RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 HRCP23327 699 aa19.32■□□□□ 0.68
PTBP1-216ENST00000590887 CCER1Q8TC90 406 aaPredicted RBP19.31■□□□□ 0.68
PTBP1-216ENST00000590887 ZNF777Q9ULD5 760 aaPredicted RBP19.31■□□□□ 0.68
PTBP1-216ENST00000590887 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.3■□□□□ 0.687e-7■■■□□ 15
PTBP1-216ENST00000590887 PREX2Q70Z35 1606 aa19.3■□□□□ 0.68
PTBP1-216ENST00000590887 ASXL2Q76L83 1435 aa19.3■□□□□ 0.68
PTBP1-216ENST00000590887 PLEKHH2Q8IVE3 1493 aa19.29■□□□□ 0.68
PTBP1-216ENST00000590887 SETD5Q9C0A6 1442 aa19.29■□□□□ 0.68
PTBP1-216ENST00000590887 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
PTBP1-216ENST00000590887 EFCAB2Q5VUJ9 269 aa19.28■□□□□ 0.68
PTBP1-216ENST00000590887 ARAP3Q8WWN8 1544 aa19.27■□□□□ 0.68
PTBP1-216ENST00000590887 PLCH2O75038 1416 aa19.26■□□□□ 0.67
PTBP1-216ENST00000590887 ARHGAP5Q13017 1502 aa19.26■□□□□ 0.67
PTBP1-216ENST00000590887 DNMT1P26358 1616 aaKnown RBP19.26■□□□□ 0.67
PTBP1-216ENST00000590887 DIP2BQ9P265 1576 aa19.25■□□□□ 0.67
PTBP1-216ENST00000590887 TSPY4P0CV99 314 aa19.25■□□□□ 0.67
PTBP1-216ENST00000590887 TSPY10P0CW01 314 aa19.25■□□□□ 0.67
PTBP1-216ENST00000590887 CDC42BPBQ9Y5S2 1711 aa19.25■□□□□ 0.67
PTBP1-216ENST00000590887 DAPK1P53355 1430 aa19.25■□□□□ 0.67
PTBP1-216ENST00000590887 TTC37Q6PGP7 1564 aa19.24■□□□□ 0.67
PTBP1-216ENST00000590887 AKNAQ7Z591 1439 aa19.24■□□□□ 0.67
PTBP1-216ENST00000590887 ROCK1Q13464 1354 aa19.23■□□□□ 0.67
PTBP1-216ENST00000590887 ABCA9Q8IUA7 1624 aa19.23■□□□□ 0.67
PTBP1-216ENST00000590887 HFM1A2PYH4 1435 aa19.21■□□□□ 0.67
PTBP1-216ENST00000590887 KIAA1107Q9UPP5 1409 aa19.21■□□□□ 0.67
PTBP1-216ENST00000590887 ARHGEF5Q12774 1597 aa19.2■□□□□ 0.66
PTBP1-216ENST00000590887 ABCC5O15440 1437 aa19.2■□□□□ 0.66
PTBP1-216ENST00000590887 ZNF644Q9H582 1327 aaPredicted RBP19.2■□□□□ 0.66
PTBP1-216ENST00000590887 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
PTBP1-216ENST00000590887 RAB3GAP2Q9H2M9 1393 aa19.19■□□□□ 0.66
PTBP1-216ENST00000590887 FAM69CQ0P6D2 419 aa19.18■□□□□ 0.66
PTBP1-216ENST00000590887 SHANK2Q9UPX8 1470 aa19.17■□□□□ 0.66
PTBP1-216ENST00000590887 ADGBQ8N7X0 1667 aa19.17■□□□□ 0.66
PTBP1-216ENST00000590887 ANKRD30AQ9BXX3 1397 aa19.17■□□□□ 0.66
PTBP1-216ENST00000590887 SAMD9LQ8IVG5 1584 aa19.16■□□□□ 0.66
PTBP1-216ENST00000590887 CHIC2Q9UKJ5 165 aa19.16■□□□□ 0.66
PTBP1-216ENST00000590887 PTPRKQ15262 1439 aa19.16■□□□□ 0.66
PTBP1-216ENST00000590887 CFAP74Q9C0B2 1584 aa19.15■□□□□ 0.66
PTBP1-216ENST00000590887 CROCC2H7BZ55 1655 aa19.15■□□□□ 0.66
PTBP1-216ENST00000590887 CCDC141Q6ZP82 1450 aa19.15■□□□□ 0.66
PTBP1-216ENST00000590887 GCC2Q8IWJ2 1684 aa19.14■□□□□ 0.66
PTBP1-216ENST00000590887 HNRNPMP52272 730 aaKnown RBP eCLIP19.13■□□□□ 0.654e-7■■■■□ 21.4
PTBP1-216ENST00000590887 NAIPQ13075 1403 aa19.13■□□□□ 0.65
PTBP1-216ENST00000590887 CD109Q6YHK3 1445 aa19.13■□□□□ 0.65
PTBP1-216ENST00000590887 GLI2P10070 1586 aa19.12■□□□□ 0.65
PTBP1-216ENST00000590887 ADGRL2O95490 1459 aa19.12■□□□□ 0.65
PTBP1-216ENST00000590887 RRP7BPQ9NSQ0 103 aa19.12■□□□□ 0.65
PTBP1-216ENST00000590887 FANCAO15360 1455 aa19.11■□□□□ 0.65
PTBP1-216ENST00000590887 MBD5Q9P267 1494 aa19.11■□□□□ 0.65
PTBP1-216ENST00000590887 C9orf84Q5VXU9 1444 aa19.09■□□□□ 0.65
PTBP1-216ENST00000590887 SYCP2Q9BX26 1530 aa19.09■□□□□ 0.65
PTBP1-216ENST00000590887 NCOA1Q15788 1441 aa19.08■□□□□ 0.65
PTBP1-216ENST00000590887 ABCC1P33527 1531 aa19.08■□□□□ 0.64
PTBP1-216ENST00000590887 MAST1Q9Y2H9 1570 aa19.07■□□□□ 0.64
PTBP1-216ENST00000590887 PPRC1Q5VV67 1664 aaKnown RBP19.07■□□□□ 0.64
PTBP1-216ENST00000590887 DHX57Q6P158 1386 aaKnown RBP19.06■□□□□ 0.64
PTBP1-216ENST00000590887 TSPOAP1O95153 1857 aa19.04■□□□□ 0.64
PTBP1-216ENST00000590887 MAP3K4Q9Y6R4 1608 aa19.03■□□□□ 0.64
PTBP1-216ENST00000590887 ADGRL1O94910 1474 aa19.03■□□□□ 0.64
PTBP1-216ENST00000590887 NEO1Q92859 1461 aa19.03■□□□□ 0.64
PTBP1-216ENST00000590887 RTEL1-TNFRSF6BF6WH68 1400 aa19.02■□□□□ 0.64
PTBP1-216ENST00000590887 TRIM52Q96A61 297 aa19.02■□□□□ 0.64
PTBP1-216ENST00000590887 SPAG9O60271 1321 aaKnown RBP19■□□□□ 0.63
PTBP1-216ENST00000590887 SCAPERQ9BY12 1400 aa19■□□□□ 0.63
PTBP1-216ENST00000590887 KIF15Q9NS87 1388 aa18.99■□□□□ 0.63
PTBP1-216ENST00000590887 ANKRD50Q9ULJ7 1429 aa18.99■□□□□ 0.63
PTBP1-216ENST00000590887 PLXNC1O60486 1568 aa18.98■□□□□ 0.63
PTBP1-216ENST00000590887 TEX14Q8IWB6 1497 aa18.98■□□□□ 0.63
PTBP1-216ENST00000590887 ARHGEF12Q9NZN5 1544 aa18.97■□□□□ 0.63
PTBP1-216ENST00000590887 MYT1LQ9UL68 1186 aa18.97■□□□□ 0.63
PTBP1-216ENST00000590887 ZNF518AQ6AHZ1 1483 aa18.97■□□□□ 0.63
PTBP1-216ENST00000590887 DUOX2Q9NRD8 1548 aa18.95■□□□□ 0.62
PTBP1-216ENST00000590887 TRAPPC8Q9Y2L5 1435 aa18.94■□□□□ 0.62
PTBP1-216ENST00000590887 KDM6BO15054 1643 aa18.92■□□□□ 0.62
PTBP1-216ENST00000590887 AFAP1Q8N556 730 aa18.92■□□□□ 0.62
PTBP1-216ENST00000590887 DENND4BO75064 1496 aaPredicted RBP18.91■□□□□ 0.62
PTBP1-216ENST00000590887 TIMELESSQ9UNS1 1208 aa18.91■□□□□ 0.62
PTBP1-216ENST00000590887 ERBINQ96RT1 1412 aa18.91■□□□□ 0.62
PTBP1-216ENST00000590887 MPHOSPH9Q99550 1183 aa18.9■□□□□ 0.62
PTBP1-216ENST00000590887 POGZQ7Z3K3 1410 aa18.89■□□□□ 0.61
PTBP1-216ENST00000590887 ATP7AQ04656 1500 aa18.89■□□□□ 0.61
PTBP1-216ENST00000590887 COL17A1Q9UMD9 1497 aaPredicted RBP18.88■□□□□ 0.61
PTBP1-216ENST00000590887 ZFYVE16Q7Z3T8 1539 aa18.87■□□□□ 0.61
PTBP1-216ENST00000590887 SLC4A1APQ9BWU0 796 aaKnown RBP18.87■□□□□ 0.61
PTBP1-216ENST00000590887 INO80Q9ULG1 1556 aaPredicted RBP18.86■□□□□ 0.61
PTBP1-216ENST00000590887 MLH3Q9UHC1 1453 aa18.86■□□□□ 0.61
PTBP1-216ENST00000590887 KDM5CP41229 1560 aa18.85■□□□□ 0.61
PTBP1-216ENST00000590887 NUP155O75694 1391 aa18.84■□□□□ 0.61
PTBP1-216ENST00000590887 KDM5DQ9BY66 1539 aa18.83■□□□□ 0.6
PTBP1-216ENST00000590887 HECW2Q9P2P5 1572 aa18.82■□□□□ 0.6
PTBP1-216ENST00000590887 DHX29Q7Z478 1369 aaKnown RBP18.81■□□□□ 0.6
PTBP1-216ENST00000590887 EIF2AK4Q9P2K8 1649 aaKnown RBP18.8■□□□□ 0.6
PTBP1-216ENST00000590887 KANK1Q14678 1352 aa18.8■□□□□ 0.6
PTBP1-216ENST00000590887 UNC13BO14795 1591 aa18.79■□□□□ 0.6
PTBP1-216ENST00000590887 KIDINS220Q9ULH0 1771 aa18.78■□□□□ 0.6
PTBP1-216ENST00000590887 MAGI2Q86UL8 1455 aa18.78■□□□□ 0.6
PTBP1-216ENST00000590887 RICTORQ6R327 1708 aa18.78■□□□□ 0.6
PTBP1-216ENST00000590887 NEUROD1Q13562 356 aa18.76■□□□□ 0.59
PTBP1-216ENST00000590887 A2MP01023 1474 aa18.76■□□□□ 0.59
PTBP1-216ENST00000590887 PZPP20742 1482 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms