RNA–Protein interactions for RNA: ENST00000586985.1

SMARCA4-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5

Gene SMARCA4, Length 534 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-212ENST00000586985 CFDP1Q9UEE9 299 aaPredicted RBP22.77■■□□□ 1.24
SMARCA4-212ENST00000586985 MYO5CQ9NQX4 1742 aa22.76■■□□□ 1.23
SMARCA4-212ENST00000586985 EHBP1L1Q8N3D4 1523 aa22.75■■□□□ 1.23
SMARCA4-212ENST00000586985 KANK4Q5T7N3 995 aaPredicted RBP22.74■■□□□ 1.23
SMARCA4-212ENST00000586985 GPATCH8Q9UKJ3 1502 aaKnown RBP22.73■■□□□ 1.23
SMARCA4-212ENST00000586985 TIAM1Q13009 1591 aa22.73■■□□□ 1.23
SMARCA4-212ENST00000586985 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
SMARCA4-212ENST00000586985 MAP3K1Q13233 1512 aa22.72■■□□□ 1.23
SMARCA4-212ENST00000586985 MYT1LQ9UL68 1186 aa22.71■■□□□ 1.23
SMARCA4-212ENST00000586985 AFAP1Q8N556 730 aa22.7■■□□□ 1.22
SMARCA4-212ENST00000586985 LRRC9Q6ZRR7 1453 aa22.7■■□□□ 1.22
SMARCA4-212ENST00000586985 NCOA2Q15596 1464 aa22.66■■□□□ 1.22
SMARCA4-212ENST00000586985 POGZQ7Z3K3 1410 aa22.66■■□□□ 1.22
SMARCA4-212ENST00000586985 HNRNPMP52272 730 aaKnown RBP eCLIP22.66■■□□□ 1.22
SMARCA4-212ENST00000586985 PREX2Q70Z35 1606 aa22.66■■□□□ 1.22
SMARCA4-212ENST00000586985 CDC42BPBQ9Y5S2 1711 aa22.65■■□□□ 1.22
SMARCA4-212ENST00000586985 KDM4FA0A1W2PPD8 638 aa22.64■■□□□ 1.21
SMARCA4-212ENST00000586985 ARID4BQ4LE39 1312 aaPredicted RBP22.63■■□□□ 1.21
SMARCA4-212ENST00000586985 MAGI2Q86UL8 1455 aa22.63■■□□□ 1.21
SMARCA4-212ENST00000586985 FRMPD1Q5SYB0 1578 aa22.63■■□□□ 1.21
SMARCA4-212ENST00000586985 ZNF518AQ6AHZ1 1483 aa22.62■■□□□ 1.21
SMARCA4-212ENST00000586985 CDC42BPAQ5VT25 1732 aa22.62■■□□□ 1.21
SMARCA4-212ENST00000586985 SUPT6HQ7KZ85 1726 aaKnown RBP22.61■■□□□ 1.21
SMARCA4-212ENST00000586985 ZNF644Q9H582 1327 aaPredicted RBP22.6■■□□□ 1.21
SMARCA4-212ENST00000586985 PLEKHH2Q8IVE3 1493 aa22.6■■□□□ 1.21
SMARCA4-212ENST00000586985 RICTORQ6R327 1708 aa22.6■■□□□ 1.21
SMARCA4-212ENST00000586985 KIAA1107Q9UPP5 1409 aa22.59■■□□□ 1.21
SMARCA4-212ENST00000586985 TRAPPC8Q9Y2L5 1435 aa22.59■■□□□ 1.21
SMARCA4-212ENST00000586985 ARHGEF12Q9NZN5 1544 aa22.59■■□□□ 1.21
SMARCA4-212ENST00000586985 ABCC1P33527 1531 aa22.57■■□□□ 1.2
SMARCA4-212ENST00000586985 ZMYM4Q5VZL5 1548 aa22.57■■□□□ 1.2
SMARCA4-212ENST00000586985 YEATS2Q9ULM3 1422 aa22.57■■□□□ 1.2
SMARCA4-212ENST00000586985 ZFYVE16Q7Z3T8 1539 aa22.56■■□□□ 1.2
SMARCA4-212ENST00000586985 RSPH4AQ5TD94 716 aa22.55■■□□□ 1.2
SMARCA4-212ENST00000586985 SPAG9O60271 1321 aaKnown RBP22.55■■□□□ 1.2
SMARCA4-212ENST00000586985 SAMD9LQ8IVG5 1584 aa22.55■■□□□ 1.2
SMARCA4-212ENST00000586985 ATP10AO60312 1499 aa22.53■■□□□ 1.2
SMARCA4-212ENST00000586985 ITSN2Q9NZM3 1697 aa22.52■■□□□ 1.2
SMARCA4-212ENST00000586985 MLH3Q9UHC1 1453 aa22.52■■□□□ 1.2
SMARCA4-212ENST00000586985 SYCP2Q9BX26 1530 aa22.51■■□□□ 1.19
SMARCA4-212ENST00000586985 ARHGEF40Q8TER5 1519 aa22.5■■□□□ 1.19
SMARCA4-212ENST00000586985 KDM5CP41229 1560 aa22.49■■□□□ 1.19
SMARCA4-212ENST00000586985 MYOM3Q5VTT5 1437 aa22.48■■□□□ 1.19
SMARCA4-212ENST00000586985 TSPY4P0CV99 314 aa22.48■■□□□ 1.19
SMARCA4-212ENST00000586985 TSPY10P0CW01 314 aa22.48■■□□□ 1.19
SMARCA4-212ENST00000586985 MIA2Q96PC5 1412 aa22.48■■□□□ 1.19
SMARCA4-212ENST00000586985 MLECQ14165 292 aa22.47■■□□□ 1.19
SMARCA4-212ENST00000586985 C9orf84Q5VXU9 1444 aa22.46■■□□□ 1.19
SMARCA4-212ENST00000586985 MBD5Q9P267 1494 aa22.46■■□□□ 1.19
SMARCA4-212ENST00000586985 CAMSAP2Q08AD1 1489 aa22.44■■□□□ 1.18
SMARCA4-212ENST00000586985 HECW2Q9P2P5 1572 aa22.44■■□□□ 1.18
SMARCA4-212ENST00000586985 PPARGC1BQ86YN6 1023 aaKnown RBP22.42■■□□□ 1.18
SMARCA4-212ENST00000586985 CCDC141Q6ZP82 1450 aa22.39■■□□□ 1.17
SMARCA4-212ENST00000586985 RTEL1-TNFRSF6BF6WH68 1400 aa22.38■■□□□ 1.17
SMARCA4-212ENST00000586985 DIP2CQ9Y2E4 1556 aa22.37■■□□□ 1.17
SMARCA4-212ENST00000586985 ATP7AQ04656 1500 aa22.36■■□□□ 1.17
SMARCA4-212ENST00000586985 FGD6Q6ZV73 1430 aa22.35■■□□□ 1.17
SMARCA4-212ENST00000586985 ESF1Q9H501 851 aaKnown RBP22.35■■□□□ 1.17
SMARCA4-212ENST00000586985 KIDINS220Q9ULH0 1771 aa22.35■■□□□ 1.17
SMARCA4-212ENST00000586985 FAM50AQ14320 339 aaKnown RBP22.34■■□□□ 1.17
SMARCA4-212ENST00000586985 ABCA6Q8N139 1617 aa22.33■■□□□ 1.17
SMARCA4-212ENST00000586985 BCORL1Q5H9F3 1711 aa22.32■■□□□ 1.16
SMARCA4-212ENST00000586985 ARHGEF5Q12774 1597 aa22.32■■□□□ 1.16
SMARCA4-212ENST00000586985 REREQ9P2R6 1566 aa22.31■■□□□ 1.16
SMARCA4-212ENST00000586985 A2MP01023 1474 aa22.31■■□□□ 1.16
SMARCA4-212ENST00000586985 ADAMTSL3P82987 1691 aa22.3■■□□□ 1.16
SMARCA4-212ENST00000586985 PLPPR3Q6T4P5 718 aa22.3■■□□□ 1.16
SMARCA4-212ENST00000586985 DHX29Q7Z478 1369 aaKnown RBP22.29■■□□□ 1.16
SMARCA4-212ENST00000586985 AGLP35573 1532 aa22.29■■□□□ 1.16
SMARCA4-212ENST00000586985 INO80Q9ULG1 1556 aaPredicted RBP22.29■■□□□ 1.16
SMARCA4-212ENST00000586985 PTPRMP28827 1452 aa22.28■■□□□ 1.16
SMARCA4-212ENST00000586985 PTPN23Q9H3S7 1636 aa22.28■■□□□ 1.16
SMARCA4-212ENST00000586985 GGT6Q6P531 493 aa22.27■■□□□ 1.16
SMARCA4-212ENST00000586985 TCOF1Q13428 1488 aaKnown RBP22.27■■□□□ 1.16
SMARCA4-212ENST00000586985 SIGLEC1Q9BZZ2 1709 aa22.26■■□□□ 1.15
SMARCA4-212ENST00000586985 ABCC5O15440 1437 aa22.25■■□□□ 1.15
SMARCA4-212ENST00000586985 KIF3BO15066 747 aa22.25■■□□□ 1.15
SMARCA4-212ENST00000586985 MADDQ8WXG6 1647 aa22.24■■□□□ 1.15
SMARCA4-212ENST00000586985 CHIC2Q9UKJ5 165 aa22.24■■□□□ 1.15
SMARCA4-212ENST00000586985 RRP7BPQ9NSQ0 103 aa22.22■■□□□ 1.15
SMARCA4-212ENST00000586985 PPP6R1Q9UPN7 881 aa22.22■■□□□ 1.15
SMARCA4-212ENST00000586985 DAPK1P53355 1430 aa22.22■■□□□ 1.15
SMARCA4-212ENST00000586985 CEBPAP49715 358 aaPredicted RBP22.2■■□□□ 1.14
SMARCA4-212ENST00000586985 ADGBQ8N7X0 1667 aa22.19■■□□□ 1.14
SMARCA4-212ENST00000586985 MAST1Q9Y2H9 1570 aa22.18■■□□□ 1.14
SMARCA4-212ENST00000586985 RIMS1Q86UR5 1692 aaKnown RBP22.17■■□□□ 1.14
SMARCA4-212ENST00000586985 ANKRD30AQ9BXX3 1397 aa22.16■■□□□ 1.14
SMARCA4-212ENST00000586985 PLXNC1O60486 1568 aa22.16■■□□□ 1.14
SMARCA4-212ENST00000586985 SHANK2Q9UPX8 1470 aa22.15■■□□□ 1.14
SMARCA4-212ENST00000586985 CNTLNQ9NXG0 1405 aa22.15■■□□□ 1.14
SMARCA4-212ENST00000586985 ITGAEP38570 1179 aa22.15■■□□□ 1.14
SMARCA4-212ENST00000586985 DNMT1P26358 1616 aaKnown RBP22.13■■□□□ 1.13
SMARCA4-212ENST00000586985 KIF15Q9NS87 1388 aa22.13■■□□□ 1.13
SMARCA4-212ENST00000586985 FER1L4A9Z1Z3 1794 aa22.12■■□□□ 1.13
SMARCA4-212ENST00000586985 WASHC2CQ9Y4E1 1318 aa22.11■■□□□ 1.13
SMARCA4-212ENST00000586985 ZMYM3Q14202 1370 aa22.11■■□□□ 1.13
SMARCA4-212ENST00000586985 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.11■■□□□ 1.13
SMARCA4-212ENST00000586985 NCOA1Q15788 1441 aa22.09■■□□□ 1.13
SMARCA4-212ENST00000586985 DUOX2Q9NRD8 1548 aa22.09■■□□□ 1.13
SMARCA4-212ENST00000586985 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.05■■□□□ 1.123e-10■■■■□ 19.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms