2.03
CIRBP-235ENST00000591935 REREQ9P2R6 1566 aa27.7■■■□□ 2.03
CIRBP-235ENST00000591935 EHBP1L1Q8N3D4 1523 aa27.7■■■□□ 2.02
CIRBP-235ENST00000591935 LMTK3Q96Q04 1460 aa27.69■■■□□ 2.02
CIRBP-235ENST00000591935 TIAM1Q13009 1591 aa27.68■■■□□ 2.02
CIRBP-235ENST00000591935 PLEKHH2Q8IVE3 1493 aa27.67■■■□□ 2.02
CIRBP-235ENST00000591935 ZNF644Q9H582 1327 aaPredicted RBP27.66■■■□□ 2.02
CIRBP-235ENST00000591935 CEBPAP49715 358 aaPredicted RBP27.65■■■□□ 2.02
CIRBP-235ENST00000591935 KIAA1107Q9UPP5 1409 aa27.65■■■□□ 2.02
CIRBP-235ENST00000591935 SPAG9O60271 1321 aaKnown RBP27.63■■■□□ 2.01
CIRBP-235ENST00000591935 AGLP35573 1532 aa27.62■■■□□ 2.01
CIRBP-235ENST00000591935 VPS8Q8N3P4 1428 aa27.6■■■□□ 2.01
CIRBP-235ENST00000591935 HSPA2P54652 639 aa27.6■■■□□ 2.01
CIRBP-235ENST00000591935 ILDR1Q86SU0 546 aaPredicted RBP27.58■■■□□ 2.01
CIRBP-235ENST00000591935 SUPT6HQ7KZ85 1726 aaKnown RBP27.58■■■□□ 2.01
CIRBP-235ENST00000591935 NCOA2Q15596 1464 aa27.57■■■□□ 2
CIRBP-235ENST00000591935 ATP7AQ04656 1500 aa27.57■■■□□ 2
CIRBP-235ENST00000591935 ESF1Q9H501 851 aaKnown RBP27.56■■■□□ 2
CIRBP-235ENST00000591935 INO80Q9ULG1 1556 aaPredicted RBP27.56■■■□□ 2
CIRBP-235ENST00000591935 MBD5Q9P267 1494 aa27.54■■■□□ 2
CIRBP-235ENST00000591935 C3P01024 1663 aa27.52■■■□□ 2
CIRBP-235ENST00000591935 SETD1BQ9UPS6 1966 aaKnown RBP27.5■■□□□ 1.99
CIRBP-235ENST00000591935 LRRC9Q6ZRR7 1453 aa27.5■■□□□ 1.99
CIRBP-235ENST00000591935 PREX1Q8TCU6 1659 aa27.49■■□□□ 1.99
CIRBP-235ENST00000591935 KANK4Q5T7N3 995 aaPredicted RBP27.48■■□□□ 1.99
CIRBP-235ENST00000591935 A2MP01023 1474 aa27.48■■□□□ 1.99
CIRBP-235ENST00000591935 CNTLNQ9NXG0 1405 aa27.47■■□□□ 1.99
CIRBP-235ENST00000591935 PLXNC1O60486 1568 aa27.46■■□□□ 1.99
CIRBP-235ENST00000591935 CAMSAP2Q08AD1 1489 aa27.44■■□□□ 1.98
CIRBP-235ENST00000591935 ADGBQ8N7X0 1667 aa27.43■■□□□ 1.98
CIRBP-235ENST00000591935 MAP3K1Q13233 1512 aa27.42■■□□□ 1.98
CIRBP-235ENST00000591935 RSPH4AQ5TD94 716 aa27.42■■□□□ 1.98
CIRBP-235ENST00000591935 RTEL1-TNFRSF6BF6WH68 1400 aa27.41■■□□□ 1.98
CIRBP-235ENST00000591935 UHRF1BP1Q6BDS2 1440 aa27.41■■□□□ 1.98
CIRBP-235ENST00000591935 CCDC141Q6ZP82 1450 aa27.38■■□□□ 1.97
CIRBP-235ENST00000591935 GGT6Q6P531 493 aa27.38■■□□□ 1.97
CIRBP-235ENST00000591935 MROH2AA6NES4 1674 aa27.37■■□□□ 1.97
CIRBP-235ENST00000591935 CLTCQ00610 1675 aaKnown RBP27.37■■□□□ 1.97
CIRBP-235ENST00000591935 ZMYM3Q14202 1370 aa27.35■■□□□ 1.97
CIRBP-235ENST00000591935 PPP6R1Q9UPN7 881 aa27.35■■□□□ 1.97
CIRBP-235ENST00000591935 STRCQ7RTU9 1775 aa27.33■■□□□ 1.97
CIRBP-235ENST00000591935 ARHGEF5Q12774 1597 aa27.33■■□□□ 1.97
CIRBP-235ENST00000591935 DHX29Q7Z478 1369 aaKnown RBP27.33■■□□□ 1.97
CIRBP-235ENST00000591935 DMRT2Q9Y5R5 561 aa27.3■■□□□ 1.96
CIRBP-235ENST00000591935 NPATQ14207 1427 aa27.3■■□□□ 1.96
CIRBP-235ENST00000591935 TSPY4P0CV99 314 aa27.29■■□□□ 1.96
CIRBP-235ENST00000591935 TSPY10P0CW01 314 aa27.29■■□□□ 1.96
CIRBP-235ENST00000591935 FBXO41Q8TF61 875 aa27.29■■□□□ 1.96
CIRBP-235ENST00000591935 APLP2Q06481 763 aa27.28■■□□□ 1.96
CIRBP-235ENST00000591935 MYOM3Q5VTT5 1437 aa27.27■■□□□ 1.96
CIRBP-235ENST00000591935 KIF3BO15066 747 aa27.26■■□□□ 1.95
CIRBP-235ENST00000591935 MIA2Q96PC5 1412 aa27.24■■□□□ 1.95
CIRBP-235ENST00000591935 PTPRKQ15262 1439 aa27.22■■□□□ 1.95
CIRBP-235ENST00000591935 MAST1Q9Y2H9 1570 aa27.19■■□□□ 1.94
CIRBP-235ENST00000591935 FAM135AQ9P2D6 1515 aa27.16■■□□□ 1.94
CIRBP-235ENST00000591935 MYO3AQ8NEV4 1616 aa27.14■■□□□ 1.94
CIRBP-235ENST00000591935 PTPN23Q9H3S7 1636 aa27.13■■□□□ 1.93
CIRBP-235ENST00000591935 CERKQ8TCT0 537 aa27.13■■□□□ 1.93
CIRBP-235ENST00000591935 PTPRTO14522 1441 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms