RNA–Protein interactions for RNA: ENST00000588802.5

APOC1-203, Transcript of apolipoprotein C1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOC1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-203ENST00000588802 ADAMTSL3P82987 1691 aa16.26■□□□□ 0.19
APOC1-203ENST00000588802 TROQ12816 1431 aaPredicted RBP16.26■□□□□ 0.19
APOC1-203ENST00000588802 ZMYM4Q5VZL5 1548 aa16.25■□□□□ 0.19
APOC1-203ENST00000588802 ILDR1Q86SU0 546 aaPredicted RBP16.25■□□□□ 0.19
APOC1-203ENST00000588802 CLIP1P30622 1438 aa16.25■□□□□ 0.19
APOC1-203ENST00000588802 POGZQ7Z3K3 1410 aa16.25■□□□□ 0.19
APOC1-203ENST00000588802 BCORL1Q5H9F3 1711 aa16.25■□□□□ 0.19
APOC1-203ENST00000588802 MADDQ8WXG6 1647 aa16.24■□□□□ 0.19
APOC1-203ENST00000588802 ZFYVE16Q7Z3T8 1539 aa16.24■□□□□ 0.19
APOC1-203ENST00000588802 ARHGAP5Q13017 1502 aa16.23■□□□□ 0.19
APOC1-203ENST00000588802 LRRIQ1Q96JM4 1722 aa16.22■□□□□ 0.19
APOC1-203ENST00000588802 PCF11O94913 1555 aaKnown RBP16.22■□□□□ 0.19
APOC1-203ENST00000588802 AFAP1Q8N556 730 aa16.22■□□□□ 0.19
APOC1-203ENST00000588802 CASKIN1Q8WXD9 1431 aa16.21■□□□□ 0.19
APOC1-203ENST00000588802 MYO5CQ9NQX4 1742 aa16.21■□□□□ 0.19
APOC1-203ENST00000588802 RIMS1Q86UR5 1692 aaKnown RBP16.19■□□□□ 0.18
APOC1-203ENST00000588802 CCDC18Q5T9S5 1454 aa16.19■□□□□ 0.18
APOC1-203ENST00000588802 ZNF777Q9ULD5 760 aaPredicted RBP16.18■□□□□ 0.18
APOC1-203ENST00000588802 SIGLEC1Q9BZZ2 1709 aa16.17■□□□□ 0.18
APOC1-203ENST00000588802 ATP10AO60312 1499 aa16.16■□□□□ 0.18
APOC1-203ENST00000588802 ZNF518AQ6AHZ1 1483 aa16.16■□□□□ 0.18
APOC1-203ENST00000588802 HSPA2P54652 639 aa16.15■□□□□ 0.18
APOC1-203ENST00000588802 C9orf84Q5VXU9 1444 aa16.13■□□□□ 0.17
APOC1-203ENST00000588802 CEBPAP49715 358 aaPredicted RBP16.13■□□□□ 0.17
APOC1-203ENST00000588802 FYCO1Q9BQS8 1478 aa16.12■□□□□ 0.17
APOC1-203ENST00000588802 TRAPPC8Q9Y2L5 1435 aa16.11■□□□□ 0.17
APOC1-203ENST00000588802 CDC42BPBQ9Y5S2 1711 aa16.11■□□□□ 0.17
APOC1-203ENST00000588802 ARHGEF12Q9NZN5 1544 aa16.1■□□□□ 0.17
APOC1-203ENST00000588802 LMTK3Q96Q04 1460 aa16.1■□□□□ 0.17
APOC1-203ENST00000588802 KDM5CP41229 1560 aa16.09■□□□□ 0.17
APOC1-203ENST00000588802 HNRNPMP52272 730 aaKnown RBP eCLIP16.08■□□□□ 0.16
APOC1-203ENST00000588802 MLH3Q9UHC1 1453 aa16.08■□□□□ 0.16
APOC1-203ENST00000588802 PREX2Q70Z35 1606 aa16.08■□□□□ 0.16
APOC1-203ENST00000588802 FER1L4A9Z1Z3 1794 aa16.07■□□□□ 0.16
APOC1-203ENST00000588802 ABCC1P33527 1531 aa16.06■□□□□ 0.16
APOC1-203ENST00000588802 DIP2CQ9Y2E4 1556 aa16.05■□□□□ 0.16
APOC1-203ENST00000588802 VPS8Q8N3P4 1428 aa16.05■□□□□ 0.16
APOC1-203ENST00000588802 MTUS2Q5JR59 1369 aa16.05■□□□□ 0.16
APOC1-203ENST00000588802 CFDP1Q9UEE9 299 aaPredicted RBP16.05■□□□□ 0.16
APOC1-203ENST00000588802 REREQ9P2R6 1566 aa16.04■□□□□ 0.16
APOC1-203ENST00000588802 ESF1Q9H501 851 aaKnown RBP16.04■□□□□ 0.16
APOC1-203ENST00000588802 CDC42BPAQ5VT25 1732 aa16.04■□□□□ 0.16
APOC1-203ENST00000588802 GPATCH8Q9UKJ3 1502 aaKnown RBP16.04■□□□□ 0.16
APOC1-203ENST00000588802 CCNB3Q8WWL7 1395 aa16.03■□□□□ 0.16
APOC1-203ENST00000588802 ITSN2Q9NZM3 1697 aa16.03■□□□□ 0.16
APOC1-203ENST00000588802 ABCA6Q8N139 1617 aa16.03■□□□□ 0.16
APOC1-203ENST00000588802 SPAG9O60271 1321 aaKnown RBP16.01■□□□□ 0.15
APOC1-203ENST00000588802 SYCP2Q9BX26 1530 aa16.01■□□□□ 0.15
APOC1-203ENST00000588802 SAMD9LQ8IVG5 1584 aa16■□□□□ 0.15
APOC1-203ENST00000588802 AGLP35573 1532 aa16■□□□□ 0.15
APOC1-203ENST00000588802 KIAA1107Q9UPP5 1409 aa16■□□□□ 0.15
APOC1-203ENST00000588802 ZNF644Q9H582 1327 aaPredicted RBP15.99■□□□□ 0.15
APOC1-203ENST00000588802 PLEKHH2Q8IVE3 1493 aa15.99■□□□□ 0.15
APOC1-203ENST00000588802 FBXO41Q8TF61 875 aa15.99■□□□□ 0.15
APOC1-203ENST00000588802 KIDINS220Q9ULH0 1771 aa15.98■□□□□ 0.15
APOC1-203ENST00000588802 SETD1BQ9UPS6 1966 aaKnown RBP15.96■□□□□ 0.15
APOC1-203ENST00000588802 CNTLNQ9NXG0 1405 aa15.95■□□□□ 0.14
APOC1-203ENST00000588802 PPARGC1BQ86YN6 1023 aaKnown RBP15.95■□□□□ 0.14
APOC1-203ENST00000588802 GGT6Q6P531 493 aa15.93■□□□□ 0.14
APOC1-203ENST00000588802 DMRT2Q9Y5R5 561 aa15.93■□□□□ 0.14
APOC1-203ENST00000588802 EHBP1L1Q8N3D4 1523 aa15.93■□□□□ 0.14
APOC1-203ENST00000588802 UHRF1BP1Q6BDS2 1440 aa15.93■□□□□ 0.14
APOC1-203ENST00000588802 TIAM1Q13009 1591 aa15.92■□□□□ 0.14
APOC1-203ENST00000588802 ATP7AQ04656 1500 aa15.91■□□□□ 0.14
APOC1-203ENST00000588802 PPP6R1Q9UPN7 881 aa15.91■□□□□ 0.14
APOC1-203ENST00000588802 PREX1Q8TCU6 1659 aa15.91■□□□□ 0.14
APOC1-203ENST00000588802 SUPT6HQ7KZ85 1726 aaKnown RBP15.91■□□□□ 0.14
APOC1-203ENST00000588802 C3P01024 1663 aa15.89■□□□□ 0.13
APOC1-203ENST00000588802 A2MP01023 1474 aa15.89■□□□□ 0.13
APOC1-203ENST00000588802 RSPH4AQ5TD94 716 aa15.88■□□□□ 0.13
APOC1-203ENST00000588802 NCOA2Q15596 1464 aa15.87■□□□□ 0.13
APOC1-203ENST00000588802 CERKQ8TCT0 537 aa15.87■□□□□ 0.13
APOC1-203ENST00000588802 ZMYM3Q14202 1370 aa15.87■□□□□ 0.13
APOC1-203ENST00000588802 NPATQ14207 1427 aa15.86■□□□□ 0.13
APOC1-203ENST00000588802 PCGF6Q9BYE7 350 aa15.86■□□□□ 0.13
APOC1-203ENST00000588802 INO80Q9ULG1 1556 aaPredicted RBP15.86■□□□□ 0.13
APOC1-203ENST00000588802 RTEL1-TNFRSF6BF6WH68 1400 aa15.85■□□□□ 0.13
APOC1-203ENST00000588802 MBD5Q9P267 1494 aa15.85■□□□□ 0.13
APOC1-203ENST00000588802 KANK4Q5T7N3 995 aaPredicted RBP15.84■□□□□ 0.13
APOC1-203ENST00000588802 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
APOC1-203ENST00000588802 KIF3BO15066 747 aa15.82■□□□□ 0.12
APOC1-203ENST00000588802 CAMSAP2Q08AD1 1489 aa15.82■□□□□ 0.12
APOC1-203ENST00000588802 PLXNC1O60486 1568 aa15.82■□□□□ 0.12
APOC1-203ENST00000588802 PTPRTO14522 1441 aa15.81■□□□□ 0.12
APOC1-203ENST00000588802 CLTCQ00610 1675 aaKnown RBP15.81■□□□□ 0.12
APOC1-203ENST00000588802 STRCQ7RTU9 1775 aa15.8■□□□□ 0.12
APOC1-203ENST00000588802 MROH2AA6NES4 1674 aa15.79■□□□□ 0.12
APOC1-203ENST00000588802 CCDC141Q6ZP82 1450 aa15.79■□□□□ 0.12
APOC1-203ENST00000588802 DHX29Q7Z478 1369 aaKnown RBP15.79■□□□□ 0.12
APOC1-203ENST00000588802 TSPY4P0CV99 314 aa15.79■□□□□ 0.12
APOC1-203ENST00000588802 TSPY10P0CW01 314 aa15.79■□□□□ 0.12
APOC1-203ENST00000588802 LRRC9Q6ZRR7 1453 aa15.78■□□□□ 0.12
APOC1-203ENST00000588802 NCKAP5LQ9HCH0 1330 aa15.78■□□□□ 0.12
APOC1-203ENST00000588802 APLP2Q06481 763 aa15.78■□□□□ 0.12
APOC1-203ENST00000588802 ADGBQ8N7X0 1667 aa15.77■□□□□ 0.12
APOC1-203ENST00000588802 PTPRKQ15262 1439 aa15.76■□□□□ 0.11
APOC1-203ENST00000588802 MAP3K1Q13233 1512 aa15.75■□□□□ 0.11
APOC1-203ENST00000588802 FBXO31Q5XUX0 539 aaPredicted RBP15.75■□□□□ 0.11
APOC1-203ENST00000588802 NCOA1Q15788 1441 aa15.75■□□□□ 0.11
APOC1-203ENST00000588802 CAMSAP1Q5T5Y3 1602 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms