RNA–Protein interactions for RNA: ENST00000589933.1

TMC6-213, Transcript of transmembrane channel like 6, humanhuman

TSL 3

Gene TMC6, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-213ENST00000589933 POGZQ7Z3K3 1410 aa34.38■■■■□ 3.09
TMC6-213ENST00000589933 SCAPERQ9BY12 1400 aa34.37■■■■□ 3.09
TMC6-213ENST00000589933 MADDQ8WXG6 1647 aa34.34■■■■□ 3.09
TMC6-213ENST00000589933 LRRIQ1Q96JM4 1722 aa34.32■■■■□ 3.08
TMC6-213ENST00000589933 CCDC18Q5T9S5 1454 aa34.3■■■■□ 3.08
TMC6-213ENST00000589933 ARHGAP5Q13017 1502 aa34.28■■■■□ 3.08
TMC6-213ENST00000589933 CASKIN1Q8WXD9 1431 aa34.28■■■■□ 3.08
TMC6-213ENST00000589933 RIMS1Q86UR5 1692 aaKnown RBP34.27■■■■□ 3.08
TMC6-213ENST00000589933 PCF11O94913 1555 aaKnown RBP34.25■■■■□ 3.07
TMC6-213ENST00000589933 YEATS2Q9ULM3 1422 aa34.25■■■■□ 3.07
TMC6-213ENST00000589933 ZNF518AQ6AHZ1 1483 aa34.2■■■■□ 3.06
TMC6-213ENST00000589933 ATP10AO60312 1499 aa34.17■■■■□ 3.06
TMC6-213ENST00000589933 MYT1LQ9UL68 1186 aa34.17■■■■□ 3.06
TMC6-213ENST00000589933 CDC42BPBQ9Y5S2 1711 aa34.16■■■■□ 3.06
TMC6-213ENST00000589933 FYCO1Q9BQS8 1478 aa34.16■■■■□ 3.06
TMC6-213ENST00000589933 C9orf84Q5VXU9 1444 aa34.14■■■■□ 3.06
TMC6-213ENST00000589933 FER1L4A9Z1Z3 1794 aa34.14■■■■□ 3.06
TMC6-213ENST00000589933 ILDR1Q86SU0 546 aaPredicted RBP34.14■■■■□ 3.06
TMC6-213ENST00000589933 MLECQ14165 292 aa34.13■■■■□ 3.05
TMC6-213ENST00000589933 PREX2Q70Z35 1606 aa34.12■■■■□ 3.05
TMC6-213ENST00000589933 SIGLEC1Q9BZZ2 1709 aa34.11■■■■□ 3.05
TMC6-213ENST00000589933 KDM5CP41229 1560 aa34.08■■■■□ 3.05
TMC6-213ENST00000589933 PLPPR3Q6T4P5 718 aa34.08■■■■□ 3.05
TMC6-213ENST00000589933 AFAP1Q8N556 730 aa34.07■■■■□ 3.04
TMC6-213ENST00000589933 CDC42BPAQ5VT25 1732 aa34.04■■■■□ 3.04
TMC6-213ENST00000589933 LMTK3Q96Q04 1460 aa34.01■■■■□ 3.04
TMC6-213ENST00000589933 ITSN2Q9NZM3 1697 aa33.99■■■■□ 3.03
TMC6-213ENST00000589933 ABCC1P33527 1531 aa33.99■■■■□ 3.03
TMC6-213ENST00000589933 ARHGEF12Q9NZN5 1544 aa33.99■■■■□ 3.03
TMC6-213ENST00000589933 MLH3Q9UHC1 1453 aa33.97■■■■□ 3.03
TMC6-213ENST00000589933 DIP2CQ9Y2E4 1556 aa33.95■■■■□ 3.03
TMC6-213ENST00000589933 REREQ9P2R6 1566 aa33.94■■■■□ 3.02
TMC6-213ENST00000589933 TRAPPC8Q9Y2L5 1435 aa33.91■■■■□ 3.02
TMC6-213ENST00000589933 ZNF777Q9ULD5 760 aaPredicted RBP33.91■■■■□ 3.02
TMC6-213ENST00000589933 ABCA6Q8N139 1617 aa33.9■■■■□ 3.02
TMC6-213ENST00000589933 MTUS2Q5JR59 1369 aa33.88■■■■□ 3.01
TMC6-213ENST00000589933 ESF1Q9H501 851 aaKnown RBP33.88■■■■□ 3.01
TMC6-213ENST00000589933 SETD1BQ9UPS6 1966 aaKnown RBP33.85■■■■□ 3.01
TMC6-213ENST00000589933 HSPA2P54652 639 aa33.85■■■■□ 3.01
TMC6-213ENST00000589933 CCNB3Q8WWL7 1395 aa33.85■■■■□ 3.01
TMC6-213ENST00000589933 GPATCH8Q9UKJ3 1502 aaKnown RBP33.84■■■■□ 3.01
TMC6-213ENST00000589933 PREX1Q8TCU6 1659 aa33.84■■■■□ 3.01
TMC6-213ENST00000589933 KIDINS220Q9ULH0 1771 aa33.83■■■■□ 3.01
TMC6-213ENST00000589933 AGLP35573 1532 aa33.83■■■■□ 3.01
TMC6-213ENST00000589933 SAMD9LQ8IVG5 1584 aa33.82■■■■□ 3
TMC6-213ENST00000589933 CFDP1Q9UEE9 299 aaPredicted RBP33.82■■■■□ 3
TMC6-213ENST00000589933 PLEKHH2Q8IVE3 1493 aa33.82■■■■□ 3
TMC6-213ENST00000589933 SYCP2Q9BX26 1530 aa33.79■■■■□ 3
TMC6-213ENST00000589933 CEBPAP49715 358 aaPredicted RBP33.78■■■■□ 3
TMC6-213ENST00000589933 FBXO41Q8TF61 875 aa33.77■■■■□ 3
TMC6-213ENST00000589933 SPAG9O60271 1321 aaKnown RBP33.77■■■■□ 3
TMC6-213ENST00000589933 CEP162Q5TB80 1403 aa33.76■■■□□ 2.99
TMC6-213ENST00000589933 KIAA1107Q9UPP5 1409 aa33.75■■■□□ 2.99
TMC6-213ENST00000589933 HNRNPMP52272 730 aaKnown RBP eCLIP33.74■■■□□ 2.99
TMC6-213ENST00000589933 EHBP1L1Q8N3D4 1523 aa33.74■■■□□ 2.99
TMC6-213ENST00000589933 UHRF1BP1Q6BDS2 1440 aa33.7■■■□□ 2.99
TMC6-213ENST00000589933 C3P01024 1663 aa33.7■■■□□ 2.99
TMC6-213ENST00000589933 CNTLNQ9NXG0 1405 aa33.7■■■□□ 2.98
TMC6-213ENST00000589933 ATP7AQ04656 1500 aa33.68■■■□□ 2.98
TMC6-213ENST00000589933 SUPT6HQ7KZ85 1726 aaKnown RBP33.65■■■□□ 2.98
TMC6-213ENST00000589933 TIAM1Q13009 1591 aa33.63■■■□□ 2.97
TMC6-213ENST00000589933 DMRT2Q9Y5R5 561 aa33.62■■■□□ 2.97
TMC6-213ENST00000589933 INO80Q9ULG1 1556 aaPredicted RBP33.61■■■□□ 2.97
TMC6-213ENST00000589933 MROH2AA6NES4 1674 aa33.58■■■□□ 2.97
TMC6-213ENST00000589933 A2MP01023 1474 aa33.57■■■□□ 2.97
TMC6-213ENST00000589933 ADGBQ8N7X0 1667 aa33.57■■■□□ 2.96
TMC6-213ENST00000589933 PLXNC1O60486 1568 aa33.51■■■□□ 2.96
TMC6-213ENST00000589933 ZNF644Q9H582 1327 aaPredicted RBP33.51■■■□□ 2.95
TMC6-213ENST00000589933 STRCQ7RTU9 1775 aa33.5■■■□□ 2.95
TMC6-213ENST00000589933 ZMYM3Q14202 1370 aa33.47■■■□□ 2.95
TMC6-213ENST00000589933 NPATQ14207 1427 aa33.47■■■□□ 2.95
TMC6-213ENST00000589933 RSPH4AQ5TD94 716 aa33.47■■■□□ 2.95
TMC6-213ENST00000589933 CERKQ8TCT0 537 aa33.47■■■□□ 2.95
TMC6-213ENST00000589933 NCOA2Q15596 1464 aa33.47■■■□□ 2.95
TMC6-213ENST00000589933 CLTCQ00610 1675 aaKnown RBP33.47■■■□□ 2.95
TMC6-213ENST00000589933 RTEL1-TNFRSF6BF6WH68 1400 aa33.46■■■□□ 2.95
TMC6-213ENST00000589933 MBD5Q9P267 1494 aa33.46■■■□□ 2.95
TMC6-213ENST00000589933 GGT6Q6P531 493 aa33.46■■■□□ 2.95
TMC6-213ENST00000589933 PPP6R1Q9UPN7 881 aa33.46■■■□□ 2.95
TMC6-213ENST00000589933 VPS8Q8N3P4 1428 aa33.44■■■□□ 2.94
TMC6-213ENST00000589933 CCDC141Q6ZP82 1450 aa33.4■■■□□ 2.94
TMC6-213ENST00000589933 LOC105371045A0A1W2PR82 267 aa33.4■■■□□ 2.94
TMC6-213ENST00000589933 CAMSAP2Q08AD1 1489 aa33.39■■■□□ 2.94
TMC6-213ENST00000589933 PTPRTO14522 1441 aa33.36■■■□□ 2.93
TMC6-213ENST00000589933 DHX29Q7Z478 1369 aaKnown RBP33.35■■■□□ 2.93
TMC6-213ENST00000589933 TSPY4P0CV99 314 aa33.33■■■□□ 2.93
TMC6-213ENST00000589933 TSPY10P0CW01 314 aa33.33■■■□□ 2.93
TMC6-213ENST00000589933 LRRC9Q6ZRR7 1453 aa33.32■■■□□ 2.92
TMC6-213ENST00000589933 ARHGEF5Q12774 1597 aa33.3■■■□□ 2.92
TMC6-213ENST00000589933 NCOA1Q15788 1441 aa33.29■■■□□ 2.92
TMC6-213ENST00000589933 MAP3K1Q13233 1512 aa33.28■■■□□ 2.92
TMC6-213ENST00000589933 CAMSAP1Q5T5Y3 1602 aa33.28■■■□□ 2.92
TMC6-213ENST00000589933 KIF3BO15066 747 aa33.28■■■□□ 2.92
TMC6-213ENST00000589933 MYO3AQ8NEV4 1616 aa33.28■■■□□ 2.92
TMC6-213ENST00000589933 PTPRKQ15262 1439 aa33.27■■■□□ 2.92
TMC6-213ENST00000589933 ZNF142P52746 1687 aaPredicted RBP33.26■■■□□ 2.92
TMC6-213ENST00000589933 FAM135AQ9P2D6 1515 aa33.23■■■□□ 2.91
TMC6-213ENST00000589933 APLP2Q06481 763 aa33.22■■■□□ 2.91
TMC6-213ENST00000589933 CEP170BQ9Y4F5 1589 aaPredicted RBP33.21■■■□□ 2.91
TMC6-213ENST00000589933 KDM5DQ9BY66 1539 aa33.18■■■□□ 2.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms