RNA–Protein interactions for RNA: ENST00000588993.1

ZNF260-203, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF260, Length 4,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-203ENST00000588993 PLEKHH2Q8IVE3 1493 aa3.39□□□□□ -1.87
ZNF260-203ENST00000588993 NPM1P06748 294 aaKnown RBP eCLIP3.39□□□□□ -1.87
ZNF260-203ENST00000588993 UNC13BO14795 1591 aa3.39□□□□□ -1.87
ZNF260-203ENST00000588993 CERKQ8TCT0 537 aa3.39□□□□□ -1.87
ZNF260-203ENST00000588993 NEXMIFQ5QGS0 1516 aa3.39□□□□□ -1.87
ZNF260-203ENST00000588993 ARHGEF12Q9NZN5 1544 aa3.39□□□□□ -1.87
ZNF260-203ENST00000588993 ADCY10Q96PN6 1610 aa3.38□□□□□ -1.87
ZNF260-203ENST00000588993 ABCA8O94911 1581 aa3.38□□□□□ -1.87
ZNF260-203ENST00000588993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP3.38□□□□□ -1.87
ZNF260-203ENST00000588993 HNRNPUL2Q1KMD3 747 aaKnown RBP3.38□□□□□ -1.87
ZNF260-203ENST00000588993 ABCC2Q92887 1545 aa3.38□□□□□ -1.87
ZNF260-203ENST00000588993 POLR1AO95602 1720 aaPredicted RBP3.38□□□□□ -1.87
ZNF260-203ENST00000588993 ILDR2Q71H61 639 aa3.38□□□□□ -1.87
ZNF260-203ENST00000588993 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.38□□□□□ -1.87
ZNF260-203ENST00000588993 ABCC3O15438 1527 aa3.38□□□□□ -1.87
ZNF260-203ENST00000588993 LRRC9Q6ZRR7 1453 aa3.37□□□□□ -1.87
ZNF260-203ENST00000588993 MED1Q15648 1581 aaPredicted RBP3.37□□□□□ -1.87
ZNF260-203ENST00000588993 MROH2BQ7Z745 1585 aa3.37□□□□□ -1.87
ZNF260-203ENST00000588993 PTPN23Q9H3S7 1636 aa3.36□□□□□ -1.87
ZNF260-203ENST00000588993 NCBP3Q53F19 620 aaKnown RBP3.36□□□□□ -1.87
ZNF260-203ENST00000588993 SHPRHQ149N8 1683 aa3.36□□□□□ -1.87
ZNF260-203ENST00000588993 NPATQ14207 1427 aa3.36□□□□□ -1.87
ZNF260-203ENST00000588993 STRCQ7RTU9 1775 aa3.36□□□□□ -1.87
ZNF260-203ENST00000588993 SPINK5Q9NQ38 1064 aaPredicted RBP3.36□□□□□ -1.87
ZNF260-203ENST00000588993 CDK13Q14004 1512 aaKnown RBP3.35□□□□□ -1.87
ZNF260-203ENST00000588993 RICTORQ6R327 1708 aa3.35□□□□□ -1.87
ZNF260-203ENST00000588993 NPM3O75607 178 aaKnown RBP3.34□□□□□ -1.87
ZNF260-203ENST00000588993 FGD6Q6ZV73 1430 aa3.34□□□□□ -1.87
ZNF260-203ENST00000588993 CHMP7Q8WUX9 453 aaPredicted RBP3.34□□□□□ -1.87
ZNF260-203ENST00000588993 POTEIP0CG38 1075 aa3.33□□□□□ -1.88
ZNF260-203ENST00000588993 FAM69CQ0P6D2 419 aa3.33□□□□□ -1.88
ZNF260-203ENST00000588993 ARHGAP23Q9P227 1491 aa3.33□□□□□ -1.88
ZNF260-203ENST00000588993 QSER1Q2KHR3 1735 aa3.33□□□□□ -1.88
ZNF260-203ENST00000588993 ZC3H13Q5T200 1668 aaKnown RBP3.33□□□□□ -1.88
ZNF260-203ENST00000588993 RAPGEF6Q8TEU7 1601 aa3.33□□□□□ -1.88
ZNF260-203ENST00000588993 REM2Q8IYK8 340 aaPredicted RBP3.31□□□□□ -1.88
ZNF260-203ENST00000588993 DNMT1P26358 1616 aaKnown RBP3.31□□□□□ -1.88
ZNF260-203ENST00000588993 ZBTB12Q9Y330 459 aaPredicted RBP3.31□□□□□ -1.88
ZNF260-203ENST00000588993 PTPRMP28827 1452 aa3.31□□□□□ -1.88
ZNF260-203ENST00000588993 XIRP1Q702N8 1843 aaKnown RBP3.31□□□□□ -1.88
ZNF260-203ENST00000588993 NCOA3Q9Y6Q9 1424 aa3.31□□□□□ -1.88
ZNF260-203ENST00000588993 GRIN2AQ12879 1464 aa3.31□□□□□ -1.88
ZNF260-203ENST00000588993 POLA1P09884 1462 aaPredicted RBP3.31□□□□□ -1.88
ZNF260-203ENST00000588993 LCE2DQ5TA82 110 aaPredicted RBP3.3□□□□□ -1.88
ZNF260-203ENST00000588993 SAMD1Q6SPF0 538 aaPredicted RBP3.3□□□□□ -1.88
ZNF260-203ENST00000588993 UGGT2Q9NYU1 1516 aa3.3□□□□□ -1.88
ZNF260-203ENST00000588993 FRMPD1Q5SYB0 1578 aa3.3□□□□□ -1.88
ZNF260-203ENST00000588993 NEURL4Q96JN8 1562 aa3.3□□□□□ -1.88
ZNF260-203ENST00000588993 NWD1Q149M9 1564 aa3.3□□□□□ -1.88
ZNF260-203ENST00000588993 POGZQ7Z3K3 1410 aa3.3□□□□□ -1.88
ZNF260-203ENST00000588993 SOGA1O94964 1423 aa3.29□□□□□ -1.88
ZNF260-203ENST00000588993 CNTLNQ9NXG0 1405 aa3.29□□□□□ -1.88
ZNF260-203ENST00000588993 EVX2Q03828 476 aa3.28□□□□□ -1.88
ZNF260-203ENST00000588993 FHAD1B1AJZ9 1412 aa3.28□□□□□ -1.88
ZNF260-203ENST00000588993 YEATS2Q9ULM3 1422 aa3.28□□□□□ -1.88
ZNF260-203ENST00000588993 GRWD1Q9BQ67 446 aaKnown RBP eCLIP3.28□□□□□ -1.88
ZNF260-203ENST00000588993 FANCAO15360 1455 aa3.28□□□□□ -1.89
ZNF260-203ENST00000588993 FBLN2P98095 1184 aa3.27□□□□□ -1.89
ZNF260-203ENST00000588993 FHOD3Q2V2M9 1422 aa3.27□□□□□ -1.89
ZNF260-203ENST00000588993 PLSCR2Q9NRY7 297 aa3.27□□□□□ -1.89
ZNF260-203ENST00000588993 SETD1BQ9UPS6 1966 aaKnown RBP3.26□□□□□ -1.89
ZNF260-203ENST00000588993 COL22A1Q8NFW1 1626 aaPredicted RBP3.26□□□□□ -1.89
ZNF260-203ENST00000588993 ALKQ9UM73 1620 aa3.26□□□□□ -1.89
ZNF260-203ENST00000588993 HECW1Q76N89 1606 aa3.26□□□□□ -1.89
ZNF260-203ENST00000588993 GABBR2O75899 941 aa3.25□□□□□ -1.89
ZNF260-203ENST00000588993 RREB1Q92766 1687 aa3.25□□□□□ -1.89
ZNF260-203ENST00000588993 SSUH2Q9Y2M2 353 aa3.25□□□□□ -1.89
ZNF260-203ENST00000588993 PTPRKQ15262 1439 aa3.25□□□□□ -1.89
ZNF260-203ENST00000588993 PRG4Q92954 1404 aaPredicted RBP3.25□□□□□ -1.89
ZNF260-203ENST00000588993 MYO3AQ8NEV4 1616 aa3.25□□□□□ -1.89
ZNF260-203ENST00000588993 TSPOAP1O95153 1857 aa3.24□□□□□ -1.89
ZNF260-203ENST00000588993 PRAG1Q86YV5 1406 aa3.24□□□□□ -1.89
ZNF260-203ENST00000588993 POTEMA6NI47 508 aa3.24□□□□□ -1.89
ZNF260-203ENST00000588993 ATXN8OSP0DMR3 200 aa3.24□□□□□ -1.89
ZNF260-203ENST00000588993 TCOF1Q13428 1488 aaKnown RBP3.24□□□□□ -1.89
ZNF260-203ENST00000588993 IFFO2Q5TF58 517 aa3.24□□□□□ -1.89
ZNF260-203ENST00000588993 MROH1Q8NDA8 1641 aa3.23□□□□□ -1.89
ZNF260-203ENST00000588993 SLC34A2O95436 690 aa3.23□□□□□ -1.89
ZNF260-203ENST00000588993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP3.23□□□□□ -1.89
ZNF260-203ENST00000588993 LRP6O75581 1613 aa3.23□□□□□ -1.89
ZNF260-203ENST00000588993 AHDC1Q5TGY3 1603 aaPredicted RBP3.23□□□□□ -1.89
ZNF260-203ENST00000588993 NCOA2Q15596 1464 aa3.23□□□□□ -1.89
ZNF260-203ENST00000588993 SUPT6HQ7KZ85 1726 aaKnown RBP3.23□□□□□ -1.89
ZNF260-203ENST00000588993 KIF21BO75037 1637 aa3.23□□□□□ -1.89
ZNF260-203ENST00000588993 DIP2AQ14689 1571 aa3.23□□□□□ -1.89
ZNF260-203ENST00000588993 ZNF579Q8NAF0 562 aaKnown RBP3.23□□□□□ -1.89
ZNF260-203ENST00000588993 TIAM1Q13009 1591 aa3.22□□□□□ -1.89
ZNF260-203ENST00000588993 MARF1Q9Y4F3 1742 aaKnown RBP3.22□□□□□ -1.89
ZNF260-203ENST00000588993 FGD5Q6ZNL6 1462 aa3.22□□□□□ -1.89
ZNF260-203ENST00000588993 CTTNBP2Q8WZ74 1663 aa3.22□□□□□ -1.89
ZNF260-203ENST00000588993 PITPNM1O00562 1244 aa3.22□□□□□ -1.89
ZNF260-203ENST00000588993 OTUD5Q96G74 571 aa3.22□□□□□ -1.89
ZNF260-203ENST00000588993 CARMIL2Q6F5E8 1435 aa3.22□□□□□ -1.89
ZNF260-203ENST00000588993 ASXL2Q76L83 1435 aa3.22□□□□□ -1.89
ZNF260-203ENST00000588993 IQGAP2Q13576 1575 aa3.22□□□□□ -1.89
ZNF260-203ENST00000588993 AATKQ6ZMQ8 1374 aa3.22□□□□□ -1.89
ZNF260-203ENST00000588993 KIAA1210Q9ULL0 1709 aa3.22□□□□□ -1.89
ZNF260-203ENST00000588993 ZFYVE16Q7Z3T8 1539 aa3.21□□□□□ -1.89
ZNF260-203ENST00000588993 MADDQ8WXG6 1647 aa3.21□□□□□ -1.9
ZNF260-203ENST00000588993 USP32Q8NFA0 1604 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms