RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 KIF14Q15058 1648 aa35.65■■■■□ 3.3
DDX39A-215ENST00000590696 MAGI2Q86UL8 1455 aa35.65■■■■□ 3.3
DDX39A-215ENST00000590696 TROQ12816 1431 aaPredicted RBP35.65■■■■□ 3.3
DDX39A-215ENST00000590696 POGZQ7Z3K3 1410 aa35.64■■■■□ 3.3
DDX39A-215ENST00000590696 LRRIQ1Q96JM4 1722 aa35.63■■■■□ 3.29
DDX39A-215ENST00000590696 CLIP1P30622 1438 aa35.6■■■■□ 3.29
DDX39A-215ENST00000590696 RIMS1Q86UR5 1692 aaKnown RBP35.58■■■■□ 3.29
DDX39A-215ENST00000590696 SIGLEC1Q9BZZ2 1709 aa35.57■■■■□ 3.28
DDX39A-215ENST00000590696 ARHGAP5Q13017 1502 aa35.53■■■■□ 3.28
DDX39A-215ENST00000590696 CASKIN1Q8WXD9 1431 aa35.53■■■■□ 3.28
DDX39A-215ENST00000590696 PCF11O94913 1555 aaKnown RBP35.52■■■■□ 3.28
DDX39A-215ENST00000590696 MLECQ14165 292 aa35.5■■■■□ 3.27
DDX39A-215ENST00000590696 CCDC18Q5T9S5 1454 aa35.48■■■■□ 3.27
DDX39A-215ENST00000590696 ATP10AO60312 1499 aa35.48■■■■□ 3.27
DDX39A-215ENST00000590696 PLPPR3Q6T4P5 718 aa35.46■■■■□ 3.27
DDX39A-215ENST00000590696 ZNF518AQ6AHZ1 1483 aa35.45■■■■□ 3.27
DDX39A-215ENST00000590696 AFAP1Q8N556 730 aa35.44■■■■□ 3.26
DDX39A-215ENST00000590696 LMTK3Q96Q04 1460 aa35.43■■■■□ 3.26
DDX39A-215ENST00000590696 C9orf84Q5VXU9 1444 aa35.43■■■■□ 3.26
DDX39A-215ENST00000590696 CDC42BPBQ9Y5S2 1711 aa35.42■■■■□ 3.26
DDX39A-215ENST00000590696 KDM5CP41229 1560 aa35.38■■■■□ 3.25
DDX39A-215ENST00000590696 FYCO1Q9BQS8 1478 aa35.38■■■■□ 3.25
DDX39A-215ENST00000590696 MYT1LQ9UL68 1186 aa35.37■■■■□ 3.25
DDX39A-215ENST00000590696 FER1L4A9Z1Z3 1794 aa35.37■■■■□ 3.25
DDX39A-215ENST00000590696 PREX2Q70Z35 1606 aa35.36■■■■□ 3.25
DDX39A-215ENST00000590696 ARHGEF12Q9NZN5 1544 aa35.32■■■■□ 3.25
DDX39A-215ENST00000590696 ABCC1P33527 1531 aa35.28■■■■□ 3.24
DDX39A-215ENST00000590696 HSPA2P54652 639 aa35.28■■■■□ 3.24
DDX39A-215ENST00000590696 TRAPPC8Q9Y2L5 1435 aa35.27■■■■□ 3.24
DDX39A-215ENST00000590696 CDC42BPAQ5VT25 1732 aa35.26■■■■□ 3.24
DDX39A-215ENST00000590696 DIP2CQ9Y2E4 1556 aa35.26■■■■□ 3.24
DDX39A-215ENST00000590696 MLH3Q9UHC1 1453 aa35.26■■■■□ 3.23
DDX39A-215ENST00000590696 ITSN2Q9NZM3 1697 aa35.24■■■■□ 3.23
DDX39A-215ENST00000590696 ABCA6Q8N139 1617 aa35.21■■■■□ 3.23
DDX39A-215ENST00000590696 REREQ9P2R6 1566 aa35.2■■■■□ 3.23
DDX39A-215ENST00000590696 CEBPAP49715 358 aaPredicted RBP35.19■■■■□ 3.22
DDX39A-215ENST00000590696 ZNF777Q9ULD5 760 aaPredicted RBP35.19■■■■□ 3.22
DDX39A-215ENST00000590696 FBXO41Q8TF61 875 aa35.15■■■■□ 3.22
DDX39A-215ENST00000590696 GPATCH8Q9UKJ3 1502 aaKnown RBP35.15■■■■□ 3.22
DDX39A-215ENST00000590696 KIDINS220Q9ULH0 1771 aa35.12■■■■□ 3.21
DDX39A-215ENST00000590696 SAMD9LQ8IVG5 1584 aa35.12■■■■□ 3.21
DDX39A-215ENST00000590696 AGLP35573 1532 aa35.1■■■■□ 3.21
DDX39A-215ENST00000590696 PREX1Q8TCU6 1659 aa35.08■■■■□ 3.21
DDX39A-215ENST00000590696 HNRNPMP52272 730 aaKnown RBP eCLIP35.07■■■■□ 3.24e-15■■■■□ 20.6
DDX39A-215ENST00000590696 MTUS2Q5JR59 1369 aa35.07■■■■□ 3.2
DDX39A-215ENST00000590696 SYCP2Q9BX26 1530 aa35.06■■■■□ 3.2
DDX39A-215ENST00000590696 CFDP1Q9UEE9 299 aaPredicted RBP35.06■■■■□ 3.2
DDX39A-215ENST00000590696 CCNB3Q8WWL7 1395 aa35.05■■■■□ 3.2
DDX39A-215ENST00000590696 ESF1Q9H501 851 aaKnown RBP35.03■■■■□ 3.2
DDX39A-215ENST00000590696 SPAG9O60271 1321 aaKnown RBP35.02■■■■□ 3.2
DDX39A-215ENST00000590696 KIAA1107Q9UPP5 1409 aa34.99■■■■□ 3.19
DDX39A-215ENST00000590696 CEP162Q5TB80 1403 aa34.98■■■■□ 3.19
DDX39A-215ENST00000590696 PLEKHH2Q8IVE3 1493 aa34.98■■■■□ 3.19
DDX39A-215ENST00000590696 UHRF1BP1Q6BDS2 1440 aa34.98■■■■□ 3.19
DDX39A-215ENST00000590696 C3P01024 1663 aa34.97■■■■□ 3.19
DDX39A-215ENST00000590696 SETD1BQ9UPS6 1966 aaKnown RBP34.94■■■■□ 3.18
DDX39A-215ENST00000590696 ATP7AQ04656 1500 aa34.91■■■■□ 3.18
DDX39A-215ENST00000590696 EHBP1L1Q8N3D4 1523 aa34.91■■■■□ 3.18
DDX39A-215ENST00000590696 CNTLNQ9NXG0 1405 aa34.9■■■■□ 3.18
DDX39A-215ENST00000590696 TIAM1Q13009 1591 aa34.9■■■■□ 3.18
DDX39A-215ENST00000590696 SUPT6HQ7KZ85 1726 aaKnown RBP34.88■■■■□ 3.17
DDX39A-215ENST00000590696 INO80Q9ULG1 1556 aaPredicted RBP34.87■■■■□ 3.17
DDX39A-215ENST00000590696 ZNF644Q9H582 1327 aaPredicted RBP34.87■■■■□ 3.17
DDX39A-215ENST00000590696 CERKQ8TCT0 537 aa34.84■■■■□ 3.17
DDX39A-215ENST00000590696 STRCQ7RTU9 1775 aa34.84■■■■□ 3.17
DDX39A-215ENST00000590696 DMRT2Q9Y5R5 561 aa34.83■■■■□ 3.17
DDX39A-215ENST00000590696 A2MP01023 1474 aa34.83■■■■□ 3.17
DDX39A-215ENST00000590696 PLXNC1O60486 1568 aa34.8■■■■□ 3.16
DDX39A-215ENST00000590696 MROH2AA6NES4 1674 aa34.79■■■■□ 3.16
DDX39A-215ENST00000590696 MBD5Q9P267 1494 aa34.78■■■■□ 3.16
DDX39A-215ENST00000590696 ZMYM3Q14202 1370 aa34.78■■■■□ 3.16
DDX39A-215ENST00000590696 GGT6Q6P531 493 aa34.74■■■■□ 3.15
DDX39A-215ENST00000590696 ADGBQ8N7X0 1667 aa34.73■■■■□ 3.15
DDX39A-215ENST00000590696 NPATQ14207 1427 aa34.72■■■■□ 3.15
DDX39A-215ENST00000590696 NCOA2Q15596 1464 aa34.72■■■■□ 3.15
DDX39A-215ENST00000590696 LOC105371045A0A1W2PR82 267 aa34.72■■■■□ 3.15
DDX39A-215ENST00000590696 CLTCQ00610 1675 aaKnown RBP34.71■■■■□ 3.15
DDX39A-215ENST00000590696 RTEL1-TNFRSF6BF6WH68 1400 aa34.7■■■■□ 3.15
DDX39A-215ENST00000590696 PTPRTO14522 1441 aa34.67■■■■□ 3.14
DDX39A-215ENST00000590696 PPP6R1Q9UPN7 881 aa34.64■■■■□ 3.14
DDX39A-215ENST00000590696 CAMSAP2Q08AD1 1489 aa34.64■■■■□ 3.14
DDX39A-215ENST00000590696 DHX29Q7Z478 1369 aaKnown RBP34.62■■■■□ 3.13
DDX39A-215ENST00000590696 NCOA1Q15788 1441 aa34.62■■■■□ 3.13
DDX39A-215ENST00000590696 VPS8Q8N3P4 1428 aa34.62■■■■□ 3.13
DDX39A-215ENST00000590696 CCDC141Q6ZP82 1450 aa34.61■■■■□ 3.13
DDX39A-215ENST00000590696 PTPRKQ15262 1439 aa34.59■■■■□ 3.13
DDX39A-215ENST00000590696 RSPH4AQ5TD94 716 aa34.59■■■■□ 3.13
DDX39A-215ENST00000590696 CAMSAP1Q5T5Y3 1602 aa34.58■■■■□ 3.13
DDX39A-215ENST00000590696 LRRC9Q6ZRR7 1453 aa34.55■■■■□ 3.12
DDX39A-215ENST00000590696 MYO3AQ8NEV4 1616 aa34.53■■■■□ 3.12
DDX39A-215ENST00000590696 KIF3BO15066 747 aa34.53■■■■□ 3.12
DDX39A-215ENST00000590696 ZNF142P52746 1687 aaPredicted RBP34.5■■■■□ 3.11
DDX39A-215ENST00000590696 NCKAP5LQ9HCH0 1330 aa34.49■■■■□ 3.11
DDX39A-215ENST00000590696 ARHGEF5Q12774 1597 aa34.49■■■■□ 3.11
DDX39A-215ENST00000590696 TSPY4P0CV99 314 aa34.48■■■■□ 3.11
DDX39A-215ENST00000590696 TSPY10P0CW01 314 aa34.48■■■■□ 3.11
DDX39A-215ENST00000590696 CEP170BQ9Y4F5 1589 aaPredicted RBP34.48■■■■□ 3.11
DDX39A-215ENST00000590696 KANK4Q5T7N3 995 aaPredicted RBP34.46■■■■□ 3.11
DDX39A-215ENST00000590696 LTBP4Q8N2S1 1624 aa34.44■■■■□ 3.1
DDX39A-215ENST00000590696 MAP3K1Q13233 1512 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms