RNA–Protein interactions for RNA: ENST00000587368.1

CHAF1A-204, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-204ENST00000587368 EHBP1L1Q8N3D4 1523 aa21.58■■□□□ 1.04
CHAF1A-204ENST00000587368 GPATCH8Q9UKJ3 1502 aaKnown RBP21.57■■□□□ 1.04
CHAF1A-204ENST00000587368 KDM4FA0A1W2PPD8 638 aa21.57■■□□□ 1.04
CHAF1A-204ENST00000587368 FRMPD1Q5SYB0 1578 aa21.57■■□□□ 1.04
CHAF1A-204ENST00000587368 APLP2Q06481 763 aa21.56■■□□□ 1.04
CHAF1A-204ENST00000587368 CFDP1Q9UEE9 299 aaPredicted RBP21.56■■□□□ 1.04
CHAF1A-204ENST00000587368 ZNF777Q9ULD5 760 aaPredicted RBP21.56■■□□□ 1.04
CHAF1A-204ENST00000587368 POGZQ7Z3K3 1410 aa21.55■■□□□ 1.04
CHAF1A-204ENST00000587368 PREX2Q70Z35 1606 aa21.55■■□□□ 1.04
CHAF1A-204ENST00000587368 TIAM1Q13009 1591 aa21.55■■□□□ 1.04
CHAF1A-204ENST00000587368 RICTORQ6R327 1708 aa21.54■■□□□ 1.04
CHAF1A-204ENST00000587368 CDC42BPBQ9Y5S2 1711 aa21.54■■□□□ 1.04
CHAF1A-204ENST00000587368 MAGI2Q86UL8 1455 aa21.52■■□□□ 1.04
CHAF1A-204ENST00000587368 MAP3K1Q13233 1512 aa21.52■■□□□ 1.04
CHAF1A-204ENST00000587368 AFAP1Q8N556 730 aa21.52■■□□□ 1.04
CHAF1A-204ENST00000587368 CDC42BPAQ5VT25 1732 aa21.51■■□□□ 1.03
CHAF1A-204ENST00000587368 ZNF518AQ6AHZ1 1483 aa21.51■■□□□ 1.03
CHAF1A-204ENST00000587368 ZMYM4Q5VZL5 1548 aa21.5■■□□□ 1.03
CHAF1A-204ENST00000587368 LRRC9Q6ZRR7 1453 aa21.5■■□□□ 1.03
CHAF1A-204ENST00000587368 NCOA2Q15596 1464 aa21.48■■□□□ 1.03
CHAF1A-204ENST00000587368 KANK4Q5T7N3 995 aaPredicted RBP21.48■■□□□ 1.03
CHAF1A-204ENST00000587368 MYT1LQ9UL68 1186 aa21.48■■□□□ 1.03
CHAF1A-204ENST00000587368 ARID4BQ4LE39 1312 aaPredicted RBP21.48■■□□□ 1.03
CHAF1A-204ENST00000587368 ABCC1P33527 1531 aa21.46■■□□□ 1.03
CHAF1A-204ENST00000587368 ZFYVE16Q7Z3T8 1539 aa21.46■■□□□ 1.03
CHAF1A-204ENST00000587368 YEATS2Q9ULM3 1422 aa21.46■■□□□ 1.03
CHAF1A-204ENST00000587368 PLEKHH2Q8IVE3 1493 aa21.45■■□□□ 1.03
CHAF1A-204ENST00000587368 ARHGEF40Q8TER5 1519 aa21.45■■□□□ 1.02
CHAF1A-204ENST00000587368 ARHGEF12Q9NZN5 1544 aa21.45■■□□□ 1.02
CHAF1A-204ENST00000587368 HNRNPMP52272 730 aaKnown RBP eCLIP21.45■■□□□ 1.02
CHAF1A-204ENST00000587368 SUPT6HQ7KZ85 1726 aaKnown RBP21.45■■□□□ 1.02
CHAF1A-204ENST00000587368 KIAA1107Q9UPP5 1409 aa21.45■■□□□ 1.02
CHAF1A-204ENST00000587368 TRAPPC8Q9Y2L5 1435 aa21.45■■□□□ 1.02
CHAF1A-204ENST00000587368 KDM5CP41229 1560 aa21.42■■□□□ 1.02
CHAF1A-204ENST00000587368 SAMD9LQ8IVG5 1584 aa21.42■■□□□ 1.02
CHAF1A-204ENST00000587368 ATP10AO60312 1499 aa21.4■■□□□ 1.02
CHAF1A-204ENST00000587368 MLH3Q9UHC1 1453 aa21.4■■□□□ 1.02
CHAF1A-204ENST00000587368 ZNF644Q9H582 1327 aaPredicted RBP21.4■■□□□ 1.02
CHAF1A-204ENST00000587368 ITSN2Q9NZM3 1697 aa21.4■■□□□ 1.02
CHAF1A-204ENST00000587368 SYCP2Q9BX26 1530 aa21.39■■□□□ 1.01
CHAF1A-204ENST00000587368 SPAG9O60271 1321 aaKnown RBP21.38■■□□□ 1.01
CHAF1A-204ENST00000587368 C9orf84Q5VXU9 1444 aa21.36■■□□□ 1.01
CHAF1A-204ENST00000587368 HECW2Q9P2P5 1572 aa21.36■■□□□ 1.01
CHAF1A-204ENST00000587368 RSPH4AQ5TD94 716 aa21.34■■□□□ 1.01
CHAF1A-204ENST00000587368 MBD5Q9P267 1494 aa21.32■■□□□ 1
CHAF1A-204ENST00000587368 MLECQ14165 292 aa21.31■■□□□ 1
CHAF1A-204ENST00000587368 MYOM3Q5VTT5 1437 aa21.3■■□□□ 1
CHAF1A-204ENST00000587368 MIA2Q96PC5 1412 aa21.29■■□□□ 1
CHAF1A-204ENST00000587368 CAMSAP2Q08AD1 1489 aa21.29■■□□□ 1
CHAF1A-204ENST00000587368 BCORL1Q5H9F3 1711 aa21.29■■□□□ 1
CHAF1A-204ENST00000587368 DIP2CQ9Y2E4 1556 aa21.28■■□□□ 1
CHAF1A-204ENST00000587368 ADAMTSL3P82987 1691 aa21.28■■□□□ 1
CHAF1A-204ENST00000587368 KIDINS220Q9ULH0 1771 aa21.26■□□□□ 0.99
CHAF1A-204ENST00000587368 TSPY4P0CV99 314 aa21.26■□□□□ 0.99
CHAF1A-204ENST00000587368 TSPY10P0CW01 314 aa21.26■□□□□ 0.99
CHAF1A-204ENST00000587368 ABCA6Q8N139 1617 aa21.26■□□□□ 0.99
CHAF1A-204ENST00000587368 REREQ9P2R6 1566 aa21.25■□□□□ 0.99
CHAF1A-204ENST00000587368 CCDC141Q6ZP82 1450 aa21.25■□□□□ 0.99
CHAF1A-204ENST00000587368 ATP7AQ04656 1500 aa21.24■□□□□ 0.99
CHAF1A-204ENST00000587368 RTEL1-TNFRSF6BF6WH68 1400 aa21.24■□□□□ 0.99
CHAF1A-204ENST00000587368 SIGLEC1Q9BZZ2 1709 aa21.23■□□□□ 0.99
CHAF1A-204ENST00000587368 PTPRMP28827 1452 aa21.22■□□□□ 0.99
CHAF1A-204ENST00000587368 AGLP35573 1532 aa21.21■□□□□ 0.99
CHAF1A-204ENST00000587368 MADDQ8WXG6 1647 aa21.21■□□□□ 0.99
CHAF1A-204ENST00000587368 INO80Q9ULG1 1556 aaPredicted RBP21.2■□□□□ 0.98
CHAF1A-204ENST00000587368 ARHGEF5Q12774 1597 aa21.19■□□□□ 0.98
CHAF1A-204ENST00000587368 A2MP01023 1474 aa21.19■□□□□ 0.98
CHAF1A-204ENST00000587368 FGD6Q6ZV73 1430 aa21.18■□□□□ 0.98
CHAF1A-204ENST00000587368 ESF1Q9H501 851 aaKnown RBP21.17■□□□□ 0.98
CHAF1A-204ENST00000587368 DHX29Q7Z478 1369 aaKnown RBP21.14■□□□□ 0.98
CHAF1A-204ENST00000587368 PLPPR3Q6T4P5 718 aa21.14■□□□□ 0.97
CHAF1A-204ENST00000587368 RIMS1Q86UR5 1692 aaKnown RBP21.13■□□□□ 0.97
CHAF1A-204ENST00000587368 PTPN23Q9H3S7 1636 aa21.12■□□□□ 0.97
CHAF1A-204ENST00000587368 TCOF1Q13428 1488 aaKnown RBP21.11■□□□□ 0.97
CHAF1A-204ENST00000587368 PLXNC1O60486 1568 aa21.1■□□□□ 0.97
CHAF1A-204ENST00000587368 ADGBQ8N7X0 1667 aa21.1■□□□□ 0.97
CHAF1A-204ENST00000587368 GGT6Q6P531 493 aa21.1■□□□□ 0.97
CHAF1A-204ENST00000587368 FER1L4A9Z1Z3 1794 aa21.1■□□□□ 0.97
CHAF1A-204ENST00000587368 FAM50AQ14320 339 aaKnown RBP21.09■□□□□ 0.97
CHAF1A-204ENST00000587368 PPARGC1BQ86YN6 1023 aaKnown RBP21.09■□□□□ 0.97
CHAF1A-204ENST00000587368 PPP6R1Q9UPN7 881 aa21.09■□□□□ 0.97
CHAF1A-204ENST00000587368 KIF3BO15066 747 aa21.08■□□□□ 0.97
CHAF1A-204ENST00000587368 ABCC5O15440 1437 aa21.08■□□□□ 0.97
CHAF1A-204ENST00000587368 MAST1Q9Y2H9 1570 aa21.07■□□□□ 0.96
CHAF1A-204ENST00000587368 CNTLNQ9NXG0 1405 aa21.07■□□□□ 0.96
CHAF1A-204ENST00000587368 CEBPAP49715 358 aaPredicted RBP21.07■□□□□ 0.96
CHAF1A-204ENST00000587368 DAPK1P53355 1430 aa21.05■□□□□ 0.96
CHAF1A-204ENST00000587368 SHANK2Q9UPX8 1470 aa21.04■□□□□ 0.96
CHAF1A-204ENST00000587368 RRP7BPQ9NSQ0 103 aa21.01■□□□□ 0.95
CHAF1A-204ENST00000587368 CHIC2Q9UKJ5 165 aa21.01■□□□□ 0.95
CHAF1A-204ENST00000587368 DNMT1P26358 1616 aaKnown RBP21■□□□□ 0.95
CHAF1A-204ENST00000587368 ZMYM3Q14202 1370 aa20.99■□□□□ 0.95
CHAF1A-204ENST00000587368 KIF15Q9NS87 1388 aa20.99■□□□□ 0.95
CHAF1A-204ENST00000587368 ANKRD30AQ9BXX3 1397 aa20.98■□□□□ 0.95
CHAF1A-204ENST00000587368 DUOX2Q9NRD8 1548 aa20.97■□□□□ 0.95
CHAF1A-204ENST00000587368 WASHC2CQ9Y4E1 1318 aa20.96■□□□□ 0.95
CHAF1A-204ENST00000587368 CROCC2H7BZ55 1655 aa20.94■□□□□ 0.94
CHAF1A-204ENST00000587368 NCOA1Q15788 1441 aa20.94■□□□□ 0.94
CHAF1A-204ENST00000587368 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.93■□□□□ 0.94
CHAF1A-204ENST00000587368 LMTK3Q96Q04 1460 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 120.1 ms