RNA–Protein interactions for RNA: ENST00000588812.5

CDK3-204, Transcript of cyclin dependent kinase 3, humanhuman

TSL 3

Gene CDK3, Length 570 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-204ENST00000588812 CFDP1Q9UEE9 299 aaPredicted RBP17.22■□□□□ 0.35
CDK3-204ENST00000588812 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
CDK3-204ENST00000588812 CFAP74Q9C0B2 1584 aa17.21■□□□□ 0.35
CDK3-204ENST00000588812 CDC42BPAQ5VT25 1732 aa17.21■□□□□ 0.35
CDK3-204ENST00000588812 CDC42BPBQ9Y5S2 1711 aa17.19■□□□□ 0.34
CDK3-204ENST00000588812 AKNAQ7Z591 1439 aa17.19■□□□□ 0.34
CDK3-204ENST00000588812 ITSN2Q9NZM3 1697 aa17.19■□□□□ 0.34
CDK3-204ENST00000588812 PPARGC1BQ86YN6 1023 aaKnown RBP17.18■□□□□ 0.34
CDK3-204ENST00000588812 MYOM3Q5VTT5 1437 aa17.17■□□□□ 0.34
CDK3-204ENST00000588812 ZNF777Q9ULD5 760 aaPredicted RBP17.16■□□□□ 0.34
CDK3-204ENST00000588812 MIA2Q96PC5 1412 aa17.15■□□□□ 0.34
CDK3-204ENST00000588812 KDM6BO15054 1643 aa17.14■□□□□ 0.33
CDK3-204ENST00000588812 ADGRL1O94910 1474 aa17.14■□□□□ 0.33
CDK3-204ENST00000588812 COL17A1Q9UMD9 1497 aaPredicted RBP17.14■□□□□ 0.33
CDK3-204ENST00000588812 PLEKHH2Q8IVE3 1493 aa17.13■□□□□ 0.33
CDK3-204ENST00000588812 SCAPERQ9BY12 1400 aa17.13■□□□□ 0.33
CDK3-204ENST00000588812 DENND4BO75064 1496 aaPredicted RBP17.12■□□□□ 0.33
CDK3-204ENST00000588812 KIAA1107Q9UPP5 1409 aa17.11■□□□□ 0.33
CDK3-204ENST00000588812 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
CDK3-204ENST00000588812 ZNF644Q9H582 1327 aaPredicted RBP17.1■□□□□ 0.33
CDK3-204ENST00000588812 FGD6Q6ZV73 1430 aa17.1■□□□□ 0.33
CDK3-204ENST00000588812 ABCC1P33527 1531 aa17.1■□□□□ 0.33
CDK3-204ENST00000588812 RAPGEF3O95398 923 aa17.08■□□□□ 0.32
CDK3-204ENST00000588812 CAMSAP2Q08AD1 1489 aa17.07■□□□□ 0.32
CDK3-204ENST00000588812 HNRNPMP52272 730 aaKnown RBP eCLIP17.07■□□□□ 0.32
CDK3-204ENST00000588812 POGZQ7Z3K3 1410 aa17.06■□□□□ 0.32
CDK3-204ENST00000588812 SYCP2Q9BX26 1530 aa17.06■□□□□ 0.32
CDK3-204ENST00000588812 ARHGEF12Q9NZN5 1544 aa17.06■□□□□ 0.32
CDK3-204ENST00000588812 ZNF518AQ6AHZ1 1483 aa17.05■□□□□ 0.32
CDK3-204ENST00000588812 RSPH4AQ5TD94 716 aa17.05■□□□□ 0.32
CDK3-204ENST00000588812 PTPN23Q9H3S7 1636 aa17.04■□□□□ 0.32
CDK3-204ENST00000588812 AFAP1Q8N556 730 aa17.04■□□□□ 0.32
CDK3-204ENST00000588812 TCOF1Q13428 1488 aaKnown RBP17.04■□□□□ 0.32
CDK3-204ENST00000588812 RICTORQ6R327 1708 aa17.03■□□□□ 0.32
CDK3-204ENST00000588812 MBD5Q9P267 1494 aa17.03■□□□□ 0.32
CDK3-204ENST00000588812 TRAPPC8Q9Y2L5 1435 aa17.03■□□□□ 0.32
CDK3-204ENST00000588812 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.31
CDK3-204ENST00000588812 FAM50AQ14320 339 aaKnown RBP17.01■□□□□ 0.31
CDK3-204ENST00000588812 ARHGEF5Q12774 1597 aa17■□□□□ 0.31
CDK3-204ENST00000588812 ZMYM4Q5VZL5 1548 aa17■□□□□ 0.31
CDK3-204ENST00000588812 CCDC141Q6ZP82 1450 aa16.99■□□□□ 0.31
CDK3-204ENST00000588812 MAGI2Q86UL8 1455 aa16.99■□□□□ 0.31
CDK3-204ENST00000588812 KDM5CP41229 1560 aa16.99■□□□□ 0.31
CDK3-204ENST00000588812 TSPY4P0CV99 314 aa16.99■□□□□ 0.31
CDK3-204ENST00000588812 TSPY10P0CW01 314 aa16.99■□□□□ 0.31
CDK3-204ENST00000588812 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.99■□□□□ 0.31
CDK3-204ENST00000588812 SPAG9O60271 1321 aaKnown RBP16.98■□□□□ 0.31
CDK3-204ENST00000588812 RRBP1Q9P2E9 1410 aaKnown RBP16.98■□□□□ 0.31
CDK3-204ENST00000588812 MYT1LQ9UL68 1186 aa16.97■□□□□ 0.31
CDK3-204ENST00000588812 MLH3Q9UHC1 1453 aa16.97■□□□□ 0.31
CDK3-204ENST00000588812 KDM4FA0A1W2PPD8 638 aa16.96■□□□□ 0.31
CDK3-204ENST00000588812 HECW2Q9P2P5 1572 aa16.94■□□□□ 0.3
CDK3-204ENST00000588812 ZFYVE16Q7Z3T8 1539 aa16.94■□□□□ 0.3
CDK3-204ENST00000588812 RTEL1-TNFRSF6BF6WH68 1400 aa16.94■□□□□ 0.3
CDK3-204ENST00000588812 ABCC5O15440 1437 aa16.94■□□□□ 0.3
CDK3-204ENST00000588812 DNMT1P26358 1616 aaKnown RBP16.93■□□□□ 0.3
CDK3-204ENST00000588812 DAPK1P53355 1430 aa16.93■□□□□ 0.3
CDK3-204ENST00000588812 ATP7AQ04656 1500 aa16.91■□□□□ 0.3
CDK3-204ENST00000588812 C9orf84Q5VXU9 1444 aa16.91■□□□□ 0.3
CDK3-204ENST00000588812 YEATS2Q9ULM3 1422 aa16.91■□□□□ 0.3
CDK3-204ENST00000588812 SHANK2Q9UPX8 1470 aa16.91■□□□□ 0.3
CDK3-204ENST00000588812 ARHGEF40Q8TER5 1519 aa16.91■□□□□ 0.3
CDK3-204ENST00000588812 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
CDK3-204ENST00000588812 AEBP2Q6ZN18 517 aaPredicted RBP16.9■□□□□ 0.3
CDK3-204ENST00000588812 MAST1Q9Y2H9 1570 aa16.89■□□□□ 0.3
CDK3-204ENST00000588812 KIDINS220Q9ULH0 1771 aa16.89■□□□□ 0.3
CDK3-204ENST00000588812 ATP10AO60312 1499 aa16.89■□□□□ 0.29
CDK3-204ENST00000588812 CROCC2H7BZ55 1655 aa16.88■□□□□ 0.29
CDK3-204ENST00000588812 ITGAEP38570 1179 aa16.87■□□□□ 0.29
CDK3-204ENST00000588812 DIP2CQ9Y2E4 1556 aa16.86■□□□□ 0.29
CDK3-204ENST00000588812 CHIC2Q9UKJ5 165 aa16.86■□□□□ 0.29
CDK3-204ENST00000588812 ABCA6Q8N139 1617 aa16.85■□□□□ 0.29
CDK3-204ENST00000588812 ANKRD30AQ9BXX3 1397 aa16.85■□□□□ 0.29
CDK3-204ENST00000588812 PLXNC1O60486 1568 aa16.83■□□□□ 0.28
CDK3-204ENST00000588812 ADGRL2O95490 1459 aa16.83■□□□□ 0.28
CDK3-204ENST00000588812 PTPRKQ15262 1439 aa16.83■□□□□ 0.28
CDK3-204ENST00000588812 REREQ9P2R6 1566 aa16.83■□□□□ 0.28
CDK3-204ENST00000588812 ADGBQ8N7X0 1667 aa16.82■□□□□ 0.28
CDK3-204ENST00000588812 A2MP01023 1474 aa16.82■□□□□ 0.28
CDK3-204ENST00000588812 NCOA1Q15788 1441 aa16.82■□□□□ 0.28
CDK3-204ENST00000588812 ROCK1Q13464 1354 aa16.81■□□□□ 0.28
CDK3-204ENST00000588812 DHX29Q7Z478 1369 aaKnown RBP16.81■□□□□ 0.28
CDK3-204ENST00000588812 KIF15Q9NS87 1388 aa16.81■□□□□ 0.28
CDK3-204ENST00000588812 ARID4BQ4LE39 1312 aaPredicted RBP16.81■□□□□ 0.28
CDK3-204ENST00000588812 RRP7BPQ9NSQ0 103 aa16.81■□□□□ 0.28
CDK3-204ENST00000588812 DUOX2Q9NRD8 1548 aa16.79■□□□□ 0.28
CDK3-204ENST00000588812 AGLP35573 1532 aa16.78■□□□□ 0.28
CDK3-204ENST00000588812 ERBINQ96RT1 1412 aa16.74■□□□□ 0.27
CDK3-204ENST00000588812 SIGLEC1Q9BZZ2 1709 aa16.73■□□□□ 0.27
CDK3-204ENST00000588812 KIF3BO15066 747 aa16.73■□□□□ 0.27
CDK3-204ENST00000588812 ANKRD50Q9ULJ7 1429 aa16.72■□□□□ 0.27
CDK3-204ENST00000588812 EIF2AK4Q9P2K8 1649 aaKnown RBP16.71■□□□□ 0.27
CDK3-204ENST00000588812 TRIM26Q12899 539 aaPredicted RBP16.71■□□□□ 0.27
CDK3-204ENST00000588812 MLECQ14165 292 aa16.71■□□□□ 0.27
CDK3-204ENST00000588812 PPP6R1Q9UPN7 881 aa16.7■□□□□ 0.26
CDK3-204ENST00000588812 BCORL1Q5H9F3 1711 aa16.7■□□□□ 0.26
CDK3-204ENST00000588812 HFM1A2PYH4 1435 aa16.7■□□□□ 0.26
CDK3-204ENST00000588812 GGT6Q6P531 493 aa16.69■□□□□ 0.26
CDK3-204ENST00000588812 NAIPQ13075 1403 aa16.69■□□□□ 0.26
CDK3-204ENST00000588812 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 138.2 ms