RNA–Protein interactions for RNA: ENST00000587834.5

SEC11C-204, Transcript of SEC11 homolog C, signal peptidase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC11C, Length 1,202 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11C-204ENST00000587834 PTPRMP28827 1452 aa39.19■■■■□ 3.86
SEC11C-204ENST00000587834 CASKIN1Q8WXD9 1431 aa39.19■■■■□ 3.86
SEC11C-204ENST00000587834 CLIP1P30622 1438 aa39.18■■■■□ 3.86
SEC11C-204ENST00000587834 ARID4BQ4LE39 1312 aaPredicted RBP39.17■■■■□ 3.86
SEC11C-204ENST00000587834 SCAPERQ9BY12 1400 aa39.17■■■■□ 3.86
SEC11C-204ENST00000587834 YEATS2Q9ULM3 1422 aa39.16■■■■□ 3.86
SEC11C-204ENST00000587834 CCDC18Q5T9S5 1454 aa39.15■■■■□ 3.86
SEC11C-204ENST00000587834 MAGI2Q86UL8 1455 aa39.12■■■■□ 3.85
SEC11C-204ENST00000587834 ARHGAP5Q13017 1502 aa39.12■■■■□ 3.85
SEC11C-204ENST00000587834 RIMS1Q86UR5 1692 aaKnown RBP39.11■■■■□ 3.85
SEC11C-204ENST00000587834 CDC42BPBQ9Y5S2 1711 aa39.1■■■■□ 3.85
SEC11C-204ENST00000587834 FYCO1Q9BQS8 1478 aa39.09■■■■□ 3.85
SEC11C-204ENST00000587834 EFCAB2Q5VUJ9 269 aa39.07■■■■□ 3.85
SEC11C-204ENST00000587834 PREX2Q70Z35 1606 aa39.06■■■■□ 3.84
SEC11C-204ENST00000587834 ZNF518AQ6AHZ1 1483 aa38.98■■■■□ 3.83
SEC11C-204ENST00000587834 KDM5CP41229 1560 aa38.98■■■■□ 3.83
SEC11C-204ENST00000587834 CDC42BPAQ5VT25 1732 aa38.97■■■■□ 3.83
SEC11C-204ENST00000587834 FER1L4A9Z1Z3 1794 aa38.95■■■■□ 3.83
SEC11C-204ENST00000587834 ABCC1P33527 1531 aa38.92■■■■□ 3.82
SEC11C-204ENST00000587834 ATP10AO60312 1499 aa38.92■■■■□ 3.82
SEC11C-204ENST00000587834 ITSN2Q9NZM3 1697 aa38.91■■■■□ 3.82
SEC11C-204ENST00000587834 C9orf84Q5VXU9 1444 aa38.91■■■■□ 3.82
SEC11C-204ENST00000587834 DIP2CQ9Y2E4 1556 aa38.85■■■■□ 3.81
SEC11C-204ENST00000587834 AFAP1Q8N556 730 aa38.84■■■■□ 3.81
SEC11C-204ENST00000587834 ARHGEF12Q9NZN5 1544 aa38.84■■■■□ 3.81
SEC11C-204ENST00000587834 ABCA6Q8N139 1617 aa38.83■■■■□ 3.81
SEC11C-204ENST00000587834 MLECQ14165 292 aa38.83■■■■□ 3.81
SEC11C-204ENST00000587834 LMTK3Q96Q04 1460 aa38.83■■■■□ 3.81
SEC11C-204ENST00000587834 TRAPPC8Q9Y2L5 1435 aa38.79■■■■□ 3.8
SEC11C-204ENST00000587834 SAMD9LQ8IVG5 1584 aa38.75■■■■□ 3.79
SEC11C-204ENST00000587834 PLPPR3Q6T4P5 718 aa38.75■■■■□ 3.79
SEC11C-204ENST00000587834 REREQ9P2R6 1566 aa38.74■■■■□ 3.79
SEC11C-204ENST00000587834 MLH3Q9UHC1 1453 aa38.74■■■■□ 3.79
SEC11C-204ENST00000587834 ILDR1Q86SU0 546 aaPredicted RBP38.71■■■■□ 3.79
SEC11C-204ENST00000587834 MYT1LQ9UL68 1186 aa38.71■■■■□ 3.79
SEC11C-204ENST00000587834 GPATCH8Q9UKJ3 1502 aaKnown RBP38.71■■■■□ 3.79
SEC11C-204ENST00000587834 KIDINS220Q9ULH0 1771 aa38.71■■■■□ 3.79
SEC11C-204ENST00000587834 CEP162Q5TB80 1403 aa38.71■■■■□ 3.79
SEC11C-204ENST00000587834 SYCP2Q9BX26 1530 aa38.68■■■■□ 3.78
SEC11C-204ENST00000587834 MTUS2Q5JR59 1369 aa38.62■■■■□ 3.77
SEC11C-204ENST00000587834 ZNF777Q9ULD5 760 aaPredicted RBP38.61■■■■□ 3.77
SEC11C-204ENST00000587834 EHBP1L1Q8N3D4 1523 aa38.6■■■■□ 3.77
SEC11C-204ENST00000587834 AGLP35573 1532 aa38.58■■■■□ 3.77
SEC11C-204ENST00000587834 PREX1Q8TCU6 1659 aa38.57■■■■□ 3.76
SEC11C-204ENST00000587834 TIAM1Q13009 1591 aa38.57■■■■□ 3.76
SEC11C-204ENST00000587834 CCNB3Q8WWL7 1395 aa38.57■■■■□ 3.76
SEC11C-204ENST00000587834 HSPA2P54652 639 aa38.54■■■■□ 3.76
SEC11C-204ENST00000587834 INO80Q9ULG1 1556 aaPredicted RBP38.51■■■■□ 3.76
SEC11C-204ENST00000587834 PLEKHH2Q8IVE3 1493 aa38.5■■■■□ 3.75
SEC11C-204ENST00000587834 C3P01024 1663 aa38.49■■■■□ 3.75
SEC11C-204ENST00000587834 CFDP1Q9UEE9 299 aaPredicted RBP38.49■■■■□ 3.75
SEC11C-204ENST00000587834 ATP7AQ04656 1500 aa38.48■■■■□ 3.75
SEC11C-204ENST00000587834 KIAA1107Q9UPP5 1409 aa38.48■■■■□ 3.75
SEC11C-204ENST00000587834 CEBPAP49715 358 aaPredicted RBP38.48■■■■□ 3.75
SEC11C-204ENST00000587834 HNRNPMP52272 730 aaKnown RBP eCLIP38.48■■■■□ 3.75
SEC11C-204ENST00000587834 SUPT6HQ7KZ85 1726 aaKnown RBP38.44■■■■□ 3.74
SEC11C-204ENST00000587834 SPAG9O60271 1321 aaKnown RBP38.43■■■■□ 3.74
SEC11C-204ENST00000587834 PLXNC1O60486 1568 aa38.38■■■■□ 3.73
SEC11C-204ENST00000587834 ZNF644Q9H582 1327 aaPredicted RBP38.34■■■■□ 3.73
SEC11C-204ENST00000587834 SETD1BQ9UPS6 1966 aaKnown RBP38.33■■■■□ 3.73
SEC11C-204ENST00000587834 LOC105371045A0A1W2PR82 267 aa38.32■■■■□ 3.72
SEC11C-204ENST00000587834 NCOA2Q15596 1464 aa38.32■■■■□ 3.72
SEC11C-204ENST00000587834 ADGBQ8N7X0 1667 aa38.32■■■■□ 3.72
SEC11C-204ENST00000587834 MROH2AA6NES4 1674 aa38.31■■■■□ 3.72
SEC11C-204ENST00000587834 UHRF1BP1Q6BDS2 1440 aa38.3■■■■□ 3.72
SEC11C-204ENST00000587834 MBD5Q9P267 1494 aa38.3■■■■□ 3.72
SEC11C-204ENST00000587834 ESF1Q9H501 851 aaKnown RBP38.3■■■■□ 3.72
SEC11C-204ENST00000587834 A2MP01023 1474 aa38.29■■■■□ 3.72
SEC11C-204ENST00000587834 VPS8Q8N3P4 1428 aa38.29■■■■□ 3.72
SEC11C-204ENST00000587834 CNTLNQ9NXG0 1405 aa38.29■■■■□ 3.72
SEC11C-204ENST00000587834 STRCQ7RTU9 1775 aa38.26■■■■□ 3.71
SEC11C-204ENST00000587834 CLTCQ00610 1675 aaKnown RBP38.24■■■■□ 3.71
SEC11C-204ENST00000587834 CAMSAP2Q08AD1 1489 aa38.22■■■■□ 3.71
SEC11C-204ENST00000587834 FBXO41Q8TF61 875 aa38.2■■■■□ 3.71
SEC11C-204ENST00000587834 LRRC9Q6ZRR7 1453 aa38.16■■■■□ 3.7
SEC11C-204ENST00000587834 CCDC141Q6ZP82 1450 aa38.15■■■■□ 3.7
SEC11C-204ENST00000587834 RTEL1-TNFRSF6BF6WH68 1400 aa38.13■■■■□ 3.7
SEC11C-204ENST00000587834 NPATQ14207 1427 aa38.1■■■■□ 3.69
SEC11C-204ENST00000587834 ZMYM3Q14202 1370 aa38.09■■■■□ 3.69
SEC11C-204ENST00000587834 ARHGEF5Q12774 1597 aa38.07■■■■□ 3.69
SEC11C-204ENST00000587834 GGT6Q6P531 493 aa38.05■■■■□ 3.68
SEC11C-204ENST00000587834 MAP3K1Q13233 1512 aa38.05■■■■□ 3.68
SEC11C-204ENST00000587834 MYO3AQ8NEV4 1616 aa38.05■■■■□ 3.68
SEC11C-204ENST00000587834 DHX29Q7Z478 1369 aaKnown RBP38.01■■■■□ 3.68
SEC11C-204ENST00000587834 ZNF142P52746 1687 aaPredicted RBP38.01■■■■□ 3.67
SEC11C-204ENST00000587834 KANK4Q5T7N3 995 aaPredicted RBP37.98■■■■□ 3.67
SEC11C-204ENST00000587834 PTPRKQ15262 1439 aa37.97■■■■□ 3.67
SEC11C-204ENST00000587834 NCOA1Q15788 1441 aa37.95■■■■□ 3.67
SEC11C-204ENST00000587834 CAMSAP1Q5T5Y3 1602 aa37.95■■■■□ 3.67
SEC11C-204ENST00000587834 DMRT2Q9Y5R5 561 aa37.95■■■■□ 3.67
SEC11C-204ENST00000587834 CERKQ8TCT0 537 aa37.94■■■■□ 3.66
SEC11C-204ENST00000587834 RSPH4AQ5TD94 716 aa37.93■■■■□ 3.66
SEC11C-204ENST00000587834 CEP170BQ9Y4F5 1589 aaPredicted RBP37.92■■■■□ 3.66
SEC11C-204ENST00000587834 PTPRTO14522 1441 aa37.91■■■■□ 3.66
SEC11C-204ENST00000587834 MAST1Q9Y2H9 1570 aa37.9■■■■□ 3.66
SEC11C-204ENST00000587834 PPP6R1Q9UPN7 881 aa37.9■■■■□ 3.66
SEC11C-204ENST00000587834 MYOM3Q5VTT5 1437 aa37.89■■■■□ 3.66
SEC11C-204ENST00000587834 KDM5DQ9BY66 1539 aa37.88■■■■□ 3.65
SEC11C-204ENST00000587834 KIF3BO15066 747 aa37.86■■■■□ 3.65
SEC11C-204ENST00000587834 FAM135AQ9P2D6 1515 aa37.86■■■■□ 3.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms