RNA–Protein interactions for RNA: ENST00000590248.1

NEDD4L-228, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 730 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-228ENST00000590248 ARHGAP5Q13017 1502 aa22.11■■□□□ 1.13
NEDD4L-228ENST00000590248 ARID4BQ4LE39 1312 aaPredicted RBP22.09■■□□□ 1.13
NEDD4L-228ENST00000590248 YEATS2Q9ULM3 1422 aa22.07■■□□□ 1.12
NEDD4L-228ENST00000590248 CDC42BPAQ5VT25 1732 aa22.07■■□□□ 1.12
NEDD4L-228ENST00000590248 ARHGEF40Q8TER5 1519 aa22.06■■□□□ 1.12
NEDD4L-228ENST00000590248 ZMYM4Q5VZL5 1548 aa22.06■■□□□ 1.12
NEDD4L-228ENST00000590248 POGZQ7Z3K3 1410 aa22.06■■□□□ 1.12
NEDD4L-228ENST00000590248 SIGLEC1Q9BZZ2 1709 aa22.05■■□□□ 1.12
NEDD4L-228ENST00000590248 PREX2Q70Z35 1606 aa22.05■■□□□ 1.12
NEDD4L-228ENST00000590248 ADAMTSL3P82987 1691 aa22.04■■□□□ 1.12
NEDD4L-228ENST00000590248 BCORL1Q5H9F3 1711 aa22.04■■□□□ 1.12
NEDD4L-228ENST00000590248 AFAP1Q8N556 730 aa22.04■■□□□ 1.12
NEDD4L-228ENST00000590248 ZFYVE16Q7Z3T8 1539 aa22.04■■□□□ 1.12
NEDD4L-228ENST00000590248 MAGI2Q86UL8 1455 aa21.99■■□□□ 1.11
NEDD4L-228ENST00000590248 MYT1LQ9UL68 1186 aa21.99■■□□□ 1.11
NEDD4L-228ENST00000590248 ZNF777Q9ULD5 760 aaPredicted RBP21.99■■□□□ 1.11
NEDD4L-228ENST00000590248 ARHGEF12Q9NZN5 1544 aa21.98■■□□□ 1.11
NEDD4L-228ENST00000590248 MADDQ8WXG6 1647 aa21.98■■□□□ 1.11
NEDD4L-228ENST00000590248 MTUS2Q5JR59 1369 aa21.98■■□□□ 1.11
NEDD4L-228ENST00000590248 GPATCH8Q9UKJ3 1502 aaKnown RBP21.96■■□□□ 1.11
NEDD4L-228ENST00000590248 MLECQ14165 292 aa21.96■■□□□ 1.11
NEDD4L-228ENST00000590248 ZNF518AQ6AHZ1 1483 aa21.96■■□□□ 1.11
NEDD4L-228ENST00000590248 ITSN2Q9NZM3 1697 aa21.95■■□□□ 1.1
NEDD4L-228ENST00000590248 TRAPPC8Q9Y2L5 1435 aa21.95■■□□□ 1.1
NEDD4L-228ENST00000590248 PTPRMP28827 1452 aa21.95■■□□□ 1.1
NEDD4L-228ENST00000590248 ABCC1P33527 1531 aa21.95■■□□□ 1.1
NEDD4L-228ENST00000590248 KDM5CP41229 1560 aa21.93■■□□□ 1.1
NEDD4L-228ENST00000590248 RIMS1Q86UR5 1692 aaKnown RBP21.93■■□□□ 1.1
NEDD4L-228ENST00000590248 HECW2Q9P2P5 1572 aa21.93■■□□□ 1.1
NEDD4L-228ENST00000590248 SAMD9LQ8IVG5 1584 aa21.92■■□□□ 1.1
NEDD4L-228ENST00000590248 ATP10AO60312 1499 aa21.92■■□□□ 1.1
NEDD4L-228ENST00000590248 PLPPR3Q6T4P5 718 aa21.92■■□□□ 1.1
NEDD4L-228ENST00000590248 CCNB3Q8WWL7 1395 aa21.9■■□□□ 1.1
NEDD4L-228ENST00000590248 HNRNPMP52272 730 aaKnown RBP eCLIP21.9■■□□□ 1.1
NEDD4L-228ENST00000590248 CFDP1Q9UEE9 299 aaPredicted RBP21.89■■□□□ 1.09
NEDD4L-228ENST00000590248 C9orf84Q5VXU9 1444 aa21.89■■□□□ 1.09
NEDD4L-228ENST00000590248 EHBP1L1Q8N3D4 1523 aa21.88■■□□□ 1.09
NEDD4L-228ENST00000590248 ABCA6Q8N139 1617 aa21.87■■□□□ 1.09
NEDD4L-228ENST00000590248 DIP2CQ9Y2E4 1556 aa21.87■■□□□ 1.09
NEDD4L-228ENST00000590248 SYCP2Q9BX26 1530 aa21.86■■□□□ 1.09
NEDD4L-228ENST00000590248 VPS8Q8N3P4 1428 aa21.86■■□□□ 1.09
NEDD4L-228ENST00000590248 FER1L4A9Z1Z3 1794 aa21.86■■□□□ 1.09
NEDD4L-228ENST00000590248 KIDINS220Q9ULH0 1771 aa21.86■■□□□ 1.09
NEDD4L-228ENST00000590248 MLH3Q9UHC1 1453 aa21.85■■□□□ 1.09
NEDD4L-228ENST00000590248 TIAM1Q13009 1591 aa21.85■■□□□ 1.09
NEDD4L-228ENST00000590248 ZNF644Q9H582 1327 aaPredicted RBP21.84■■□□□ 1.09
NEDD4L-228ENST00000590248 SUPT6HQ7KZ85 1726 aaKnown RBP21.8■■□□□ 1.08
NEDD4L-228ENST00000590248 SPAG9O60271 1321 aaKnown RBP21.79■■□□□ 1.08
NEDD4L-228ENST00000590248 NCOA2Q15596 1464 aa21.78■■□□□ 1.08
NEDD4L-228ENST00000590248 KANK4Q5T7N3 995 aaPredicted RBP21.77■■□□□ 1.08
NEDD4L-228ENST00000590248 KIAA1107Q9UPP5 1409 aa21.77■■□□□ 1.08
NEDD4L-228ENST00000590248 PLEKHH2Q8IVE3 1493 aa21.76■■□□□ 1.07
NEDD4L-228ENST00000590248 REREQ9P2R6 1566 aa21.75■■□□□ 1.07
NEDD4L-228ENST00000590248 CEBPAP49715 358 aaPredicted RBP21.75■■□□□ 1.07
NEDD4L-228ENST00000590248 LRRC9Q6ZRR7 1453 aa21.74■■□□□ 1.07
NEDD4L-228ENST00000590248 MBD5Q9P267 1494 aa21.71■■□□□ 1.07
NEDD4L-228ENST00000590248 ATP7AQ04656 1500 aa21.71■■□□□ 1.07
NEDD4L-228ENST00000590248 LMTK3Q96Q04 1460 aa21.7■■□□□ 1.06
NEDD4L-228ENST00000590248 AGLP35573 1532 aa21.7■■□□□ 1.06
NEDD4L-228ENST00000590248 INO80Q9ULG1 1556 aaPredicted RBP21.7■■□□□ 1.06
NEDD4L-228ENST00000590248 CAMSAP2Q08AD1 1489 aa21.67■■□□□ 1.06
NEDD4L-228ENST00000590248 HSPA2P54652 639 aa21.67■■□□□ 1.06
NEDD4L-228ENST00000590248 MAP3K1Q13233 1512 aa21.66■■□□□ 1.06
NEDD4L-228ENST00000590248 C3P01024 1663 aa21.64■■□□□ 1.05
NEDD4L-228ENST00000590248 ESF1Q9H501 851 aaKnown RBP21.64■■□□□ 1.05
NEDD4L-228ENST00000590248 A2MP01023 1474 aa21.64■■□□□ 1.05
NEDD4L-228ENST00000590248 SETD1BQ9UPS6 1966 aaKnown RBP21.62■■□□□ 1.05
NEDD4L-228ENST00000590248 APLP2Q06481 763 aa21.62■■□□□ 1.05
NEDD4L-228ENST00000590248 ADGBQ8N7X0 1667 aa21.62■■□□□ 1.05
NEDD4L-228ENST00000590248 GGT6Q6P531 493 aa21.6■■□□□ 1.05
NEDD4L-228ENST00000590248 PLXNC1O60486 1568 aa21.6■■□□□ 1.05
NEDD4L-228ENST00000590248 CCDC141Q6ZP82 1450 aa21.59■■□□□ 1.05
NEDD4L-228ENST00000590248 PREX1Q8TCU6 1659 aa21.58■■□□□ 1.05
NEDD4L-228ENST00000590248 RTEL1-TNFRSF6BF6WH68 1400 aa21.57■■□□□ 1.04
NEDD4L-228ENST00000590248 RSPH4AQ5TD94 716 aa21.57■■□□□ 1.04
NEDD4L-228ENST00000590248 CLTCQ00610 1675 aaKnown RBP21.56■■□□□ 1.04
NEDD4L-228ENST00000590248 ARHGEF5Q12774 1597 aa21.55■■□□□ 1.04
NEDD4L-228ENST00000590248 MYOM3Q5VTT5 1437 aa21.55■■□□□ 1.04
NEDD4L-228ENST00000590248 TSPY4P0CV99 314 aa21.54■■□□□ 1.04
NEDD4L-228ENST00000590248 TSPY10P0CW01 314 aa21.54■■□□□ 1.04
NEDD4L-228ENST00000590248 ZMYM3Q14202 1370 aa21.52■■□□□ 1.04
NEDD4L-228ENST00000590248 DHX29Q7Z478 1369 aaKnown RBP21.52■■□□□ 1.04
NEDD4L-228ENST00000590248 CNTLNQ9NXG0 1405 aa21.52■■□□□ 1.04
NEDD4L-228ENST00000590248 MROH2AA6NES4 1674 aa21.51■■□□□ 1.03
NEDD4L-228ENST00000590248 KIF3BO15066 747 aa21.51■■□□□ 1.03
NEDD4L-228ENST00000590248 MIA2Q96PC5 1412 aa21.5■■□□□ 1.03
NEDD4L-228ENST00000590248 ILDR1Q86SU0 546 aaPredicted RBP21.49■■□□□ 1.03
NEDD4L-228ENST00000590248 UHRF1BP1Q6BDS2 1440 aa21.48■■□□□ 1.03
NEDD4L-228ENST00000590248 PTPN23Q9H3S7 1636 aa21.46■■□□□ 1.03
NEDD4L-228ENST00000590248 STRCQ7RTU9 1775 aa21.45■■□□□ 1.02
NEDD4L-228ENST00000590248 MAST1Q9Y2H9 1570 aa21.44■■□□□ 1.02
NEDD4L-228ENST00000590248 PPP6R1Q9UPN7 881 aa21.42■■□□□ 1.02
NEDD4L-228ENST00000590248 ABCC5O15440 1437 aa21.39■■□□□ 1.02
NEDD4L-228ENST00000590248 PTPRKQ15262 1439 aa21.39■■□□□ 1.02
NEDD4L-228ENST00000590248 FGD6Q6ZV73 1430 aa21.39■■□□□ 1.02
NEDD4L-228ENST00000590248 NPATQ14207 1427 aa21.38■■□□□ 1.01
NEDD4L-228ENST00000590248 CROCC2H7BZ55 1655 aa21.38■■□□□ 1.01
NEDD4L-228ENST00000590248 WASHC2CQ9Y4E1 1318 aa21.37■■□□□ 1.01
NEDD4L-228ENST00000590248 CFAP65Q6ZU64 1925 aaKnown RBP21.36■■□□□ 1.01
NEDD4L-228ENST00000590248 FBXO31Q5XUX0 539 aaPredicted RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms