RNA–Protein interactions for RNA: ENST00000589553.5

TMC6-212, Transcript of transmembrane channel like 6, humanhuman

TSL 2 BASIC

Gene TMC6, Length 2,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-212ENST00000589553 CHMP7Q8WUX9 453 aaPredicted RBP29.54■■■□□ 2.32
TMC6-212ENST00000589553 PRG4Q92954 1404 aaPredicted RBP29.54■■■□□ 2.32
TMC6-212ENST00000589553 ROCK1Q13464 1354 aa29.54■■■□□ 2.32
TMC6-212ENST00000589553 PLB1Q6P1J6 1458 aa29.53■■■□□ 2.32
TMC6-212ENST00000589553 CDK11AQ9UQ88 783 aaPredicted RBP29.52■■■□□ 2.32
TMC6-212ENST00000589553 SYNJ2O15056 1496 aa29.51■■■□□ 2.32
TMC6-212ENST00000589553 FBLN2P98095 1184 aa29.51■■■□□ 2.31
TMC6-212ENST00000589553 HSPA5P11021 654 aaKnown RBP29.49■■■□□ 2.31
TMC6-212ENST00000589553 TROQ12816 1431 aaPredicted RBP29.48■■■□□ 2.31
TMC6-212ENST00000589553 L3MBTL2Q969R5 705 aa29.48■■■□□ 2.31
TMC6-212ENST00000589553 WASHC2AQ641Q2 1341 aa29.44■■■□□ 2.3
TMC6-212ENST00000589553 KIF14Q15058 1648 aa29.43■■■□□ 2.3
TMC6-212ENST00000589553 CAMSAP2Q08AD1 1489 aa29.43■■■□□ 2.3
TMC6-212ENST00000589553 ANKRD30BQ9BXX2 1392 aa29.43■■■□□ 2.3
TMC6-212ENST00000589553 CFDP1Q9UEE9 299 aaPredicted RBP29.4■■■□□ 2.3
TMC6-212ENST00000589553 RPRD2Q5VT52 1461 aaKnown RBP29.39■■■□□ 2.3
TMC6-212ENST00000589553 GPATCH8Q9UKJ3 1502 aaKnown RBP29.39■■■□□ 2.3
TMC6-212ENST00000589553 NUP160Q12769 1436 aa29.38■■■□□ 2.29
TMC6-212ENST00000589553 EIF4G2P78344 907 aaKnown RBP eCLIP29.38■■■□□ 2.298e-11■□□□□ 9.7
TMC6-212ENST00000589553 JPH4Q96JJ6 628 aa29.38■■■□□ 2.29
TMC6-212ENST00000589553 ITSN2Q9NZM3 1697 aa29.38■■■□□ 2.29
TMC6-212ENST00000589553 SLC4A1APQ9BWU0 796 aaKnown RBP29.38■■■□□ 2.29
TMC6-212ENST00000589553 ZNF777Q9ULD5 760 aaPredicted RBP29.36■■■□□ 2.29
TMC6-212ENST00000589553 CARMIL2Q6F5E8 1435 aa29.36■■■□□ 2.29
TMC6-212ENST00000589553 TEX14Q8IWB6 1497 aa29.35■■■□□ 2.29
TMC6-212ENST00000589553 ADCY10Q96PN6 1610 aa29.35■■■□□ 2.29
TMC6-212ENST00000589553 NBPF8Q3BBV2 869 aa29.33■■■□□ 2.29
TMC6-212ENST00000589553 NCOA1Q15788 1441 aa29.31■■■□□ 2.28
TMC6-212ENST00000589553 PZPP20742 1482 aa29.31■■■□□ 2.28
TMC6-212ENST00000589553 BCANQ96GW7 911 aa29.31■■■□□ 2.28
TMC6-212ENST00000589553 FKBP8Q14318 412 aa29.31■■■□□ 2.28
TMC6-212ENST00000589553 ADGBQ8N7X0 1667 aa29.3■■■□□ 2.28
TMC6-212ENST00000589553 CROCC2H7BZ55 1655 aa29.28■■■□□ 2.28
TMC6-212ENST00000589553 C11orf95C9JLR9 678 aaPredicted RBP29.27■■■□□ 2.28
TMC6-212ENST00000589553 ADGRL2O95490 1459 aa29.24■■■□□ 2.27
TMC6-212ENST00000589553 ABCA8O94911 1581 aa29.24■■■□□ 2.27
TMC6-212ENST00000589553 CNTLNQ9NXG0 1405 aa29.23■■■□□ 2.27
TMC6-212ENST00000589553 CCDC7Q96M83 1385 aa29.21■■■□□ 2.27
TMC6-212ENST00000589553 CDC42BPAQ5VT25 1732 aa29.2■■■□□ 2.27
TMC6-212ENST00000589553 ATP10BO94823 1461 aa29.2■■■□□ 2.26
TMC6-212ENST00000589553 PLEKHD1A6NEE1 506 aa29.18■■■□□ 2.26
TMC6-212ENST00000589553 ANKRD30AQ9BXX3 1397 aa29.17■■■□□ 2.26
TMC6-212ENST00000589553 ABCC10Q5T3U5 1492 aa29.17■■■□□ 2.26
TMC6-212ENST00000589553 TSHZ2Q9NRE2 1034 aa29.16■■■□□ 2.26
TMC6-212ENST00000589553 KIAA1107Q9UPP5 1409 aa29.15■■■□□ 2.26
TMC6-212ENST00000589553 SPATA31E1Q6ZUB1 1445 aa29.15■■■□□ 2.26
TMC6-212ENST00000589553 HNRNPUQ00839 825 aaKnown RBP eCLIP29.15■■■□□ 2.26
TMC6-212ENST00000589553 NEFLP07196 543 aa29.13■■■□□ 2.25
TMC6-212ENST00000589553 ANKRD50Q9ULJ7 1429 aa29.13■■■□□ 2.25
TMC6-212ENST00000589553 PKD2Q13563 968 aa29.12■■■□□ 2.25
TMC6-212ENST00000589553 CCDC184Q52MB2 194 aa29.12■■■□□ 2.25
TMC6-212ENST00000589553 MBD5Q9P267 1494 aa29.1■■■□□ 2.25
TMC6-212ENST00000589553 KIF7Q2M1P5 1343 aa29.09■■■□□ 2.25
TMC6-212ENST00000589553 C9orf84Q5VXU9 1444 aa29.08■■■□□ 2.25
TMC6-212ENST00000589553 PRKRIP1Q9H875 184 aaPredicted RBP29.06■■■□□ 2.24
TMC6-212ENST00000589553 SHANK2Q9UPX8 1470 aa29.05■■■□□ 2.24
TMC6-212ENST00000589553 POLR1AO95602 1720 aaPredicted RBP29.04■■■□□ 2.24
TMC6-212ENST00000589553 ZNF326Q5BKZ1 582 aaKnown RBP29.04■■■□□ 2.24
TMC6-212ENST00000589553 NUP155O75694 1391 aa29.02■■■□□ 2.24
TMC6-212ENST00000589553 PTPRGP23470 1445 aa29■■■□□ 2.23
TMC6-212ENST00000589553 HNRNPMP52272 730 aaKnown RBP eCLIP29■■■□□ 2.232e-8■■■□□ 17
TMC6-212ENST00000589553 TSPY4P0CV99 314 aa28.97■■■□□ 2.23
TMC6-212ENST00000589553 TSPY10P0CW01 314 aa28.97■■■□□ 2.23
TMC6-212ENST00000589553 USP47Q96K76 1375 aa28.95■■■□□ 2.23
TMC6-212ENST00000589553 KIF15Q9NS87 1388 aa28.95■■■□□ 2.22
TMC6-212ENST00000589553 BCORL1Q5H9F3 1711 aa28.94■■■□□ 2.22
TMC6-212ENST00000589553 MRS2Q9HD23 443 aa28.94■■■□□ 2.22
TMC6-212ENST00000589553 FAM9BQ8IZU0 186 aa28.93■■■□□ 2.22
TMC6-212ENST00000589553 ARHGEF5Q12774 1597 aa28.92■■■□□ 2.22
TMC6-212ENST00000589553 KDM5DQ9BY66 1539 aa28.91■■■□□ 2.22
TMC6-212ENST00000589553 SAMD9LQ8IVG5 1584 aa28.91■■■□□ 2.22
TMC6-212ENST00000589553 CHD1O14646 1710 aa28.9■■■□□ 2.22
TMC6-212ENST00000589553 CDC42BPBQ9Y5S2 1711 aa28.9■■■□□ 2.22
TMC6-212ENST00000589553 KDM5CP41229 1560 aa28.89■■■□□ 2.22
TMC6-212ENST00000589553 PREX2Q70Z35 1606 aa28.88■■■□□ 2.21
TMC6-212ENST00000589553 POLR3GLQ9BT43 218 aa28.87■■■□□ 2.21
TMC6-212ENST00000589553 IRX6P78412 446 aaPredicted RBP28.86■■■□□ 2.21
TMC6-212ENST00000589553 CCDC141Q6ZP82 1450 aa28.85■■■□□ 2.21
TMC6-212ENST00000589553 UHRF1BP1Q6BDS2 1440 aa28.85■■■□□ 2.21
TMC6-212ENST00000589553 DHX29Q7Z478 1369 aaKnown RBP28.84■■■□□ 2.21
TMC6-212ENST00000589553 RALGAPBQ86X10 1494 aa28.83■■■□□ 2.21
TMC6-212ENST00000589553 CNGB1Q14028 1251 aaPredicted RBP28.83■■■□□ 2.21
TMC6-212ENST00000589553 ARHGEF12Q9NZN5 1544 aa28.81■■■□□ 2.2
TMC6-212ENST00000589553 TTC37Q6PGP7 1564 aa28.8■■■□□ 2.2
TMC6-212ENST00000589553 KDM2AQ9Y2K7 1162 aa28.8■■■□□ 2.2
TMC6-212ENST00000589553 SYCP2Q9BX26 1530 aa28.78■■■□□ 2.2
TMC6-212ENST00000589553 CARD11Q9BXL7 1154 aa28.77■■■□□ 2.2
TMC6-212ENST00000589553 ERCC6L2Q5T890 1561 aa28.77■■■□□ 2.2
TMC6-212ENST00000589553 FAM135AQ9P2D6 1515 aa28.77■■■□□ 2.2
TMC6-212ENST00000589553 SHROOM2Q13796 1616 aa28.76■■■□□ 2.2
TMC6-212ENST00000589553 ARHGAP5Q13017 1502 aa28.75■■■□□ 2.19
TMC6-212ENST00000589553 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.74■■■□□ 2.192e-7■■□□□ 14.2
TMC6-212ENST00000589553 ZBED9Q6R2W3 1325 aa28.74■■■□□ 2.19
TMC6-212ENST00000589553 DCAF11Q8TEB1 546 aa28.74■■■□□ 2.19
TMC6-212ENST00000589553 ARID4BQ4LE39 1312 aaPredicted RBP28.7■■■□□ 2.18
TMC6-212ENST00000589553 RSPH4AQ5TD94 716 aa28.69■■■□□ 2.18
TMC6-212ENST00000589553 ST20-MTHFSA0A0A6YYL1 179 aa28.68■■■□□ 2.18
TMC6-212ENST00000589553 ABCC2Q92887 1545 aa28.67■■■□□ 2.18
TMC6-212ENST00000589553 MAST1Q9Y2H9 1570 aa28.65■■■□□ 2.18
TMC6-212ENST00000589553 MYT1Q01538 1121 aa28.65■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms