RNA–Protein interactions for RNA: ENST00000582276.1

PGAP3-208, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-208ENST00000582276 CCNB3Q8WWL7 1395 aa28.54■■■□□ 2.16
PGAP3-208ENST00000582276 AEBP2Q6ZN18 517 aaPredicted RBP28.54■■■□□ 2.16
PGAP3-208ENST00000582276 CDC42BPBQ9Y5S2 1711 aa28.54■■■□□ 2.16
PGAP3-208ENST00000582276 CDC42BPAQ5VT25 1732 aa28.53■■■□□ 2.16
PGAP3-208ENST00000582276 PREX2Q70Z35 1606 aa28.53■■■□□ 2.16
PGAP3-208ENST00000582276 SUPT6HQ7KZ85 1726 aaKnown RBP28.52■■■□□ 2.16
PGAP3-208ENST00000582276 RAPGEF3O95398 923 aa28.51■■■□□ 2.15
PGAP3-208ENST00000582276 GPATCH8Q9UKJ3 1502 aaKnown RBP28.5■■■□□ 2.15
PGAP3-208ENST00000582276 ADGRL1O94910 1474 aa28.49■■■□□ 2.15
PGAP3-208ENST00000582276 NCOA2Q15596 1464 aa28.49■■■□□ 2.15
PGAP3-208ENST00000582276 ZNF777Q9ULD5 760 aaPredicted RBP28.48■■■□□ 2.15
PGAP3-208ENST00000582276 DENND4BO75064 1496 aaPredicted RBP28.46■■■□□ 2.15
PGAP3-208ENST00000582276 SCAPERQ9BY12 1400 aa28.46■■■□□ 2.15
PGAP3-208ENST00000582276 CFDP1Q9UEE9 299 aaPredicted RBP28.46■■■□□ 2.15
PGAP3-208ENST00000582276 ITSN2Q9NZM3 1697 aa28.41■■■□□ 2.14
PGAP3-208ENST00000582276 FRMPD1Q5SYB0 1578 aa28.4■■■□□ 2.14
PGAP3-208ENST00000582276 RICTORQ6R327 1708 aa28.38■■■□□ 2.13
PGAP3-208ENST00000582276 POGZQ7Z3K3 1410 aa28.36■■■□□ 2.13
PGAP3-208ENST00000582276 SAMD9LQ8IVG5 1584 aa28.36■■■□□ 2.13
PGAP3-208ENST00000582276 ABCC1P33527 1531 aa28.34■■■□□ 2.13
PGAP3-208ENST00000582276 AFAP1Q8N556 730 aa28.32■■■□□ 2.12
PGAP3-208ENST00000582276 ZNF644Q9H582 1327 aaPredicted RBP28.32■■■□□ 2.12
PGAP3-208ENST00000582276 ARHGEF12Q9NZN5 1544 aa28.32■■■□□ 2.12
PGAP3-208ENST00000582276 HNRNPMP52272 730 aaKnown RBP eCLIP28.31■■■□□ 2.12
PGAP3-208ENST00000582276 ZNF518AQ6AHZ1 1483 aa28.3■■■□□ 2.12
PGAP3-208ENST00000582276 PLEKHH2Q8IVE3 1493 aa28.29■■■□□ 2.12
PGAP3-208ENST00000582276 SYCP2Q9BX26 1530 aa28.28■■■□□ 2.12
PGAP3-208ENST00000582276 TRAPPC8Q9Y2L5 1435 aa28.28■■■□□ 2.12
PGAP3-208ENST00000582276 MYT1LQ9UL68 1186 aa28.28■■■□□ 2.12
PGAP3-208ENST00000582276 MYOM3Q5VTT5 1437 aa28.27■■■□□ 2.12
PGAP3-208ENST00000582276 PPARGC1BQ86YN6 1023 aaKnown RBP28.27■■■□□ 2.12
PGAP3-208ENST00000582276 ZMYM4Q5VZL5 1548 aa28.27■■■□□ 2.12
PGAP3-208ENST00000582276 KIAA1107Q9UPP5 1409 aa28.26■■■□□ 2.11
PGAP3-208ENST00000582276 CAMSAP2Q08AD1 1489 aa28.23■■■□□ 2.11
PGAP3-208ENST00000582276 MAGI2Q86UL8 1455 aa28.22■■■□□ 2.11
PGAP3-208ENST00000582276 ZFYVE16Q7Z3T8 1539 aa28.22■■■□□ 2.11
PGAP3-208ENST00000582276 KDM5CP41229 1560 aa28.21■■■□□ 2.11
PGAP3-208ENST00000582276 YEATS2Q9ULM3 1422 aa28.2■■■□□ 2.11
PGAP3-208ENST00000582276 MIA2Q96PC5 1412 aa28.19■■■□□ 2.1
PGAP3-208ENST00000582276 ARHGEF40Q8TER5 1519 aa28.19■■■□□ 2.1
PGAP3-208ENST00000582276 KDM4FA0A1W2PPD8 638 aa28.18■■■□□ 2.1
PGAP3-208ENST00000582276 HECW2Q9P2P5 1572 aa28.17■■■□□ 2.1
PGAP3-208ENST00000582276 SPAG9O60271 1321 aaKnown RBP28.16■■■□□ 2.1
PGAP3-208ENST00000582276 MBD5Q9P267 1494 aa28.15■■■□□ 2.1
PGAP3-208ENST00000582276 MLH3Q9UHC1 1453 aa28.15■■■□□ 2.1
PGAP3-208ENST00000582276 FGD6Q6ZV73 1430 aa28.13■■■□□ 2.09
PGAP3-208ENST00000582276 ARID4BQ4LE39 1312 aaPredicted RBP28.13■■■□□ 2.09
PGAP3-208ENST00000582276 PTPN23Q9H3S7 1636 aa28.1■■■□□ 2.09
PGAP3-208ENST00000582276 ATP10AO60312 1499 aa28.1■■■□□ 2.09
PGAP3-208ENST00000582276 RSPH4AQ5TD94 716 aa28.1■■■□□ 2.09
PGAP3-208ENST00000582276 CCDC141Q6ZP82 1450 aa28.09■■■□□ 2.09
PGAP3-208ENST00000582276 KIDINS220Q9ULH0 1771 aa28.09■■■□□ 2.09
PGAP3-208ENST00000582276 ARHGEF5Q12774 1597 aa28.07■■■□□ 2.08
PGAP3-208ENST00000582276 ATP7AQ04656 1500 aa28.06■■■□□ 2.08
PGAP3-208ENST00000582276 DIP2CQ9Y2E4 1556 aa28.06■■■□□ 2.08
PGAP3-208ENST00000582276 ABCA6Q8N139 1617 aa28.06■■■□□ 2.08
PGAP3-208ENST00000582276 C9orf84Q5VXU9 1444 aa28.05■■■□□ 2.08
PGAP3-208ENST00000582276 TSPY4P0CV99 314 aa28.04■■■□□ 2.08
PGAP3-208ENST00000582276 TSPY10P0CW01 314 aa28.04■■■□□ 2.08
PGAP3-208ENST00000582276 INO80Q9ULG1 1556 aaPredicted RBP28.03■■■□□ 2.08
PGAP3-208ENST00000582276 TCOF1Q13428 1488 aaKnown RBP28.02■■■□□ 2.08
PGAP3-208ENST00000582276 FAM50AQ14320 339 aaKnown RBP28.02■■■□□ 2.08
PGAP3-208ENST00000582276 SIGLEC1Q9BZZ2 1709 aa28■■■□□ 2.07
PGAP3-208ENST00000582276 RTEL1-TNFRSF6BF6WH68 1400 aa27.99■■■□□ 2.07
PGAP3-208ENST00000582276 MLECQ14165 292 aa27.97■■■□□ 2.07
PGAP3-208ENST00000582276 REREQ9P2R6 1566 aa27.94■■■□□ 2.06
PGAP3-208ENST00000582276 ABCC5O15440 1437 aa27.93■■■□□ 2.06
PGAP3-208ENST00000582276 BCORL1Q5H9F3 1711 aa27.93■■■□□ 2.06
PGAP3-208ENST00000582276 DAPK1P53355 1430 aa27.92■■■□□ 2.06
PGAP3-208ENST00000582276 DNMT1P26358 1616 aaKnown RBP27.92■■■□□ 2.06
PGAP3-208ENST00000582276 A2MP01023 1474 aa27.91■■■□□ 2.06
PGAP3-208ENST00000582276 ADGBQ8N7X0 1667 aa27.91■■■□□ 2.06
PGAP3-208ENST00000582276 MAST1Q9Y2H9 1570 aa27.9■■■□□ 2.06
PGAP3-208ENST00000582276 CROCC2H7BZ55 1655 aa27.88■■■□□ 2.05
PGAP3-208ENST00000582276 CHIC2Q9UKJ5 165 aa27.87■■■□□ 2.05
PGAP3-208ENST00000582276 ADAMTSL3P82987 1691 aa27.87■■■□□ 2.05
PGAP3-208ENST00000582276 AGLP35573 1532 aa27.87■■■□□ 2.05
PGAP3-208ENST00000582276 SHANK2Q9UPX8 1470 aa27.86■■■□□ 2.05
PGAP3-208ENST00000582276 DHX29Q7Z478 1369 aaKnown RBP27.84■■■□□ 2.05
PGAP3-208ENST00000582276 PLXNC1O60486 1568 aa27.83■■■□□ 2.05
PGAP3-208ENST00000582276 MADDQ8WXG6 1647 aa27.82■■■□□ 2.04
PGAP3-208ENST00000582276 ITGAEP38570 1179 aa27.81■■■□□ 2.04
PGAP3-208ENST00000582276 RRP7BPQ9NSQ0 103 aa27.8■■■□□ 2.04
PGAP3-208ENST00000582276 RRBP1Q9P2E9 1410 aaKnown RBP27.79■■■□□ 2.04
PGAP3-208ENST00000582276 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.78■■■□□ 2.04
PGAP3-208ENST00000582276 ANKRD30AQ9BXX3 1397 aa27.77■■■□□ 2.04
PGAP3-208ENST00000582276 GGT6Q6P531 493 aa27.77■■■□□ 2.04
PGAP3-208ENST00000582276 RIMS1Q86UR5 1692 aaKnown RBP27.77■■■□□ 2.04
PGAP3-208ENST00000582276 FER1L4A9Z1Z3 1794 aa27.76■■■□□ 2.03
PGAP3-208ENST00000582276 KIF15Q9NS87 1388 aa27.76■■■□□ 2.03
PGAP3-208ENST00000582276 KIF3BO15066 747 aa27.76■■■□□ 2.03
PGAP3-208ENST00000582276 ESF1Q9H501 851 aaKnown RBP27.75■■■□□ 2.03
PGAP3-208ENST00000582276 DUOX2Q9NRD8 1548 aa27.73■■■□□ 2.03
PGAP3-208ENST00000582276 PTPRMP28827 1452 aa27.73■■■□□ 2.03
PGAP3-208ENST00000582276 PLPPR3Q6T4P5 718 aa27.73■■■□□ 2.03
PGAP3-208ENST00000582276 PTPRKQ15262 1439 aa27.73■■■□□ 2.03
PGAP3-208ENST00000582276 NCOA1Q15788 1441 aa27.71■■■□□ 2.03
PGAP3-208ENST00000582276 ADGRL2O95490 1459 aa27.7■■■□□ 2.02
PGAP3-208ENST00000582276 ERBINQ96RT1 1412 aa27.64■■■□□ 2.02
PGAP3-208ENST00000582276 EIF2AK4Q9P2K8 1649 aaKnown RBP27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms