RNA–Protein interactions for RNA: ENST00000585913.5

CIRBP-205, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-205ENST00000585913 ZMYM4Q5VZL5 1548 aa34.88■■■■□ 3.17
CIRBP-205ENST00000585913 CEP162Q5TB80 1403 aa34.87■■■■□ 3.17
CIRBP-205ENST00000585913 POGZQ7Z3K3 1410 aa34.84■■■■□ 3.17
CIRBP-205ENST00000585913 ZFYVE16Q7Z3T8 1539 aa34.81■■■■□ 3.16
CIRBP-205ENST00000585913 CDC42BPBQ9Y5S2 1711 aa34.8■■■■□ 3.16
CIRBP-205ENST00000585913 PREX2Q70Z35 1606 aa34.8■■■■□ 3.16
CIRBP-205ENST00000585913 MAGI2Q86UL8 1455 aa34.79■■■■□ 3.16
CIRBP-205ENST00000585913 ARID4BQ4LE39 1312 aaPredicted RBP34.79■■■■□ 3.16
CIRBP-205ENST00000585913 HECW2Q9P2P5 1572 aa34.77■■■■□ 3.16
CIRBP-205ENST00000585913 ADAMTSL3P82987 1691 aa34.75■■■■□ 3.15
CIRBP-205ENST00000585913 BCORL1Q5H9F3 1711 aa34.75■■■■□ 3.15
CIRBP-205ENST00000585913 YEATS2Q9ULM3 1422 aa34.74■■■■□ 3.15
CIRBP-205ENST00000585913 CDC42BPAQ5VT25 1732 aa34.72■■■■□ 3.15
CIRBP-205ENST00000585913 ZNF518AQ6AHZ1 1483 aa34.71■■■■□ 3.15
CIRBP-205ENST00000585913 LOC105371045A0A1W2PR82 267 aa34.68■■■■□ 3.14
CIRBP-205ENST00000585913 MTUS2Q5JR59 1369 aa34.66■■■■□ 3.14
CIRBP-205ENST00000585913 KDM5CP41229 1560 aa34.65■■■■□ 3.14
CIRBP-205ENST00000585913 ABCC1P33527 1531 aa34.65■■■■□ 3.14
CIRBP-205ENST00000585913 MADDQ8WXG6 1647 aa34.64■■■■□ 3.14
CIRBP-205ENST00000585913 AFAP1Q8N556 730 aa34.62■■■■□ 3.13
CIRBP-205ENST00000585913 PTPRMP28827 1452 aa34.61■■■■□ 3.13
CIRBP-205ENST00000585913 SIGLEC1Q9BZZ2 1709 aa34.61■■■■□ 3.13
CIRBP-205ENST00000585913 ITSN2Q9NZM3 1697 aa34.6■■■■□ 3.13
CIRBP-205ENST00000585913 ATP10AO60312 1499 aa34.59■■■■□ 3.13
CIRBP-205ENST00000585913 GPATCH8Q9UKJ3 1502 aaKnown RBP34.59■■■■□ 3.13
CIRBP-205ENST00000585913 EHBP1L1Q8N3D4 1523 aa34.58■■■■□ 3.13
CIRBP-205ENST00000585913 C9orf84Q5VXU9 1444 aa34.57■■■■□ 3.13
CIRBP-205ENST00000585913 MYT1LQ9UL68 1186 aa34.57■■■■□ 3.12
CIRBP-205ENST00000585913 ARHGEF12Q9NZN5 1544 aa34.56■■■■□ 3.12
CIRBP-205ENST00000585913 CCNB3Q8WWL7 1395 aa34.54■■■■□ 3.12
CIRBP-205ENST00000585913 ZNF777Q9ULD5 760 aaPredicted RBP34.54■■■■□ 3.12
CIRBP-205ENST00000585913 TRAPPC8Q9Y2L5 1435 aa34.54■■■■□ 3.12
CIRBP-205ENST00000585913 RIMS1Q86UR5 1692 aaKnown RBP34.54■■■■□ 3.12
CIRBP-205ENST00000585913 SAMD9LQ8IVG5 1584 aa34.53■■■■□ 3.12
CIRBP-205ENST00000585913 MLH3Q9UHC1 1453 aa34.51■■■■□ 3.11
CIRBP-205ENST00000585913 DIP2CQ9Y2E4 1556 aa34.49■■■■□ 3.11
CIRBP-205ENST00000585913 VPS8Q8N3P4 1428 aa34.48■■■■□ 3.11
CIRBP-205ENST00000585913 MLECQ14165 292 aa34.48■■■■□ 3.11
CIRBP-205ENST00000585913 CFDP1Q9UEE9 299 aaPredicted RBP34.48■■■■□ 3.11
CIRBP-205ENST00000585913 SYCP2Q9BX26 1530 aa34.47■■■■□ 3.11
CIRBP-205ENST00000585913 ABCA6Q8N139 1617 aa34.46■■■■□ 3.11
CIRBP-205ENST00000585913 TIAM1Q13009 1591 aa34.45■■■■□ 3.11
CIRBP-205ENST00000585913 PLEKHH2Q8IVE3 1493 aa34.44■■■■□ 3.1
CIRBP-205ENST00000585913 FER1L4A9Z1Z3 1794 aa34.44■■■■□ 3.1
CIRBP-205ENST00000585913 REREQ9P2R6 1566 aa34.42■■■■□ 3.1
CIRBP-205ENST00000585913 KIDINS220Q9ULH0 1771 aa34.4■■■■□ 3.1
CIRBP-205ENST00000585913 KIAA1107Q9UPP5 1409 aa34.39■■■■□ 3.1
CIRBP-205ENST00000585913 SUPT6HQ7KZ85 1726 aaKnown RBP34.39■■■■□ 3.1
CIRBP-205ENST00000585913 HNRNPMP52272 730 aaKnown RBP eCLIP34.38■■■■□ 3.09
CIRBP-205ENST00000585913 NCOA2Q15596 1464 aa34.33■■■■□ 3.09
CIRBP-205ENST00000585913 SPAG9O60271 1321 aaKnown RBP34.32■■■■□ 3.09
CIRBP-205ENST00000585913 PLPPR3Q6T4P5 718 aa34.32■■■■□ 3.08
CIRBP-205ENST00000585913 AGLP35573 1532 aa34.3■■■■□ 3.08
CIRBP-205ENST00000585913 ATP7AQ04656 1500 aa34.28■■■■□ 3.08
CIRBP-205ENST00000585913 LRRC9Q6ZRR7 1453 aa34.27■■■■□ 3.08
CIRBP-205ENST00000585913 ZNF644Q9H582 1327 aaPredicted RBP34.27■■■■□ 3.08
CIRBP-205ENST00000585913 INO80Q9ULG1 1556 aaPredicted RBP34.26■■■■□ 3.07
CIRBP-205ENST00000585913 MAP3K1Q13233 1512 aa34.25■■■■□ 3.07
CIRBP-205ENST00000585913 LMTK3Q96Q04 1460 aa34.22■■■■□ 3.07
CIRBP-205ENST00000585913 MBD5Q9P267 1494 aa34.2■■■■□ 3.06
CIRBP-205ENST00000585913 CAMSAP2Q08AD1 1489 aa34.17■■■■□ 3.06
CIRBP-205ENST00000585913 ESF1Q9H501 851 aaKnown RBP34.15■■■■□ 3.06
CIRBP-205ENST00000585913 A2MP01023 1474 aa34.14■■■■□ 3.06
CIRBP-205ENST00000585913 KANK4Q5T7N3 995 aaPredicted RBP34.13■■■■□ 3.05
CIRBP-205ENST00000585913 PLXNC1O60486 1568 aa34.12■■■■□ 3.05
CIRBP-205ENST00000585913 ADGBQ8N7X0 1667 aa34.12■■■■□ 3.05
CIRBP-205ENST00000585913 CEBPAP49715 358 aaPredicted RBP34.11■■■■□ 3.05
CIRBP-205ENST00000585913 FBXO41Q8TF61 875 aa34.11■■■■□ 3.05
CIRBP-205ENST00000585913 CCDC141Q6ZP82 1450 aa34.11■■■■□ 3.05
CIRBP-205ENST00000585913 APLP2Q06481 763 aa34.09■■■■□ 3.05
CIRBP-205ENST00000585913 RTEL1-TNFRSF6BF6WH68 1400 aa34.09■■■■□ 3.05
CIRBP-205ENST00000585913 C3P01024 1663 aa34.07■■■■□ 3.04
CIRBP-205ENST00000585913 PREX1Q8TCU6 1659 aa34.06■■■■□ 3.04
CIRBP-205ENST00000585913 CNTLNQ9NXG0 1405 aa34.06■■■■□ 3.04
CIRBP-205ENST00000585913 RSPH4AQ5TD94 716 aa34.06■■■■□ 3.04
CIRBP-205ENST00000585913 ARHGEF5Q12774 1597 aa34.03■■■■□ 3.04
CIRBP-205ENST00000585913 HSPA2P54652 639 aa34.02■■■■□ 3.04
CIRBP-205ENST00000585913 MYOM3Q5VTT5 1437 aa34.01■■■■□ 3.03
CIRBP-205ENST00000585913 MROH2AA6NES4 1674 aa33.99■■■■□ 3.03
CIRBP-205ENST00000585913 MIA2Q96PC5 1412 aa33.97■■■■□ 3.03
CIRBP-205ENST00000585913 UHRF1BP1Q6BDS2 1440 aa33.96■■■■□ 3.03
CIRBP-205ENST00000585913 SETD1BQ9UPS6 1966 aaKnown RBP33.95■■■■□ 3.03
CIRBP-205ENST00000585913 DHX29Q7Z478 1369 aaKnown RBP33.95■■■■□ 3.02
CIRBP-205ENST00000585913 TSPY4P0CV99 314 aa33.94■■■■□ 3.02
CIRBP-205ENST00000585913 TSPY10P0CW01 314 aa33.94■■■■□ 3.02
CIRBP-205ENST00000585913 GGT6Q6P531 493 aa33.94■■■■□ 3.02
CIRBP-205ENST00000585913 CLTCQ00610 1675 aaKnown RBP33.93■■■■□ 3.02
CIRBP-205ENST00000585913 ZMYM3Q14202 1370 aa33.88■■■■□ 3.01
CIRBP-205ENST00000585913 MAST1Q9Y2H9 1570 aa33.86■■■■□ 3.01
CIRBP-205ENST00000585913 PPP6R1Q9UPN7 881 aa33.86■■■■□ 3.01
CIRBP-205ENST00000585913 NPATQ14207 1427 aa33.84■■■■□ 3.01
CIRBP-205ENST00000585913 KIF3BO15066 747 aa33.83■■■■□ 3.01
CIRBP-205ENST00000585913 PTPN23Q9H3S7 1636 aa33.82■■■■□ 3
CIRBP-205ENST00000585913 FGD6Q6ZV73 1430 aa33.75■■■□□ 2.99
CIRBP-205ENST00000585913 FAM135AQ9P2D6 1515 aa33.74■■■□□ 2.99
CIRBP-205ENST00000585913 CROCC2H7BZ55 1655 aa33.73■■■□□ 2.99
CIRBP-205ENST00000585913 KDM5DQ9BY66 1539 aa33.73■■■□□ 2.99
CIRBP-205ENST00000585913 PTPRKQ15262 1439 aa33.72■■■□□ 2.99
CIRBP-205ENST00000585913 STRCQ7RTU9 1775 aa33.71■■■□□ 2.99
CIRBP-205ENST00000585913 TCOF1Q13428 1488 aaKnown RBP33.69■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms