RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 AKNAQ7Z591 1439 aa14.31□□□□□ -0.12
VPS25-205ENST00000590339 CCNB3Q8WWL7 1395 aa14.3□□□□□ -0.12
VPS25-205ENST00000590339 FANCAO15360 1455 aa14.3□□□□□ -0.12
VPS25-205ENST00000590339 EFCAB2Q5VUJ9 269 aa14.29□□□□□ -0.12
VPS25-205ENST00000590339 DENND4BO75064 1496 aaPredicted RBP14.27□□□□□ -0.12
VPS25-205ENST00000590339 PLCH2O75038 1416 aa14.27□□□□□ -0.12
VPS25-205ENST00000590339 TROQ12816 1431 aaPredicted RBP14.27□□□□□ -0.12
VPS25-205ENST00000590339 MYT1LQ9UL68 1186 aa14.26□□□□□ -0.13
VPS25-205ENST00000590339 TTC37Q6PGP7 1564 aa14.26□□□□□ -0.13
VPS25-205ENST00000590339 SCAPERQ9BY12 1400 aa14.25□□□□□ -0.13
VPS25-205ENST00000590339 ZEB1P37275 1124 aaPredicted RBP14.24□□□□□ -0.13
VPS25-205ENST00000590339 NCOA2Q15596 1464 aa14.24□□□□□ -0.13
VPS25-205ENST00000590339 MTUS2Q5JR59 1369 aa14.23□□□□□ -0.13
VPS25-205ENST00000590339 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.23□□□□□ -0.13
VPS25-205ENST00000590339 AFAP1Q8N556 730 aa14.22□□□□□ -0.13
VPS25-205ENST00000590339 ZNF777Q9ULD5 760 aaPredicted RBP14.22□□□□□ -0.13
VPS25-205ENST00000590339 MLECQ14165 292 aa14.21□□□□□ -0.13
VPS25-205ENST00000590339 FGD6Q6ZV73 1430 aa14.21□□□□□ -0.13
VPS25-205ENST00000590339 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
VPS25-205ENST00000590339 MYOM3Q5VTT5 1437 aa14.2□□□□□ -0.14
VPS25-205ENST00000590339 KIF14Q15058 1648 aa14.19□□□□□ -0.14
VPS25-205ENST00000590339 ARHGAP5Q13017 1502 aa14.18□□□□□ -0.14
VPS25-205ENST00000590339 FRMPD1Q5SYB0 1578 aa14.17□□□□□ -0.14
VPS25-205ENST00000590339 YEATS2Q9ULM3 1422 aa14.17□□□□□ -0.14
VPS25-205ENST00000590339 TCOF1Q13428 1488 aaKnown RBP14.17□□□□□ -0.14
VPS25-205ENST00000590339 PTPN23Q9H3S7 1636 aa14.16□□□□□ -0.14
VPS25-205ENST00000590339 CFAP74Q9C0B2 1584 aa14.16□□□□□ -0.14
VPS25-205ENST00000590339 POGZQ7Z3K3 1410 aa14.15□□□□□ -0.14
VPS25-205ENST00000590339 CFDP1Q9UEE9 299 aaPredicted RBP14.14□□□□□ -0.15
VPS25-205ENST00000590339 HNRNPMP52272 730 aaKnown RBP eCLIP14.13□□□□□ -0.15
VPS25-205ENST00000590339 ITSN2Q9NZM3 1697 aa14.13□□□□□ -0.15
VPS25-205ENST00000590339 ZFYVE16Q7Z3T8 1539 aa14.11□□□□□ -0.15
VPS25-205ENST00000590339 RICTORQ6R327 1708 aa14.11□□□□□ -0.15
VPS25-205ENST00000590339 CCER1Q8TC90 406 aaPredicted RBP14.11□□□□□ -0.15
VPS25-205ENST00000590339 MIA2Q96PC5 1412 aa14.11□□□□□ -0.15
VPS25-205ENST00000590339 MAGI2Q86UL8 1455 aa14.11□□□□□ -0.15
VPS25-205ENST00000590339 MYO5CQ9NQX4 1742 aa14.1□□□□□ -0.15
VPS25-205ENST00000590339 TRAPPC8Q9Y2L5 1435 aa14.1□□□□□ -0.15
VPS25-205ENST00000590339 ATP10AO60312 1499 aa14.09□□□□□ -0.15
VPS25-205ENST00000590339 PTPRMP28827 1452 aa14.09□□□□□ -0.15
VPS25-205ENST00000590339 GPATCH8Q9UKJ3 1502 aaKnown RBP14.09□□□□□ -0.15
VPS25-205ENST00000590339 ZNF518AQ6AHZ1 1483 aa14.08□□□□□ -0.16
VPS25-205ENST00000590339 ZMYM4Q5VZL5 1548 aa14.08□□□□□ -0.16
VPS25-205ENST00000590339 ARHGEF40Q8TER5 1519 aa14.08□□□□□ -0.16
VPS25-205ENST00000590339 ARHGEF12Q9NZN5 1544 aa14.08□□□□□ -0.16
VPS25-205ENST00000590339 ZNF644Q9H582 1327 aaPredicted RBP14.08□□□□□ -0.16
VPS25-205ENST00000590339 GCC2Q8IWJ2 1684 aa14.07□□□□□ -0.16
VPS25-205ENST00000590339 DHX57Q6P158 1386 aaKnown RBP14.06□□□□□ -0.16
VPS25-205ENST00000590339 DNMT1P26358 1616 aaKnown RBP14.05□□□□□ -0.16
VPS25-205ENST00000590339 CEBPAP49715 358 aaPredicted RBP14.05□□□□□ -0.16
VPS25-205ENST00000590339 SPAG9O60271 1321 aaKnown RBP14.05□□□□□ -0.16
VPS25-205ENST00000590339 C9orf84Q5VXU9 1444 aa14.05□□□□□ -0.16
VPS25-205ENST00000590339 SETD5Q9C0A6 1442 aa14.05□□□□□ -0.16
VPS25-205ENST00000590339 ADAMTSL3P82987 1691 aa14.04□□□□□ -0.16
VPS25-205ENST00000590339 CDC42BPAQ5VT25 1732 aa14.04□□□□□ -0.16
VPS25-205ENST00000590339 CDC42BPBQ9Y5S2 1711 aa14.04□□□□□ -0.16
VPS25-205ENST00000590339 PTPRKQ15262 1439 aa14.04□□□□□ -0.16
VPS25-205ENST00000590339 FAM50AQ14320 339 aaKnown RBP14.03□□□□□ -0.16
VPS25-205ENST00000590339 RAB3GAP2Q9H2M9 1393 aa14.03□□□□□ -0.16
VPS25-205ENST00000590339 BCORL1Q5H9F3 1711 aa14.03□□□□□ -0.16
VPS25-205ENST00000590339 CROCC2H7BZ55 1655 aa14.02□□□□□ -0.16
VPS25-205ENST00000590339 PREX2Q70Z35 1606 aa14.02□□□□□ -0.16
VPS25-205ENST00000590339 MADDQ8WXG6 1647 aa14.02□□□□□ -0.16
VPS25-205ENST00000590339 HECW2Q9P2P5 1572 aa14.02□□□□□ -0.16
VPS25-205ENST00000590339 HFM1A2PYH4 1435 aa14.02□□□□□ -0.16
VPS25-205ENST00000590339 CLSPNQ9HAW4 1339 aa14.02□□□□□ -0.17
VPS25-205ENST00000590339 ESF1Q9H501 851 aaKnown RBP14.02□□□□□ -0.17
VPS25-205ENST00000590339 ABCC1P33527 1531 aa14.01□□□□□ -0.17
VPS25-205ENST00000590339 MLH3Q9UHC1 1453 aa14.01□□□□□ -0.17
VPS25-205ENST00000590339 HSPA2P54652 639 aa14□□□□□ -0.17
VPS25-205ENST00000590339 SIGLEC1Q9BZZ2 1709 aa13.99□□□□□ -0.17
VPS25-205ENST00000590339 KDM5CP41229 1560 aa13.99□□□□□ -0.17
VPS25-205ENST00000590339 SYCP2Q9BX26 1530 aa13.99□□□□□ -0.17
VPS25-205ENST00000590339 KIAA1107Q9UPP5 1409 aa13.98□□□□□ -0.17
VPS25-205ENST00000590339 ADGBQ8N7X0 1667 aa13.98□□□□□ -0.17
VPS25-205ENST00000590339 SAMD9LQ8IVG5 1584 aa13.98□□□□□ -0.17
VPS25-205ENST00000590339 CAMSAP2Q08AD1 1489 aa13.98□□□□□ -0.17
VPS25-205ENST00000590339 ITGAEP38570 1179 aa13.97□□□□□ -0.17
VPS25-205ENST00000590339 PLEKHH2Q8IVE3 1493 aa13.97□□□□□ -0.17
VPS25-205ENST00000590339 RIMS1Q86UR5 1692 aaKnown RBP13.97□□□□□ -0.17
VPS25-205ENST00000590339 NAIPQ13075 1403 aa13.97□□□□□ -0.17
VPS25-205ENST00000590339 GGT6Q6P531 493 aa13.96□□□□□ -0.17
VPS25-205ENST00000590339 DAPK1P53355 1430 aa13.96□□□□□ -0.18
VPS25-205ENST00000590339 DIP2CQ9Y2E4 1556 aa13.96□□□□□ -0.18
VPS25-205ENST00000590339 TSPY4P0CV99 314 aa13.93□□□□□ -0.18
VPS25-205ENST00000590339 TSPY10P0CW01 314 aa13.93□□□□□ -0.18
VPS25-205ENST00000590339 ABCA6Q8N139 1617 aa13.93□□□□□ -0.18
VPS25-205ENST00000590339 ABCC5O15440 1437 aa13.92□□□□□ -0.18
VPS25-205ENST00000590339 RSPH4AQ5TD94 716 aa13.92□□□□□ -0.18
VPS25-205ENST00000590339 ROCK1Q13464 1354 aa13.92□□□□□ -0.18
VPS25-205ENST00000590339 ADGRL2O95490 1459 aa13.92□□□□□ -0.18
VPS25-205ENST00000590339 MBD5Q9P267 1494 aa13.92□□□□□ -0.18
VPS25-205ENST00000590339 ARHGEF5Q12774 1597 aa13.92□□□□□ -0.18
VPS25-205ENST00000590339 LMTK3Q96Q04 1460 aa13.91□□□□□ -0.18
VPS25-205ENST00000590339 SHANK2Q9UPX8 1470 aa13.91□□□□□ -0.18
VPS25-205ENST00000590339 KIDINS220Q9ULH0 1771 aa13.91□□□□□ -0.18
VPS25-205ENST00000590339 A2MP01023 1474 aa13.9□□□□□ -0.18
VPS25-205ENST00000590339 AGLP35573 1532 aa13.89□□□□□ -0.19
VPS25-205ENST00000590339 ATP7AQ04656 1500 aa13.89□□□□□ -0.19
VPS25-205ENST00000590339 KIF3BO15066 747 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms