RNA–Protein interactions for RNA: ENST00000585854.1

CHAF1A-203, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 2

Gene CHAF1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-203ENST00000585854 PLPPR3Q6T4P5 718 aa33.49■■■□□ 2.95
CHAF1A-203ENST00000585854 KIF14Q15058 1648 aa33.48■■■□□ 2.95
CHAF1A-203ENST00000585854 POGZQ7Z3K3 1410 aa33.46■■■□□ 2.95
CHAF1A-203ENST00000585854 LRRIQ1Q96JM4 1722 aa33.46■■■□□ 2.95
CHAF1A-203ENST00000585854 SIGLEC1Q9BZZ2 1709 aa33.45■■■□□ 2.95
CHAF1A-203ENST00000585854 EFCAB2Q5VUJ9 269 aa33.44■■■□□ 2.94
CHAF1A-203ENST00000585854 MAGI2Q86UL8 1455 aa33.44■■■□□ 2.94
CHAF1A-203ENST00000585854 MLECQ14165 292 aa33.43■■■□□ 2.94
CHAF1A-203ENST00000585854 TROQ12816 1431 aaPredicted RBP33.41■■■□□ 2.94
CHAF1A-203ENST00000585854 PCF11O94913 1555 aaKnown RBP33.4■■■□□ 2.94
CHAF1A-203ENST00000585854 CLIP1P30622 1438 aa33.4■■■□□ 2.94
CHAF1A-203ENST00000585854 ARHGAP5Q13017 1502 aa33.38■■■□□ 2.93
CHAF1A-203ENST00000585854 FER1L4A9Z1Z3 1794 aa33.36■■■□□ 2.93
CHAF1A-203ENST00000585854 LMTK3Q96Q04 1460 aa33.34■■■□□ 2.93
CHAF1A-203ENST00000585854 MYT1LQ9UL68 1186 aa33.32■■■□□ 2.92
CHAF1A-203ENST00000585854 ATP10AO60312 1499 aa33.31■■■□□ 2.92
CHAF1A-203ENST00000585854 CDC42BPBQ9Y5S2 1711 aa33.28■■■□□ 2.92
CHAF1A-203ENST00000585854 C9orf84Q5VXU9 1444 aa33.28■■■□□ 2.92
CHAF1A-203ENST00000585854 ZNF518AQ6AHZ1 1483 aa33.26■■■□□ 2.92
CHAF1A-203ENST00000585854 AFAP1Q8N556 730 aa33.25■■■□□ 2.91
CHAF1A-203ENST00000585854 CASKIN1Q8WXD9 1431 aa33.25■■■□□ 2.91
CHAF1A-203ENST00000585854 CCDC18Q5T9S5 1454 aa33.25■■■□□ 2.91
CHAF1A-203ENST00000585854 HSPA2P54652 639 aa33.24■■■□□ 2.91
CHAF1A-203ENST00000585854 PREX2Q70Z35 1606 aa33.2■■■□□ 2.91
CHAF1A-203ENST00000585854 KDM5CP41229 1560 aa33.19■■■□□ 2.9
CHAF1A-203ENST00000585854 ARHGEF12Q9NZN5 1544 aa33.18■■■□□ 2.9
CHAF1A-203ENST00000585854 FBXO41Q8TF61 875 aa33.15■■■□□ 2.9
CHAF1A-203ENST00000585854 CDC42BPAQ5VT25 1732 aa33.13■■■□□ 2.89
CHAF1A-203ENST00000585854 DIP2CQ9Y2E4 1556 aa33.13■■■□□ 2.89
CHAF1A-203ENST00000585854 FYCO1Q9BQS8 1478 aa33.12■■■□□ 2.89
CHAF1A-203ENST00000585854 ITSN2Q9NZM3 1697 aa33.12■■■□□ 2.89
CHAF1A-203ENST00000585854 ABCC1P33527 1531 aa33.12■■■□□ 2.89
CHAF1A-203ENST00000585854 ABCA6Q8N139 1617 aa33.1■■■□□ 2.89
CHAF1A-203ENST00000585854 CEBPAP49715 358 aaPredicted RBP33.1■■■□□ 2.89
CHAF1A-203ENST00000585854 TRAPPC8Q9Y2L5 1435 aa33.09■■■□□ 2.89
CHAF1A-203ENST00000585854 PREX1Q8TCU6 1659 aa33.06■■■□□ 2.88
CHAF1A-203ENST00000585854 ZNF777Q9ULD5 760 aaPredicted RBP33.05■■■□□ 2.88
CHAF1A-203ENST00000585854 MLH3Q9UHC1 1453 aa33.05■■■□□ 2.88
CHAF1A-203ENST00000585854 REREQ9P2R6 1566 aa33.02■■■□□ 2.88
CHAF1A-203ENST00000585854 KIDINS220Q9ULH0 1771 aa32.98■■■□□ 2.87
CHAF1A-203ENST00000585854 ESF1Q9H501 851 aaKnown RBP32.97■■■□□ 2.87
CHAF1A-203ENST00000585854 SAMD9LQ8IVG5 1584 aa32.96■■■□□ 2.87
CHAF1A-203ENST00000585854 SETD1BQ9UPS6 1966 aaKnown RBP32.94■■■□□ 2.86
CHAF1A-203ENST00000585854 SYCP2Q9BX26 1530 aa32.93■■■□□ 2.86
CHAF1A-203ENST00000585854 C3P01024 1663 aa32.93■■■□□ 2.86
CHAF1A-203ENST00000585854 AGLP35573 1532 aa32.92■■■□□ 2.86
CHAF1A-203ENST00000585854 GPATCH8Q9UKJ3 1502 aaKnown RBP32.92■■■□□ 2.86
CHAF1A-203ENST00000585854 UHRF1BP1Q6BDS2 1440 aa32.91■■■□□ 2.86
CHAF1A-203ENST00000585854 HNRNPMP52272 730 aaKnown RBP eCLIP32.89■■■□□ 2.86
CHAF1A-203ENST00000585854 MTUS2Q5JR59 1369 aa32.87■■■□□ 2.85
CHAF1A-203ENST00000585854 CCNB3Q8WWL7 1395 aa32.86■■■□□ 2.85
CHAF1A-203ENST00000585854 SPAG9O60271 1321 aaKnown RBP32.86■■■□□ 2.85
CHAF1A-203ENST00000585854 CFDP1Q9UEE9 299 aaPredicted RBP32.86■■■□□ 2.85
CHAF1A-203ENST00000585854 SUPT6HQ7KZ85 1726 aaKnown RBP32.85■■■□□ 2.85
CHAF1A-203ENST00000585854 STRCQ7RTU9 1775 aa32.83■■■□□ 2.85
CHAF1A-203ENST00000585854 CERKQ8TCT0 537 aa32.82■■■□□ 2.84
CHAF1A-203ENST00000585854 PLEKHH2Q8IVE3 1493 aa32.79■■■□□ 2.84
CHAF1A-203ENST00000585854 ATP7AQ04656 1500 aa32.78■■■□□ 2.84
CHAF1A-203ENST00000585854 CNTLNQ9NXG0 1405 aa32.77■■■□□ 2.84
CHAF1A-203ENST00000585854 KIAA1107Q9UPP5 1409 aa32.76■■■□□ 2.83
CHAF1A-203ENST00000585854 DMRT2Q9Y5R5 561 aa32.75■■■□□ 2.83
CHAF1A-203ENST00000585854 INO80Q9ULG1 1556 aaPredicted RBP32.73■■■□□ 2.83
CHAF1A-203ENST00000585854 EHBP1L1Q8N3D4 1523 aa32.72■■■□□ 2.83
CHAF1A-203ENST00000585854 TIAM1Q13009 1591 aa32.71■■■□□ 2.83
CHAF1A-203ENST00000585854 CEP162Q5TB80 1403 aa32.71■■■□□ 2.83
CHAF1A-203ENST00000585854 MROH2AA6NES4 1674 aa32.7■■■□□ 2.83
CHAF1A-203ENST00000585854 CLTCQ00610 1675 aaKnown RBP32.69■■■□□ 2.82
CHAF1A-203ENST00000585854 A2MP01023 1474 aa32.68■■■□□ 2.82
CHAF1A-203ENST00000585854 ZNF644Q9H582 1327 aaPredicted RBP32.68■■■□□ 2.82
CHAF1A-203ENST00000585854 PLXNC1O60486 1568 aa32.64■■■□□ 2.82
CHAF1A-203ENST00000585854 ZMYM3Q14202 1370 aa32.64■■■□□ 2.82
CHAF1A-203ENST00000585854 GGT6Q6P531 493 aa32.64■■■□□ 2.82
CHAF1A-203ENST00000585854 ADGBQ8N7X0 1667 aa32.63■■■□□ 2.81
CHAF1A-203ENST00000585854 NPATQ14207 1427 aa32.59■■■□□ 2.81
CHAF1A-203ENST00000585854 PTPRTO14522 1441 aa32.58■■■□□ 2.81
CHAF1A-203ENST00000585854 CAMSAP1Q5T5Y3 1602 aa32.55■■■□□ 2.8
CHAF1A-203ENST00000585854 MBD5Q9P267 1494 aa32.54■■■□□ 2.8
CHAF1A-203ENST00000585854 NCOA1Q15788 1441 aa32.54■■■□□ 2.8
CHAF1A-203ENST00000585854 NCOA2Q15596 1464 aa32.52■■■□□ 2.8
CHAF1A-203ENST00000585854 MYO3AQ8NEV4 1616 aa32.51■■■□□ 2.79
CHAF1A-203ENST00000585854 CAMSAP2Q08AD1 1489 aa32.48■■■□□ 2.79
CHAF1A-203ENST00000585854 RTEL1-TNFRSF6BF6WH68 1400 aa32.47■■■□□ 2.79
CHAF1A-203ENST00000585854 PTPRKQ15262 1439 aa32.46■■■□□ 2.79
CHAF1A-203ENST00000585854 CCDC141Q6ZP82 1450 aa32.45■■■□□ 2.79
CHAF1A-203ENST00000585854 ZNF142P52746 1687 aaPredicted RBP32.45■■■□□ 2.79
CHAF1A-203ENST00000585854 NCKAP5LQ9HCH0 1330 aa32.45■■■□□ 2.78
CHAF1A-203ENST00000585854 PPP6R1Q9UPN7 881 aa32.43■■■□□ 2.78
CHAF1A-203ENST00000585854 DHX29Q7Z478 1369 aaKnown RBP32.43■■■□□ 2.78
CHAF1A-203ENST00000585854 CEP170BQ9Y4F5 1589 aaPredicted RBP32.42■■■□□ 2.78
CHAF1A-203ENST00000585854 LOC105371045A0A1W2PR82 267 aa32.42■■■□□ 2.78
CHAF1A-203ENST00000585854 KIF3BO15066 747 aa32.41■■■□□ 2.78
CHAF1A-203ENST00000585854 LTBP4Q8N2S1 1624 aa32.4■■■□□ 2.78
CHAF1A-203ENST00000585854 RSPH4AQ5TD94 716 aa32.36■■■□□ 2.77
CHAF1A-203ENST00000585854 VPS8Q8N3P4 1428 aa32.35■■■□□ 2.77
CHAF1A-203ENST00000585854 PLA2R1Q13018 1463 aa32.32■■■□□ 2.76
CHAF1A-203ENST00000585854 LRRC9Q6ZRR7 1453 aa32.32■■■□□ 2.76
CHAF1A-203ENST00000585854 TSPY4P0CV99 314 aa32.32■■■□□ 2.76
CHAF1A-203ENST00000585854 TSPY10P0CW01 314 aa32.32■■■□□ 2.76
CHAF1A-203ENST00000585854 ARHGEF5Q12774 1597 aa32.32■■■□□ 2.76
CHAF1A-203ENST00000585854 PKD2Q13563 968 aa32.31■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms