RNA–Protein interactions for RNA: ENST00000588090.5

CIRBP-216, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 3 BASIC

Gene CIRBP, Length 1,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-216ENST00000588090 COL17A1Q9UMD9 1497 aaPredicted RBP36.69■■■■□ 3.46
CIRBP-216ENST00000588090 AKNAQ7Z591 1439 aa36.69■■■■□ 3.46
CIRBP-216ENST00000588090 EFCAB2Q5VUJ9 269 aa36.69■■■■□ 3.46
CIRBP-216ENST00000588090 CCNB3Q8WWL7 1395 aa36.68■■■■□ 3.46
CIRBP-216ENST00000588090 KANK4Q5T7N3 995 aaPredicted RBP36.68■■■■□ 3.46
CIRBP-216ENST00000588090 NCOA2Q15596 1464 aa36.67■■■■□ 3.46
CIRBP-216ENST00000588090 GPATCH8Q9UKJ3 1502 aaKnown RBP36.67■■■■□ 3.46
CIRBP-216ENST00000588090 ITSN2Q9NZM3 1697 aa36.66■■■■□ 3.46
CIRBP-216ENST00000588090 ADGRL1O94910 1474 aa36.61■■■■□ 3.45
CIRBP-216ENST00000588090 DENND4BO75064 1496 aaPredicted RBP36.56■■■■□ 3.44
CIRBP-216ENST00000588090 CFDP1Q9UEE9 299 aaPredicted RBP36.54■■■■□ 3.44
CIRBP-216ENST00000588090 RICTORQ6R327 1708 aa36.53■■■■□ 3.44
CIRBP-216ENST00000588090 SCAPERQ9BY12 1400 aa36.52■■■■□ 3.44
CIRBP-216ENST00000588090 FRMPD1Q5SYB0 1578 aa36.51■■■■□ 3.43
CIRBP-216ENST00000588090 ABCC1P33527 1531 aa36.5■■■■□ 3.43
CIRBP-216ENST00000588090 SAMD9LQ8IVG5 1584 aa36.49■■■■□ 3.43
CIRBP-216ENST00000588090 RAPGEF3O95398 923 aa36.48■■■■□ 3.43
CIRBP-216ENST00000588090 POGZQ7Z3K3 1410 aa36.46■■■■□ 3.43
CIRBP-216ENST00000588090 ZNF777Q9ULD5 760 aaPredicted RBP36.45■■■■□ 3.43
CIRBP-216ENST00000588090 PLEKHH2Q8IVE3 1493 aa36.44■■■■□ 3.42
CIRBP-216ENST00000588090 MYOM3Q5VTT5 1437 aa36.42■■■■□ 3.42
CIRBP-216ENST00000588090 ZNF518AQ6AHZ1 1483 aa36.41■■■■□ 3.42
CIRBP-216ENST00000588090 ZMYM4Q5VZL5 1548 aa36.4■■■■□ 3.42
CIRBP-216ENST00000588090 KIAA1107Q9UPP5 1409 aa36.39■■■■□ 3.42
CIRBP-216ENST00000588090 SYCP2Q9BX26 1530 aa36.38■■■■□ 3.41
CIRBP-216ENST00000588090 ARHGEF12Q9NZN5 1544 aa36.38■■■■□ 3.41
CIRBP-216ENST00000588090 MIA2Q96PC5 1412 aa36.36■■■■□ 3.41
CIRBP-216ENST00000588090 KDM5CP41229 1560 aa36.35■■■■□ 3.41
CIRBP-216ENST00000588090 CAMSAP2Q08AD1 1489 aa36.33■■■■□ 3.41
CIRBP-216ENST00000588090 MAGI2Q86UL8 1455 aa36.31■■■■□ 3.4
CIRBP-216ENST00000588090 TRAPPC8Q9Y2L5 1435 aa36.3■■■■□ 3.4
CIRBP-216ENST00000588090 ZNF644Q9H582 1327 aaPredicted RBP36.3■■■■□ 3.4
CIRBP-216ENST00000588090 AFAP1Q8N556 730 aa36.28■■■■□ 3.4
CIRBP-216ENST00000588090 ARHGEF40Q8TER5 1519 aa36.27■■■■□ 3.4
CIRBP-216ENST00000588090 HNRNPMP52272 730 aaKnown RBP eCLIP36.26■■■■□ 3.4
CIRBP-216ENST00000588090 HECW2Q9P2P5 1572 aa36.25■■■■□ 3.39
CIRBP-216ENST00000588090 ZFYVE16Q7Z3T8 1539 aa36.25■■■■□ 3.39
CIRBP-216ENST00000588090 MBD5Q9P267 1494 aa36.24■■■■□ 3.39
CIRBP-216ENST00000588090 FGD6Q6ZV73 1430 aa36.23■■■■□ 3.39
CIRBP-216ENST00000588090 PTPN23Q9H3S7 1636 aa36.22■■■■□ 3.39
CIRBP-216ENST00000588090 MLH3Q9UHC1 1453 aa36.21■■■■□ 3.39
CIRBP-216ENST00000588090 ARHGEF5Q12774 1597 aa36.19■■■■□ 3.38
CIRBP-216ENST00000588090 PPARGC1BQ86YN6 1023 aaKnown RBP36.18■■■■□ 3.38
CIRBP-216ENST00000588090 RSPH4AQ5TD94 716 aa36.17■■■■□ 3.38
CIRBP-216ENST00000588090 YEATS2Q9ULM3 1422 aa36.17■■■■□ 3.38
CIRBP-216ENST00000588090 CCDC141Q6ZP82 1450 aa36.16■■■■□ 3.38
CIRBP-216ENST00000588090 KIDINS220Q9ULH0 1771 aa36.14■■■■□ 3.38
CIRBP-216ENST00000588090 TCOF1Q13428 1488 aaKnown RBP36.14■■■■□ 3.38
CIRBP-216ENST00000588090 MYT1LQ9UL68 1186 aa36.13■■■■□ 3.37
CIRBP-216ENST00000588090 SPAG9O60271 1321 aaKnown RBP36.12■■■■□ 3.37
CIRBP-216ENST00000588090 INO80Q9ULG1 1556 aaPredicted RBP36.11■■■■□ 3.37
CIRBP-216ENST00000588090 ATP7AQ04656 1500 aa36.1■■■■□ 3.37
CIRBP-216ENST00000588090 ABCA6Q8N139 1617 aa36.09■■■■□ 3.37
CIRBP-216ENST00000588090 DIP2CQ9Y2E4 1556 aa36.09■■■■□ 3.37
CIRBP-216ENST00000588090 ATP10AO60312 1499 aa36.07■■■■□ 3.37
CIRBP-216ENST00000588090 C9orf84Q5VXU9 1444 aa36.05■■■■□ 3.36
CIRBP-216ENST00000588090 RTEL1-TNFRSF6BF6WH68 1400 aa36.04■■■■□ 3.36
CIRBP-216ENST00000588090 REREQ9P2R6 1566 aa36.02■■■■□ 3.36
CIRBP-216ENST00000588090 TSPY4P0CV99 314 aa36.01■■■■□ 3.36
CIRBP-216ENST00000588090 TSPY10P0CW01 314 aa36.01■■■■□ 3.36
CIRBP-216ENST00000588090 DNMT1P26358 1616 aaKnown RBP36.01■■■■□ 3.35
CIRBP-216ENST00000588090 CROCC2H7BZ55 1655 aa36■■■■□ 3.35
CIRBP-216ENST00000588090 MAST1Q9Y2H9 1570 aa35.99■■■■□ 3.35
CIRBP-216ENST00000588090 FAM50AQ14320 339 aaKnown RBP35.96■■■■□ 3.35
CIRBP-216ENST00000588090 ADGBQ8N7X0 1667 aa35.96■■■■□ 3.35
CIRBP-216ENST00000588090 SIGLEC1Q9BZZ2 1709 aa35.96■■■■□ 3.35
CIRBP-216ENST00000588090 DAPK1P53355 1430 aa35.95■■■■□ 3.35
CIRBP-216ENST00000588090 SHANK2Q9UPX8 1470 aa35.95■■■■□ 3.35
CIRBP-216ENST00000588090 ABCC5O15440 1437 aa35.94■■■■□ 3.34
CIRBP-216ENST00000588090 ARID4BQ4LE39 1312 aaPredicted RBP35.93■■■■□ 3.34
CIRBP-216ENST00000588090 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.89■■■■□ 3.345e-6■■■□□ 18.7
CIRBP-216ENST00000588090 BCORL1Q5H9F3 1711 aa35.89■■■■□ 3.34
CIRBP-216ENST00000588090 RRBP1Q9P2E9 1410 aaKnown RBP35.88■■■■□ 3.33
CIRBP-216ENST00000588090 A2MP01023 1474 aa35.87■■■■□ 3.33
CIRBP-216ENST00000588090 PLXNC1O60486 1568 aa35.87■■■■□ 3.33
CIRBP-216ENST00000588090 AGLP35573 1532 aa35.87■■■■□ 3.33
CIRBP-216ENST00000588090 KDM4FA0A1W2PPD8 638 aa35.8■■■■□ 3.32
CIRBP-216ENST00000588090 ADAMTSL3P82987 1691 aa35.8■■■■□ 3.32
CIRBP-216ENST00000588090 DHX29Q7Z478 1369 aaKnown RBP35.77■■■■□ 3.32
CIRBP-216ENST00000588090 ADGRL2O95490 1459 aa35.73■■■■□ 3.31
CIRBP-216ENST00000588090 ANKRD30AQ9BXX3 1397 aa35.72■■■■□ 3.31
CIRBP-216ENST00000588090 MLECQ14165 292 aa35.71■■■■□ 3.31
CIRBP-216ENST00000588090 MADDQ8WXG6 1647 aa35.71■■■■□ 3.31
CIRBP-216ENST00000588090 DUOX2Q9NRD8 1548 aa35.71■■■■□ 3.31
CIRBP-216ENST00000588090 KIF15Q9NS87 1388 aa35.7■■■■□ 3.31
CIRBP-216ENST00000588090 CHIC2Q9UKJ5 165 aa35.7■■■■□ 3.31
CIRBP-216ENST00000588090 FER1L4A9Z1Z3 1794 aa35.69■■■■□ 3.3
CIRBP-216ENST00000588090 NCOA1Q15788 1441 aa35.69■■■■□ 3.3
CIRBP-216ENST00000588090 PTPRKQ15262 1439 aa35.67■■■■□ 3.3
CIRBP-216ENST00000588090 EIF2AK4Q9P2K8 1649 aaKnown RBP35.66■■■■□ 3.3
CIRBP-216ENST00000588090 RRP7BPQ9NSQ0 103 aa35.65■■■■□ 3.3
CIRBP-216ENST00000588090 ITGAEP38570 1179 aa35.62■■■■□ 3.29
CIRBP-216ENST00000588090 RIMS1Q86UR5 1692 aaKnown RBP35.62■■■■□ 3.29
CIRBP-216ENST00000588090 ERBINQ96RT1 1412 aa35.62■■■■□ 3.29
CIRBP-216ENST00000588090 ROCK1Q13464 1354 aa35.61■■■■□ 3.29
CIRBP-216ENST00000588090 KIF3BO15066 747 aa35.59■■■■□ 3.29
CIRBP-216ENST00000588090 RNF17Q9BXT8 1623 aaKnown RBP35.55■■■■□ 3.28
CIRBP-216ENST00000588090 GGT6Q6P531 493 aa35.54■■■■□ 3.28
CIRBP-216ENST00000588090 PTPRMP28827 1452 aa35.54■■■■□ 3.28
CIRBP-216ENST00000588090 AEBP2Q6ZN18 517 aaPredicted RBP35.54■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms