RNA–Protein interactions for RNA: ENST00000582276.1

PGAP3-208, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-208ENST00000582276 NISCHQ9Y2I1 1504 aa43.77■■■■■ 4.6
PGAP3-208ENST00000582276 CCDC180Q9P1Z9 1646 aa38.8■■■■□ 3.8
PGAP3-208ENST00000582276 ABCC9O60706 1549 aa37.9■■■■□ 3.66
PGAP3-208ENST00000582276 DCAF8L2P0C7V8 631 aa36.67■■■■□ 3.46
PGAP3-208ENST00000582276 ZCCHC6Q5VYS8 1495 aaKnown RBP36.48■■■■□ 3.43
PGAP3-208ENST00000582276 RB1CC1Q8TDY2 1594 aa36.48■■■■□ 3.43
PGAP3-208ENST00000582276 NACADO15069 1562 aa36.45■■■■□ 3.43
PGAP3-208ENST00000582276 MYO15BQ96JP2 1530 aa36.24■■■■□ 3.39
PGAP3-208ENST00000582276 DCAF1Q9Y4B6 1507 aa36.17■■■■□ 3.38
PGAP3-208ENST00000582276 UNC13AQ9UPW8 1703 aa35.65■■■■□ 3.3
PGAP3-208ENST00000582276 SCRIBQ14160 1630 aa35.5■■■■□ 3.27
PGAP3-208ENST00000582276 PABPN1Q86U42 306 aaKnown RBP eCLIP35.48■■■■□ 3.27
PGAP3-208ENST00000582276 BICRAQ9NZM4 1560 aa35.34■■■■□ 3.25
PGAP3-208ENST00000582276 DNAJC5BQ9UF47 199 aa34.96■■■■□ 3.19
PGAP3-208ENST00000582276 SHROOM4Q9ULL8 1493 aa34.93■■■■□ 3.18
PGAP3-208ENST00000582276 EIF4G1Q04637 1599 aaKnown RBP34.41■■■■□ 3.1
PGAP3-208ENST00000582276 CC2D2AQ9P2K1 1620 aa34.25■■■■□ 3.07
PGAP3-208ENST00000582276 CECR2Q9BXF3 1484 aa34.11■■■■□ 3.05
PGAP3-208ENST00000582276 SMARCA4P51532 1647 aa33.93■■■■□ 3.02
PGAP3-208ENST00000582276 BAZ1AQ9NRL2 1556 aaPredicted RBP33.91■■■■□ 3.02
PGAP3-208ENST00000582276 MROH2BQ7Z745 1585 aa33.76■■■□□ 2.99
PGAP3-208ENST00000582276 ATAD2BQ9ULI0 1458 aa33.69■■■□□ 2.98
PGAP3-208ENST00000582276 SMARCA2P51531 1590 aa33.67■■■□□ 2.98
PGAP3-208ENST00000582276 NCAPD3P42695 1498 aa33.63■■■□□ 2.97
PGAP3-208ENST00000582276 PEG3Q9GZU2 1588 aa33.54■■■□□ 2.96
PGAP3-208ENST00000582276 HMGXB3Q12766 1538 aa33.48■■■□□ 2.95
PGAP3-208ENST00000582276 BAZ1BQ9UIG0 1483 aaKnown RBP33.46■■■□□ 2.95
PGAP3-208ENST00000582276 RSF1Q96T23 1441 aaPredicted RBP33.43■■■□□ 2.94
PGAP3-208ENST00000582276 WIZO95785 1651 aa33.42■■■□□ 2.94
PGAP3-208ENST00000582276 TOP2AP11388 1531 aaKnown RBP33.04■■■□□ 2.88
PGAP3-208ENST00000582276 SUPT5HO00267 1087 aaKnown RBP32.85■■■□□ 2.85
PGAP3-208ENST00000582276 NESP48681 1621 aa32.84■■■□□ 2.85
PGAP3-208ENST00000582276 LAMC3Q9Y6N6 1575 aa32.73■■■□□ 2.83
PGAP3-208ENST00000582276 CADPSQ9ULU8 1353 aa32.7■■■□□ 2.82
PGAP3-208ENST00000582276 CCDC88BA6NC98 1476 aa32.68■■■□□ 2.82
PGAP3-208ENST00000582276 ERCC6Q03468 1493 aa32.67■■■□□ 2.82
PGAP3-208ENST00000582276 PDS5BQ9NTI5 1447 aa32.53■■■□□ 2.8
PGAP3-208ENST00000582276 CFTRP13569 1480 aa32.52■■■□□ 2.8
PGAP3-208ENST00000582276 KIF21AQ7Z4S6 1674 aa32.43■■■□□ 2.78
PGAP3-208ENST00000582276 FANCD2Q9BXW9 1451 aa32.33■■■□□ 2.77
PGAP3-208ENST00000582276 PRDM2Q13029 1718 aa32.28■■■□□ 2.76
PGAP3-208ENST00000582276 CEP164Q9UPV0 1460 aa32.28■■■□□ 2.76
PGAP3-208ENST00000582276 THOC2Q8NI27 1593 aaKnown RBP32.24■■■□□ 2.75
PGAP3-208ENST00000582276 CUX2O14529 1486 aa32.22■■■□□ 2.75
PGAP3-208ENST00000582276 MRC2Q9UBG0 1479 aa32.18■■■□□ 2.74
PGAP3-208ENST00000582276 WDR62O43379 1518 aa32.05■■■□□ 2.72
PGAP3-208ENST00000582276 URB2Q14146 1524 aaKnown RBP31.99■■■□□ 2.71
PGAP3-208ENST00000582276 DNAJC5Q9H3Z4 198 aa31.94■■■□□ 2.7
PGAP3-208ENST00000582276 TOPBP1Q92547 1522 aa31.83■■■□□ 2.69
PGAP3-208ENST00000582276 ABCC8Q09428 1581 aa31.81■■■□□ 2.68
PGAP3-208ENST00000582276 DNMBPQ6XZF7 1577 aa31.8■■■□□ 2.68
PGAP3-208ENST00000582276 CUX1P39880 1505 aa31.65■■■□□ 2.66
PGAP3-208ENST00000582276 IFT140Q96RY7 1462 aa31.58■■■□□ 2.65
PGAP3-208ENST00000582276 POLA1P09884 1462 aaPredicted RBP31.57■■■□□ 2.64
PGAP3-208ENST00000582276 FGD5Q6ZNL6 1462 aa31.53■■■□□ 2.64
PGAP3-208ENST00000582276 WRNQ14191 1432 aaPredicted RBP eCLIP31.53■■■□□ 2.64
PGAP3-208ENST00000582276 SOGA1O94964 1423 aa31.48■■■□□ 2.63
PGAP3-208ENST00000582276 RAD54L2Q9Y4B4 1467 aa31.46■■■□□ 2.63
PGAP3-208ENST00000582276 TARBP1Q13395 1621 aaKnown RBP31.45■■■□□ 2.62
PGAP3-208ENST00000582276 ZNF608Q9ULD9 1512 aaPredicted RBP31.44■■■□□ 2.62
PGAP3-208ENST00000582276 SYNJ1O43426 1573 aa31.43■■■□□ 2.62
PGAP3-208ENST00000582276 TOP2BQ02880 1626 aa31.42■■■□□ 2.62
PGAP3-208ENST00000582276 BIVM-ERCC5R4GMW8 1640 aa31.4■■■□□ 2.62
PGAP3-208ENST00000582276 AQRO60306 1485 aaKnown RBP eCLIP31.31■■■□□ 2.6
PGAP3-208ENST00000582276 EIF4G3O43432 1585 aaKnown RBP31.3■■■□□ 2.6
PGAP3-208ENST00000582276 TDRD9Q8NDG6 1382 aaKnown RBP31.3■■■□□ 2.6
PGAP3-208ENST00000582276 WDR97A6NE52 1622 aa31.21■■■□□ 2.59
PGAP3-208ENST00000582276 ABCA10Q8WWZ4 1543 aa31.21■■■□□ 2.59
PGAP3-208ENST00000582276 GAPVD1Q14C86 1478 aa31.1■■■□□ 2.57
PGAP3-208ENST00000582276 GRIN2BQ13224 1484 aa31.06■■■□□ 2.56
PGAP3-208ENST00000582276 ABCA5Q8WWZ7 1642 aa31.06■■■□□ 2.56
PGAP3-208ENST00000582276 PBRM1Q86U86 1689 aa31.01■■■□□ 2.55
PGAP3-208ENST00000582276 SNAPC4Q5SXM2 1469 aa31.01■■■□□ 2.55
PGAP3-208ENST00000582276 FBLN2P98095 1184 aa30.98■■■□□ 2.55
PGAP3-208ENST00000582276 TRIM41Q8WV44 630 aa30.98■■■□□ 2.55
PGAP3-208ENST00000582276 OSCARQ8IYS5 282 aa30.95■■■□□ 2.55
PGAP3-208ENST00000582276 MAGI1Q96QZ7 1491 aaPredicted RBP30.94■■■□□ 2.54
PGAP3-208ENST00000582276 CHD1O14646 1710 aa30.9■■■□□ 2.54
PGAP3-208ENST00000582276 CHMP7Q8WUX9 453 aaPredicted RBP30.88■■■□□ 2.53
PGAP3-208ENST00000582276 KIF27Q86VH2 1401 aa30.86■■■□□ 2.53
PGAP3-208ENST00000582276 ERICH3Q5RHP9 1530 aa30.83■■■□□ 2.53
PGAP3-208ENST00000582276 SYNJ2O15056 1496 aa30.83■■■□□ 2.53
PGAP3-208ENST00000582276 ADAMTS12P58397 1594 aa30.75■■■□□ 2.51
PGAP3-208ENST00000582276 FHAD1B1AJZ9 1412 aa30.73■■■□□ 2.51
PGAP3-208ENST00000582276 IGF1RP08069 1367 aa30.71■■■□□ 2.51
PGAP3-208ENST00000582276 CHIC1Q5VXU3 224 aa30.69■■■□□ 2.5
PGAP3-208ENST00000582276 RUSC2Q8N2Y8 1516 aa30.66■■■□□ 2.5
PGAP3-208ENST00000582276 GRIN2AQ12879 1464 aa30.65■■■□□ 2.5
PGAP3-208ENST00000582276 CUL7Q14999 1698 aa30.59■■■□□ 2.49
PGAP3-208ENST00000582276 CARMIL1Q5VZK9 1371 aa30.55■■■□□ 2.48
PGAP3-208ENST00000582276 CLASP1Q7Z460 1538 aa30.52■■■□□ 2.48
PGAP3-208ENST00000582276 CEP170Q5SW79 1584 aa30.49■■■□□ 2.47
PGAP3-208ENST00000582276 NUP160Q12769 1436 aa30.48■■■□□ 2.47
PGAP3-208ENST00000582276 ARHGEF11O15085 1522 aa30.41■■■□□ 2.46
PGAP3-208ENST00000582276 RIMBP3CA6NJZ7 1639 aa30.4■■■□□ 2.46
PGAP3-208ENST00000582276 RIMBP3BA6NNM3 1639 aa30.4■■■□□ 2.46
PGAP3-208ENST00000582276 RIMBP3Q9UFD9 1639 aa30.4■■■□□ 2.46
PGAP3-208ENST00000582276 FAM9AQ8IZU1 332 aaPredicted RBP30.38■■■□□ 2.45
PGAP3-208ENST00000582276 RAPGEF2Q9Y4G8 1499 aa30.38■■■□□ 2.45
PGAP3-208ENST00000582276 CSRNP3Q8WYN3 585 aa30.36■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms