RNA–Protein interactions for RNA: ENST00000586737.5

ERCC2-208, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-208ENST00000586737 MAGI2Q86UL8 1455 aa20.9■□□□□ 0.94
ERCC2-208ENST00000586737 ARID4BQ4LE39 1312 aaPredicted RBP20.89■□□□□ 0.93
ERCC2-208ENST00000586737 AFAP1Q8N556 730 aa20.88■□□□□ 0.93
ERCC2-208ENST00000586737 ADAMTSL3P82987 1691 aa20.88■□□□□ 0.93
ERCC2-208ENST00000586737 ARHGAP5Q13017 1502 aa20.88■□□□□ 0.93
ERCC2-208ENST00000586737 ZFYVE16Q7Z3T8 1539 aa20.88■□□□□ 0.93
ERCC2-208ENST00000586737 CEP162Q5TB80 1403 aa20.87■□□□□ 0.93
ERCC2-208ENST00000586737 PTPRMP28827 1452 aa20.86■□□□□ 0.93
ERCC2-208ENST00000586737 MYO5CQ9NQX4 1742 aa20.85■□□□□ 0.93
ERCC2-208ENST00000586737 ARHGEF12Q9NZN5 1544 aa20.83■□□□□ 0.93
ERCC2-208ENST00000586737 LOC105371045A0A1W2PR82 267 aa20.83■□□□□ 0.93
ERCC2-208ENST00000586737 ZNF518AQ6AHZ1 1483 aa20.82■□□□□ 0.92
ERCC2-208ENST00000586737 BCORL1Q5H9F3 1711 aa20.82■□□□□ 0.92
ERCC2-208ENST00000586737 HECW2Q9P2P5 1572 aa20.81■□□□□ 0.92
ERCC2-208ENST00000586737 TRAPPC8Q9Y2L5 1435 aa20.81■□□□□ 0.92
ERCC2-208ENST00000586737 SIGLEC1Q9BZZ2 1709 aa20.81■□□□□ 0.92
ERCC2-208ENST00000586737 ATP10AO60312 1499 aa20.81■□□□□ 0.92
ERCC2-208ENST00000586737 GPATCH8Q9UKJ3 1502 aaKnown RBP20.8■□□□□ 0.92
ERCC2-208ENST00000586737 KDM5CP41229 1560 aa20.8■□□□□ 0.92
ERCC2-208ENST00000586737 PREX2Q70Z35 1606 aa20.78■□□□□ 0.92
ERCC2-208ENST00000586737 CDC42BPBQ9Y5S2 1711 aa20.78■□□□□ 0.92
ERCC2-208ENST00000586737 MADDQ8WXG6 1647 aa20.78■□□□□ 0.92
ERCC2-208ENST00000586737 ABCC1P33527 1531 aa20.77■□□□□ 0.92
ERCC2-208ENST00000586737 C9orf84Q5VXU9 1444 aa20.77■□□□□ 0.91
ERCC2-208ENST00000586737 MLH3Q9UHC1 1453 aa20.75■□□□□ 0.91
ERCC2-208ENST00000586737 MLECQ14165 292 aa20.75■□□□□ 0.91
ERCC2-208ENST00000586737 MTUS2Q5JR59 1369 aa20.74■□□□□ 0.91
ERCC2-208ENST00000586737 ZNF777Q9ULD5 760 aaPredicted RBP20.72■□□□□ 0.91
ERCC2-208ENST00000586737 CCNB3Q8WWL7 1395 aa20.71■□□□□ 0.91
ERCC2-208ENST00000586737 CFDP1Q9UEE9 299 aaPredicted RBP20.7■□□□□ 0.9
ERCC2-208ENST00000586737 CDC42BPAQ5VT25 1732 aa20.7■□□□□ 0.9
ERCC2-208ENST00000586737 SAMD9LQ8IVG5 1584 aa20.69■□□□□ 0.9
ERCC2-208ENST00000586737 DIP2CQ9Y2E4 1556 aa20.69■□□□□ 0.9
ERCC2-208ENST00000586737 HNRNPMP52272 730 aaKnown RBP eCLIP20.69■□□□□ 0.9
ERCC2-208ENST00000586737 KIAA1107Q9UPP5 1409 aa20.68■□□□□ 0.9
ERCC2-208ENST00000586737 MYT1LQ9UL68 1186 aa20.67■□□□□ 0.9
ERCC2-208ENST00000586737 ZNF644Q9H582 1327 aaPredicted RBP20.66■□□□□ 0.9
ERCC2-208ENST00000586737 RIMS1Q86UR5 1692 aaKnown RBP20.66■□□□□ 0.9
ERCC2-208ENST00000586737 ITSN2Q9NZM3 1697 aa20.65■□□□□ 0.9
ERCC2-208ENST00000586737 ABCA6Q8N139 1617 aa20.65■□□□□ 0.9
ERCC2-208ENST00000586737 REREQ9P2R6 1566 aa20.65■□□□□ 0.9
ERCC2-208ENST00000586737 EHBP1L1Q8N3D4 1523 aa20.65■□□□□ 0.9
ERCC2-208ENST00000586737 SYCP2Q9BX26 1530 aa20.65■□□□□ 0.9
ERCC2-208ENST00000586737 LMTK3Q96Q04 1460 aa20.65■□□□□ 0.9
ERCC2-208ENST00000586737 VPS8Q8N3P4 1428 aa20.64■□□□□ 0.89
ERCC2-208ENST00000586737 PLPPR3Q6T4P5 718 aa20.62■□□□□ 0.89
ERCC2-208ENST00000586737 TIAM1Q13009 1591 aa20.62■□□□□ 0.89
ERCC2-208ENST00000586737 AGLP35573 1532 aa20.62■□□□□ 0.89
ERCC2-208ENST00000586737 PLEKHH2Q8IVE3 1493 aa20.62■□□□□ 0.89
ERCC2-208ENST00000586737 SPAG9O60271 1321 aaKnown RBP20.61■□□□□ 0.89
ERCC2-208ENST00000586737 KIDINS220Q9ULH0 1771 aa20.6■□□□□ 0.89
ERCC2-208ENST00000586737 CEBPAP49715 358 aaPredicted RBP20.6■□□□□ 0.89
ERCC2-208ENST00000586737 MBD5Q9P267 1494 aa20.6■□□□□ 0.89
ERCC2-208ENST00000586737 NCOA2Q15596 1464 aa20.59■□□□□ 0.89
ERCC2-208ENST00000586737 HSPA2P54652 639 aa20.56■□□□□ 0.88
ERCC2-208ENST00000586737 KANK4Q5T7N3 995 aaPredicted RBP20.55■□□□□ 0.88
ERCC2-208ENST00000586737 LRRC9Q6ZRR7 1453 aa20.54■□□□□ 0.88
ERCC2-208ENST00000586737 FER1L4A9Z1Z3 1794 aa20.54■□□□□ 0.88
ERCC2-208ENST00000586737 ATP7AQ04656 1500 aa20.53■□□□□ 0.88
ERCC2-208ENST00000586737 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
ERCC2-208ENST00000586737 MAP3K1Q13233 1512 aa20.5■□□□□ 0.87
ERCC2-208ENST00000586737 A2MP01023 1474 aa20.5■□□□□ 0.87
ERCC2-208ENST00000586737 ILDR1Q86SU0 546 aaPredicted RBP20.49■□□□□ 0.87
ERCC2-208ENST00000586737 PLXNC1O60486 1568 aa20.48■□□□□ 0.87
ERCC2-208ENST00000586737 RTEL1-TNFRSF6BF6WH68 1400 aa20.48■□□□□ 0.87
ERCC2-208ENST00000586737 CAMSAP2Q08AD1 1489 aa20.47■□□□□ 0.87
ERCC2-208ENST00000586737 SUPT6HQ7KZ85 1726 aaKnown RBP20.46■□□□□ 0.87
ERCC2-208ENST00000586737 CNTLNQ9NXG0 1405 aa20.44■□□□□ 0.86
ERCC2-208ENST00000586737 RSPH4AQ5TD94 716 aa20.44■□□□□ 0.86
ERCC2-208ENST00000586737 ESF1Q9H501 851 aaKnown RBP20.44■□□□□ 0.86
ERCC2-208ENST00000586737 CCDC141Q6ZP82 1450 aa20.43■□□□□ 0.86
ERCC2-208ENST00000586737 ZMYM3Q14202 1370 aa20.42■□□□□ 0.86
ERCC2-208ENST00000586737 DHX29Q7Z478 1369 aaKnown RBP20.42■□□□□ 0.86
ERCC2-208ENST00000586737 GGT6Q6P531 493 aa20.4■□□□□ 0.86
ERCC2-208ENST00000586737 UHRF1BP1Q6BDS2 1440 aa20.39■□□□□ 0.85
ERCC2-208ENST00000586737 MYOM3Q5VTT5 1437 aa20.38■□□□□ 0.85
ERCC2-208ENST00000586737 C3P01024 1663 aa20.38■□□□□ 0.85
ERCC2-208ENST00000586737 MIA2Q96PC5 1412 aa20.37■□□□□ 0.85
ERCC2-208ENST00000586737 PPP6R1Q9UPN7 881 aa20.37■□□□□ 0.85
ERCC2-208ENST00000586737 ARHGEF5Q12774 1597 aa20.37■□□□□ 0.85
ERCC2-208ENST00000586737 NPATQ14207 1427 aa20.36■□□□□ 0.85
ERCC2-208ENST00000586737 PREX1Q8TCU6 1659 aa20.35■□□□□ 0.85
ERCC2-208ENST00000586737 TSPY4P0CV99 314 aa20.34■□□□□ 0.85
ERCC2-208ENST00000586737 TSPY10P0CW01 314 aa20.34■□□□□ 0.85
ERCC2-208ENST00000586737 KIF3BO15066 747 aa20.33■□□□□ 0.85
ERCC2-208ENST00000586737 PTPRKQ15262 1439 aa20.33■□□□□ 0.84
ERCC2-208ENST00000586737 ADGBQ8N7X0 1667 aa20.32■□□□□ 0.84
ERCC2-208ENST00000586737 APLP2Q06481 763 aa20.3■□□□□ 0.84
ERCC2-208ENST00000586737 MROH2AA6NES4 1674 aa20.29■□□□□ 0.84
ERCC2-208ENST00000586737 FBXO41Q8TF61 875 aa20.28■□□□□ 0.84
ERCC2-208ENST00000586737 SETD1BQ9UPS6 1966 aaKnown RBP20.28■□□□□ 0.84
ERCC2-208ENST00000586737 CLTCQ00610 1675 aaKnown RBP20.26■□□□□ 0.83
ERCC2-208ENST00000586737 MAST1Q9Y2H9 1570 aa20.26■□□□□ 0.83
ERCC2-208ENST00000586737 ABCC5O15440 1437 aa20.25■□□□□ 0.83
ERCC2-208ENST00000586737 FBXO31Q5XUX0 539 aaPredicted RBP20.24■□□□□ 0.83
ERCC2-208ENST00000586737 DMRT2Q9Y5R5 561 aa20.24■□□□□ 0.83
ERCC2-208ENST00000586737 NCOA1Q15788 1441 aa20.24■□□□□ 0.83
ERCC2-208ENST00000586737 STRCQ7RTU9 1775 aa20.23■□□□□ 0.83
ERCC2-208ENST00000586737 FGD6Q6ZV73 1430 aa20.23■□□□□ 0.83
ERCC2-208ENST00000586737 PTPRTO14522 1441 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms