RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ZNF777Q9ULD5 760 aaPredicted RBP13.97□□□□□ -0.17
CIRBP-218ENST00000588344 SUPT6HQ7KZ85 1726 aaKnown RBP13.97□□□□□ -0.17
CIRBP-218ENST00000588344 MIA2Q96PC5 1412 aa13.97□□□□□ -0.17
CIRBP-218ENST00000588344 CFAP74Q9C0B2 1584 aa13.96□□□□□ -0.18
CIRBP-218ENST00000588344 PLEKHH2Q8IVE3 1493 aa13.95□□□□□ -0.18
CIRBP-218ENST00000588344 KIAA1107Q9UPP5 1409 aa13.95□□□□□ -0.18
CIRBP-218ENST00000588344 MYOM3Q5VTT5 1437 aa13.94□□□□□ -0.18
CIRBP-218ENST00000588344 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
CIRBP-218ENST00000588344 DENND4BO75064 1496 aaPredicted RBP13.93□□□□□ -0.18
CIRBP-218ENST00000588344 PPRC1Q5VV67 1664 aaKnown RBP13.93□□□□□ -0.18
CIRBP-218ENST00000588344 ADGRL1O94910 1474 aa13.93□□□□□ -0.18
CIRBP-218ENST00000588344 MYO5CQ9NQX4 1742 aa13.93□□□□□ -0.18
CIRBP-218ENST00000588344 RAPGEF3O95398 923 aa13.92□□□□□ -0.18
CIRBP-218ENST00000588344 TSPOAP1O95153 1857 aa13.92□□□□□ -0.18
CIRBP-218ENST00000588344 PREX2Q70Z35 1606 aa13.9□□□□□ -0.18
CIRBP-218ENST00000588344 HNRNPMP52272 730 aaKnown RBP eCLIP13.9□□□□□ -0.18
CIRBP-218ENST00000588344 PPARGC1BQ86YN6 1023 aaKnown RBP13.9□□□□□ -0.18
CIRBP-218ENST00000588344 COL17A1Q9UMD9 1497 aaPredicted RBP13.9□□□□□ -0.18
CIRBP-218ENST00000588344 ZNF644Q9H582 1327 aaPredicted RBP13.9□□□□□ -0.19
CIRBP-218ENST00000588344 TSPY4P0CV99 314 aa13.89□□□□□ -0.19
CIRBP-218ENST00000588344 TSPY10P0CW01 314 aa13.89□□□□□ -0.19
CIRBP-218ENST00000588344 AFAP1Q8N556 730 aa13.89□□□□□ -0.19
CIRBP-218ENST00000588344 KDM6BO15054 1643 aa13.89□□□□□ -0.19
CIRBP-218ENST00000588344 ZNF518AQ6AHZ1 1483 aa13.88□□□□□ -0.19
CIRBP-218ENST00000588344 FGD6Q6ZV73 1430 aa13.88□□□□□ -0.19
CIRBP-218ENST00000588344 ITSN2Q9NZM3 1697 aa13.88□□□□□ -0.19
CIRBP-218ENST00000588344 POGZQ7Z3K3 1410 aa13.87□□□□□ -0.19
CIRBP-218ENST00000588344 CDC42BPAQ5VT25 1732 aa13.87□□□□□ -0.19
CIRBP-218ENST00000588344 CDC42BPBQ9Y5S2 1711 aa13.87□□□□□ -0.19
CIRBP-218ENST00000588344 MAGI2Q86UL8 1455 aa13.87□□□□□ -0.19
CIRBP-218ENST00000588344 MYT1LQ9UL68 1186 aa13.86□□□□□ -0.19
CIRBP-218ENST00000588344 SPAG9O60271 1321 aaKnown RBP13.86□□□□□ -0.19
CIRBP-218ENST00000588344 ABCC1P33527 1531 aa13.85□□□□□ -0.19
CIRBP-218ENST00000588344 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.84□□□□□ -0.19
CIRBP-218ENST00000588344 FAM50AQ14320 339 aaKnown RBP13.84□□□□□ -0.19
CIRBP-218ENST00000588344 CAMSAP2Q08AD1 1489 aa13.84□□□□□ -0.19
CIRBP-218ENST00000588344 MBD5Q9P267 1494 aa13.84□□□□□ -0.19
CIRBP-218ENST00000588344 TRAPPC8Q9Y2L5 1435 aa13.83□□□□□ -0.2
CIRBP-218ENST00000588344 ARHGEF12Q9NZN5 1544 aa13.83□□□□□ -0.2
CIRBP-218ENST00000588344 SAMD9LQ8IVG5 1584 aa13.83□□□□□ -0.2
CIRBP-218ENST00000588344 TCOF1Q13428 1488 aaKnown RBP13.82□□□□□ -0.2
CIRBP-218ENST00000588344 MLH3Q9UHC1 1453 aa13.82□□□□□ -0.2
CIRBP-218ENST00000588344 RTEL1-TNFRSF6BF6WH68 1400 aa13.81□□□□□ -0.2
CIRBP-218ENST00000588344 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
CIRBP-218ENST00000588344 SYCP2Q9BX26 1530 aa13.8□□□□□ -0.2
CIRBP-218ENST00000588344 RRBP1Q9P2E9 1410 aaKnown RBP13.79□□□□□ -0.2
CIRBP-218ENST00000588344 ZMYM4Q5VZL5 1548 aa13.79□□□□□ -0.2
CIRBP-218ENST00000588344 KDM5CP41229 1560 aa13.78□□□□□ -0.2
CIRBP-218ENST00000588344 ARHGEF5Q12774 1597 aa13.78□□□□□ -0.2
CIRBP-218ENST00000588344 PTPN23Q9H3S7 1636 aa13.78□□□□□ -0.2
CIRBP-218ENST00000588344 ABCC5O15440 1437 aa13.76□□□□□ -0.21
CIRBP-218ENST00000588344 RICTORQ6R327 1708 aa13.76□□□□□ -0.21
CIRBP-218ENST00000588344 FRMPD1Q5SYB0 1578 aa13.75□□□□□ -0.21
CIRBP-218ENST00000588344 ATP10AO60312 1499 aa13.75□□□□□ -0.21
CIRBP-218ENST00000588344 DAPK1P53355 1430 aa13.75□□□□□ -0.21
CIRBP-218ENST00000588344 ZFYVE16Q7Z3T8 1539 aa13.74□□□□□ -0.21
CIRBP-218ENST00000588344 SHANK2Q9UPX8 1470 aa13.74□□□□□ -0.21
CIRBP-218ENST00000588344 C9orf84Q5VXU9 1444 aa13.73□□□□□ -0.21
CIRBP-218ENST00000588344 YEATS2Q9ULM3 1422 aa13.73□□□□□ -0.21
CIRBP-218ENST00000588344 ANKRD30AQ9BXX3 1397 aa13.73□□□□□ -0.21
CIRBP-218ENST00000588344 ARID4BQ4LE39 1312 aaPredicted RBP13.72□□□□□ -0.21
CIRBP-218ENST00000588344 HECW2Q9P2P5 1572 aa13.72□□□□□ -0.21
CIRBP-218ENST00000588344 DHX29Q7Z478 1369 aaKnown RBP13.71□□□□□ -0.21
CIRBP-218ENST00000588344 ATP7AQ04656 1500 aa13.71□□□□□ -0.21
CIRBP-218ENST00000588344 CHIC2Q9UKJ5 165 aa13.71□□□□□ -0.21
CIRBP-218ENST00000588344 ROCK1Q13464 1354 aa13.71□□□□□ -0.22
CIRBP-218ENST00000588344 ITGAEP38570 1179 aa13.7□□□□□ -0.22
CIRBP-218ENST00000588344 RRP7BPQ9NSQ0 103 aa13.7□□□□□ -0.22
CIRBP-218ENST00000588344 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
CIRBP-218ENST00000588344 NCOA1Q15788 1441 aa13.69□□□□□ -0.22
CIRBP-218ENST00000588344 MAST1Q9Y2H9 1570 aa13.69□□□□□ -0.22
CIRBP-218ENST00000588344 ARHGEF40Q8TER5 1519 aa13.69□□□□□ -0.22
CIRBP-218ENST00000588344 A2MP01023 1474 aa13.68□□□□□ -0.22
CIRBP-218ENST00000588344 DNMT1P26358 1616 aaKnown RBP13.68□□□□□ -0.22
CIRBP-218ENST00000588344 REREQ9P2R6 1566 aa13.67□□□□□ -0.22
CIRBP-218ENST00000588344 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
CIRBP-218ENST00000588344 INO80Q9ULG1 1556 aaPredicted RBP13.66□□□□□ -0.22
CIRBP-218ENST00000588344 ADGRL2O95490 1459 aa13.66□□□□□ -0.22
CIRBP-218ENST00000588344 KIDINS220Q9ULH0 1771 aa13.66□□□□□ -0.22
CIRBP-218ENST00000588344 AGLP35573 1532 aa13.65□□□□□ -0.22
CIRBP-218ENST00000588344 DIP2CQ9Y2E4 1556 aa13.65□□□□□ -0.22
CIRBP-218ENST00000588344 ACIN1Q9UKV3 1341 aaKnown RBP13.64□□□□□ -0.23
CIRBP-218ENST00000588344 PTPRKQ15262 1439 aa13.64□□□□□ -0.23
CIRBP-218ENST00000588344 KIF3BO15066 747 aa13.64□□□□□ -0.23
CIRBP-218ENST00000588344 ESF1Q9H501 851 aaKnown RBP13.64□□□□□ -0.23
CIRBP-218ENST00000588344 DUOX2Q9NRD8 1548 aa13.63□□□□□ -0.23
CIRBP-218ENST00000588344 ERBINQ96RT1 1412 aa13.63□□□□□ -0.23
CIRBP-218ENST00000588344 GGT6Q6P531 493 aa13.62□□□□□ -0.23
CIRBP-218ENST00000588344 PLXNC1O60486 1568 aa13.62□□□□□ -0.23
CIRBP-218ENST00000588344 ABCA6Q8N139 1617 aa13.61□□□□□ -0.23
CIRBP-218ENST00000588344 MLECQ14165 292 aa13.61□□□□□ -0.23
CIRBP-218ENST00000588344 TRIM26Q12899 539 aaPredicted RBP13.6□□□□□ -0.23
CIRBP-218ENST00000588344 ANKRD50Q9ULJ7 1429 aa13.6□□□□□ -0.23
CIRBP-218ENST00000588344 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
CIRBP-218ENST00000588344 CROCC2H7BZ55 1655 aa13.59□□□□□ -0.23
CIRBP-218ENST00000588344 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
CIRBP-218ENST00000588344 WASHC2CQ9Y4E1 1318 aa13.58□□□□□ -0.24
CIRBP-218ENST00000588344 HFM1A2PYH4 1435 aa13.57□□□□□ -0.24
CIRBP-218ENST00000588344 KANK1Q14678 1352 aa13.57□□□□□ -0.24
CIRBP-218ENST00000588344 CNTLNQ9NXG0 1405 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms