RNA–Protein interactions for RNA: ENST00000588552.5

PTPRS-206, Transcript of protein tyrosine phosphatase, receptor type S, humanhuman

TSL 1 (best)

Gene PTPRS, Length 5,443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRS-206ENST00000588552 IGF1RP08069 1367 aa20.26■□□□□ 0.83
PTPRS-206ENST00000588552 ROCK2O75116 1388 aaKnown RBP20.26■□□□□ 0.83
PTPRS-206ENST00000588552 MORC1Q86VD1 984 aa20.24■□□□□ 0.83
PTPRS-206ENST00000588552 PNNQ9H307 717 aaKnown RBP20.24■□□□□ 0.83
PTPRS-206ENST00000588552 ARXQ96QS3 562 aa20.23■□□□□ 0.83
PTPRS-206ENST00000588552 ANP32BQ92688 251 aaKnown RBP20.23■□□□□ 0.83
PTPRS-206ENST00000588552 SOX12O15370 315 aa20.21■□□□□ 0.83
PTPRS-206ENST00000588552 WASHC2CQ9Y4E1 1318 aa20.2■□□□□ 0.82
PTPRS-206ENST00000588552 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
PTPRS-206ENST00000588552 FRAT1Q92837 279 aaPredicted RBP20.18■□□□□ 0.82
PTPRS-206ENST00000588552 HDGFL2Q7Z4V5 671 aaPredicted RBP20.18■□□□□ 0.82
PTPRS-206ENST00000588552 L3MBTL2Q969R5 705 aa20.17■□□□□ 0.82
PTPRS-206ENST00000588552 CCER2I3L3R5 266 aa20.16■□□□□ 0.82
PTPRS-206ENST00000588552 KTN1Q86UP2 1357 aaKnown RBP20.16■□□□□ 0.82
PTPRS-206ENST00000588552 CYB5RLQ6IPT4 315 aa20.14■□□□□ 0.81
PTPRS-206ENST00000588552 AQRO60306 1485 aaKnown RBP eCLIP20.13■□□□□ 0.816e-8■■■■■ 35.5
PTPRS-206ENST00000588552 EIF3AQ14152 1382 aaKnown RBP20.12■□□□□ 0.81
PTPRS-206ENST00000588552 NUTM2DQ5VT03 806 aaPredicted RBP20.09■□□□□ 0.81
PTPRS-206ENST00000588552 NBR1Q14596 966 aa20.09■□□□□ 0.81
PTPRS-206ENST00000588552 MS4A1P11836 297 aa20.09■□□□□ 0.81
PTPRS-206ENST00000588552 PPP4R2Q9NY27 417 aa20.08■□□□□ 0.8
PTPRS-206ENST00000588552 BECN1Q14457 450 aa20.07■□□□□ 0.8
PTPRS-206ENST00000588552 CHMP4BQ9H444 224 aaKnown RBP20.07■□□□□ 0.8
PTPRS-206ENST00000588552 EID1Q9Y6B2 187 aa20.06■□□□□ 0.8
PTPRS-206ENST00000588552 DDRGK1Q96HY6 314 aa20.06■□□□□ 0.8
PTPRS-206ENST00000588552 CFTRP13569 1480 aa20.05■□□□□ 0.8
PTPRS-206ENST00000588552 PAK3O75914 559 aaPredicted RBP20.05■□□□□ 0.8
PTPRS-206ENST00000588552 RALBP1Q15311 655 aa20.05■□□□□ 0.8
PTPRS-206ENST00000588552 CASC1Q6TDU7 716 aa20.04■□□□□ 0.8
PTPRS-206ENST00000588552 CCDC144AA2RUR9 1427 aa20.03■□□□□ 0.8
PTPRS-206ENST00000588552 DHX57Q6P158 1386 aaKnown RBP20.01■□□□□ 0.79
PTPRS-206ENST00000588552 RGS3P49796 1198 aa20.01■□□□□ 0.79
PTPRS-206ENST00000588552 RTF1Q92541 710 aaKnown RBP20.01■□□□□ 0.79
PTPRS-206ENST00000588552 NESP48681 1621 aa20■□□□□ 0.79
PTPRS-206ENST00000588552 GRIN2BQ13224 1484 aa20■□□□□ 0.79
PTPRS-206ENST00000588552 U2AF1L5P0DN76 240 aaPredicted RBP20■□□□□ 0.79
PTPRS-206ENST00000588552 U2AF1Q01081 240 aaKnown RBP eCLIP20■□□□□ 0.792e-6■■■■□ 20
PTPRS-206ENST00000588552 CC2D2AQ9P2K1 1620 aa19.99■□□□□ 0.79
PTPRS-206ENST00000588552 TERF2IPQ9NYB0 399 aa19.99■□□□□ 0.79
PTPRS-206ENST00000588552 EIF5BO60841 1220 aaKnown RBP19.97■□□□□ 0.79
PTPRS-206ENST00000588552 OS9Q13438 667 aaPredicted RBP19.96■□□□□ 0.79
PTPRS-206ENST00000588552 MYOM3Q5VTT5 1437 aa19.96■□□□□ 0.79
PTPRS-206ENST00000588552 TRAK1Q9UPV9 953 aa19.96■□□□□ 0.79
PTPRS-206ENST00000588552 NPHP1O15259 732 aa19.96■□□□□ 0.79
PTPRS-206ENST00000588552 KIF21BO75037 1637 aa19.95■□□□□ 0.78
PTPRS-206ENST00000588552 HMGXB3Q12766 1538 aa19.94■□□□□ 0.78
PTPRS-206ENST00000588552 MRC2Q9UBG0 1479 aa19.94■□□□□ 0.78
PTPRS-206ENST00000588552 B4GALNT3Q6L9W6 998 aa19.94■□□□□ 0.78
PTPRS-206ENST00000588552 UACAQ9BZF9 1416 aa19.93■□□□□ 0.78
PTPRS-206ENST00000588552 SYNJ1O43426 1573 aa19.93■□□□□ 0.78
PTPRS-206ENST00000588552 PRDM2Q13029 1718 aa19.92■□□□□ 0.78
PTPRS-206ENST00000588552 FGD6Q6ZV73 1430 aa19.92■□□□□ 0.78
PTPRS-206ENST00000588552 CUX1P39880 1505 aa19.91■□□□□ 0.78
PTPRS-206ENST00000588552 ZNF644Q9H582 1327 aaPredicted RBP19.91■□□□□ 0.78
PTPRS-206ENST00000588552 CSB-PGBD3P0DP91 1061 aa19.91■□□□□ 0.78
PTPRS-206ENST00000588552 ST20-MTHFSA0A0A6YYL1 179 aa19.91■□□□□ 0.78
PTPRS-206ENST00000588552 NGDNQ8NEJ9 315 aaKnown RBP19.9■□□□□ 0.78
PTPRS-206ENST00000588552 VGFO15240 615 aaPredicted RBP19.89■□□□□ 0.78
PTPRS-206ENST00000588552 CALD1Q05682 793 aaKnown RBP19.89■□□□□ 0.78
PTPRS-206ENST00000588552 FAM69CQ0P6D2 419 aa19.89■□□□□ 0.77
PTPRS-206ENST00000588552 NCLP19338 710 aaKnown RBP19.89■□□□□ 0.77
PTPRS-206ENST00000588552 CASKIN1Q8WXD9 1431 aa19.89■□□□□ 0.77
PTPRS-206ENST00000588552 LRRC9Q6ZRR7 1453 aa19.87■□□□□ 0.77
PTPRS-206ENST00000588552 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
PTPRS-206ENST00000588552 GOLGA6L22H0YM25 854 aa19.87■□□□□ 0.77
PTPRS-206ENST00000588552 IFT140Q96RY7 1462 aa19.86■□□□□ 0.77
PTPRS-206ENST00000588552 NUTM2FA1L443 756 aa19.86■□□□□ 0.77
PTPRS-206ENST00000588552 NLRP13Q86W25 1043 aa19.86■□□□□ 0.77
PTPRS-206ENST00000588552 PHLDB1Q86UU1 1377 aa19.86■□□□□ 0.77
PTPRS-206ENST00000588552 TOPBP1Q92547 1522 aa19.86■□□□□ 0.77
PTPRS-206ENST00000588552 IPO8O15397 1037 aaKnown RBP19.85■□□□□ 0.77
PTPRS-206ENST00000588552 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.84■□□□□ 0.77
PTPRS-206ENST00000588552 KIF15Q9NS87 1388 aa19.84■□□□□ 0.77
PTPRS-206ENST00000588552 RCAN3Q9UKA8 241 aa19.83■□□□□ 0.77
PTPRS-206ENST00000588552 PRG4Q92954 1404 aaPredicted RBP19.82■□□□□ 0.76
PTPRS-206ENST00000588552 NCOA2Q15596 1464 aa19.82■□□□□ 0.76
PTPRS-206ENST00000588552 PANK3Q9H999 370 aa19.81■□□□□ 0.76
PTPRS-206ENST00000588552 FYCO1Q9BQS8 1478 aa19.81■□□□□ 0.76
PTPRS-206ENST00000588552 TOP2BQ02880 1626 aa19.81■□□□□ 0.76
PTPRS-206ENST00000588552 POLA1P09884 1462 aaPredicted RBP19.81■□□□□ 0.76
PTPRS-206ENST00000588552 CCDC146Q8IYE0 955 aa19.79■□□□□ 0.76
PTPRS-206ENST00000588552 USP47Q96K76 1375 aa19.79■□□□□ 0.76
PTPRS-206ENST00000588552 AMPHP49418 695 aa19.78■□□□□ 0.76
PTPRS-206ENST00000588552 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
PTPRS-206ENST00000588552 SYNJ2O15056 1496 aa19.78■□□□□ 0.76
PTPRS-206ENST00000588552 EVC2Q86UK5 1308 aa19.77■□□□□ 0.76
PTPRS-206ENST00000588552 GOLGA2Q08379 1002 aa19.77■□□□□ 0.76
PTPRS-206ENST00000588552 KCNJ4P48050 445 aa19.77■□□□□ 0.76
PTPRS-206ENST00000588552 ANP32EQ9BTT0 268 aa19.77■□□□□ 0.76
PTPRS-206ENST00000588552 MYBBP1AQ9BQG0 1328 aaKnown RBP19.75■□□□□ 0.75
PTPRS-206ENST00000588552 ANKRD50Q9ULJ7 1429 aa19.75■□□□□ 0.75
PTPRS-206ENST00000588552 ITPRIPQ8IWB1 547 aa19.74■□□□□ 0.75
PTPRS-206ENST00000588552 ARHGAP5Q13017 1502 aa19.74■□□□□ 0.75
PTPRS-206ENST00000588552 MINK1Q8N4C8 1332 aaPredicted RBP19.73■□□□□ 0.75
PTPRS-206ENST00000588552 FGD1P98174 961 aa19.73■□□□□ 0.75
PTPRS-206ENST00000588552 PRXQ9BXM0 1461 aa19.73■□□□□ 0.75
PTPRS-206ENST00000588552 SNAPC4Q5SXM2 1469 aa19.73■□□□□ 0.75
PTPRS-206ENST00000588552 LTV1Q96GA3 475 aaPredicted RBP19.73■□□□□ 0.75
PTPRS-206ENST00000588552 STK31Q9BXU1 1019 aa19.72■□□□□ 0.75
PTPRS-206ENST00000588552 CHMP4AQ9BY43 222 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms