RNA–Protein interactions for RNA: ENST00000580898.5

PGAP3-207, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-207ENST00000580898 ZFYVE16Q7Z3T8 1539 aa22.14■■□□□ 1.13
PGAP3-207ENST00000580898 SCAPERQ9BY12 1400 aa22.14■■□□□ 1.13
PGAP3-207ENST00000580898 CCDC18Q5T9S5 1454 aa22.13■■□□□ 1.13
PGAP3-207ENST00000580898 CASKIN1Q8WXD9 1431 aa22.1■■□□□ 1.13
PGAP3-207ENST00000580898 MADDQ8WXG6 1647 aa22.09■■□□□ 1.13
PGAP3-207ENST00000580898 ARHGAP5Q13017 1502 aa22.08■■□□□ 1.13
PGAP3-207ENST00000580898 PCF11O94913 1555 aaKnown RBP22.07■■□□□ 1.12
PGAP3-207ENST00000580898 YEATS2Q9ULM3 1422 aa22.06■■□□□ 1.12
PGAP3-207ENST00000580898 ZNF518AQ6AHZ1 1483 aa22.05■■□□□ 1.12
PGAP3-207ENST00000580898 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
PGAP3-207ENST00000580898 LRRIQ1Q96JM4 1722 aa22.03■■□□□ 1.12
PGAP3-207ENST00000580898 RIMS1Q86UR5 1692 aaKnown RBP22.01■■□□□ 1.11
PGAP3-207ENST00000580898 C9orf84Q5VXU9 1444 aa22.01■■□□□ 1.11
PGAP3-207ENST00000580898 ATP10AO60312 1499 aa22.01■■□□□ 1.11
PGAP3-207ENST00000580898 MYT1LQ9UL68 1186 aa21.98■■□□□ 1.11
PGAP3-207ENST00000580898 PREX2Q70Z35 1606 aa21.97■■□□□ 1.11
PGAP3-207ENST00000580898 KDM5CP41229 1560 aa21.96■■□□□ 1.11
PGAP3-207ENST00000580898 MLECQ14165 292 aa21.96■■□□□ 1.11
PGAP3-207ENST00000580898 ILDR1Q86SU0 546 aaPredicted RBP21.94■■□□□ 1.1
PGAP3-207ENST00000580898 CDC42BPBQ9Y5S2 1711 aa21.94■■□□□ 1.1
PGAP3-207ENST00000580898 AFAP1Q8N556 730 aa21.93■■□□□ 1.1
PGAP3-207ENST00000580898 SIGLEC1Q9BZZ2 1709 aa21.92■■□□□ 1.1
PGAP3-207ENST00000580898 FER1L4A9Z1Z3 1794 aa21.92■■□□□ 1.1
PGAP3-207ENST00000580898 LMTK3Q96Q04 1460 aa21.91■■□□□ 1.1
PGAP3-207ENST00000580898 ABCC1P33527 1531 aa21.9■■□□□ 1.1
PGAP3-207ENST00000580898 PLPPR3Q6T4P5 718 aa21.9■■□□□ 1.1
PGAP3-207ENST00000580898 MLH3Q9UHC1 1453 aa21.9■■□□□ 1.1
PGAP3-207ENST00000580898 ARHGEF12Q9NZN5 1544 aa21.89■■□□□ 1.09
PGAP3-207ENST00000580898 REREQ9P2R6 1566 aa21.87■■□□□ 1.09
PGAP3-207ENST00000580898 ITSN2Q9NZM3 1697 aa21.86■■□□□ 1.09
PGAP3-207ENST00000580898 DIP2CQ9Y2E4 1556 aa21.86■■□□□ 1.09
PGAP3-207ENST00000580898 CDC42BPAQ5VT25 1732 aa21.86■■□□□ 1.09
PGAP3-207ENST00000580898 TRAPPC8Q9Y2L5 1435 aa21.84■■□□□ 1.09
PGAP3-207ENST00000580898 MTUS2Q5JR59 1369 aa21.84■■□□□ 1.09
PGAP3-207ENST00000580898 ZNF777Q9ULD5 760 aaPredicted RBP21.83■■□□□ 1.09
PGAP3-207ENST00000580898 ABCA6Q8N139 1617 aa21.81■■□□□ 1.08
PGAP3-207ENST00000580898 ESF1Q9H501 851 aaKnown RBP21.81■■□□□ 1.08
PGAP3-207ENST00000580898 CCNB3Q8WWL7 1395 aa21.81■■□□□ 1.08
PGAP3-207ENST00000580898 GPATCH8Q9UKJ3 1502 aaKnown RBP21.8■■□□□ 1.08
PGAP3-207ENST00000580898 PLEKHH2Q8IVE3 1493 aa21.8■■□□□ 1.08
PGAP3-207ENST00000580898 AGLP35573 1532 aa21.8■■□□□ 1.08
PGAP3-207ENST00000580898 CFDP1Q9UEE9 299 aaPredicted RBP21.79■■□□□ 1.08
PGAP3-207ENST00000580898 CEP162Q5TB80 1403 aa21.78■■□□□ 1.08
PGAP3-207ENST00000580898 SAMD9LQ8IVG5 1584 aa21.78■■□□□ 1.08
PGAP3-207ENST00000580898 SYCP2Q9BX26 1530 aa21.77■■□□□ 1.08
PGAP3-207ENST00000580898 HSPA2P54652 639 aa21.77■■□□□ 1.08
PGAP3-207ENST00000580898 KIAA1107Q9UPP5 1409 aa21.76■■□□□ 1.07
PGAP3-207ENST00000580898 EHBP1L1Q8N3D4 1523 aa21.75■■□□□ 1.07
PGAP3-207ENST00000580898 KIDINS220Q9ULH0 1771 aa21.75■■□□□ 1.07
PGAP3-207ENST00000580898 PREX1Q8TCU6 1659 aa21.75■■□□□ 1.07
PGAP3-207ENST00000580898 SPAG9O60271 1321 aaKnown RBP21.75■■□□□ 1.07
PGAP3-207ENST00000580898 FBXO41Q8TF61 875 aa21.73■■□□□ 1.07
PGAP3-207ENST00000580898 CEBPAP49715 358 aaPredicted RBP21.72■■□□□ 1.07
PGAP3-207ENST00000580898 HNRNPMP52272 730 aaKnown RBP eCLIP21.72■■□□□ 1.07
PGAP3-207ENST00000580898 UHRF1BP1Q6BDS2 1440 aa21.72■■□□□ 1.07
PGAP3-207ENST00000580898 CNTLNQ9NXG0 1405 aa21.72■■□□□ 1.07
PGAP3-207ENST00000580898 ATP7AQ04656 1500 aa21.69■■□□□ 1.06
PGAP3-207ENST00000580898 TIAM1Q13009 1591 aa21.67■■□□□ 1.06
PGAP3-207ENST00000580898 INO80Q9ULG1 1556 aaPredicted RBP21.65■■□□□ 1.06
PGAP3-207ENST00000580898 C3P01024 1663 aa21.64■■□□□ 1.05
PGAP3-207ENST00000580898 DMRT2Q9Y5R5 561 aa21.64■■□□□ 1.05
PGAP3-207ENST00000580898 A2MP01023 1474 aa21.63■■□□□ 1.05
PGAP3-207ENST00000580898 SETD1BQ9UPS6 1966 aaKnown RBP21.61■■□□□ 1.05
PGAP3-207ENST00000580898 SUPT6HQ7KZ85 1726 aaKnown RBP21.6■■□□□ 1.05
PGAP3-207ENST00000580898 MROH2AA6NES4 1674 aa21.6■■□□□ 1.05
PGAP3-207ENST00000580898 PLXNC1O60486 1568 aa21.6■■□□□ 1.05
PGAP3-207ENST00000580898 RTEL1-TNFRSF6BF6WH68 1400 aa21.58■■□□□ 1.05
PGAP3-207ENST00000580898 ADGBQ8N7X0 1667 aa21.58■■□□□ 1.05
PGAP3-207ENST00000580898 NCOA2Q15596 1464 aa21.58■■□□□ 1.04
PGAP3-207ENST00000580898 ZNF644Q9H582 1327 aaPredicted RBP21.57■■□□□ 1.04
PGAP3-207ENST00000580898 NPATQ14207 1427 aa21.57■■□□□ 1.04
PGAP3-207ENST00000580898 MBD5Q9P267 1494 aa21.57■■□□□ 1.04
PGAP3-207ENST00000580898 VPS8Q8N3P4 1428 aa21.56■■□□□ 1.04
PGAP3-207ENST00000580898 RSPH4AQ5TD94 716 aa21.56■■□□□ 1.04
PGAP3-207ENST00000580898 PPP6R1Q9UPN7 881 aa21.56■■□□□ 1.04
PGAP3-207ENST00000580898 ZMYM3Q14202 1370 aa21.56■■□□□ 1.04
PGAP3-207ENST00000580898 GGT6Q6P531 493 aa21.54■■□□□ 1.04
PGAP3-207ENST00000580898 CCDC141Q6ZP82 1450 aa21.53■■□□□ 1.04
PGAP3-207ENST00000580898 CERKQ8TCT0 537 aa21.53■■□□□ 1.04
PGAP3-207ENST00000580898 CAMSAP2Q08AD1 1489 aa21.52■■□□□ 1.04
PGAP3-207ENST00000580898 CLTCQ00610 1675 aaKnown RBP21.5■■□□□ 1.03
PGAP3-207ENST00000580898 LOC105371045A0A1W2PR82 267 aa21.5■■□□□ 1.03
PGAP3-207ENST00000580898 DHX29Q7Z478 1369 aaKnown RBP21.49■■□□□ 1.03
PGAP3-207ENST00000580898 STRCQ7RTU9 1775 aa21.49■■□□□ 1.03
PGAP3-207ENST00000580898 PTPRTO14522 1441 aa21.49■■□□□ 1.03
PGAP3-207ENST00000580898 LRRC9Q6ZRR7 1453 aa21.49■■□□□ 1.03
PGAP3-207ENST00000580898 MAP3K1Q13233 1512 aa21.47■■□□□ 1.03
PGAP3-207ENST00000580898 TSPY4P0CV99 314 aa21.46■■□□□ 1.03
PGAP3-207ENST00000580898 TSPY10P0CW01 314 aa21.46■■□□□ 1.03
PGAP3-207ENST00000580898 ARHGEF5Q12774 1597 aa21.45■■□□□ 1.02
PGAP3-207ENST00000580898 NCOA1Q15788 1441 aa21.45■■□□□ 1.02
PGAP3-207ENST00000580898 FAM135AQ9P2D6 1515 aa21.44■■□□□ 1.02
PGAP3-207ENST00000580898 PTPRKQ15262 1439 aa21.43■■□□□ 1.02
PGAP3-207ENST00000580898 KIF3BO15066 747 aa21.42■■□□□ 1.02
PGAP3-207ENST00000580898 CAMSAP1Q5T5Y3 1602 aa21.42■■□□□ 1.02
PGAP3-207ENST00000580898 MYO3AQ8NEV4 1616 aa21.41■■□□□ 1.02
PGAP3-207ENST00000580898 ZNF142P52746 1687 aaPredicted RBP21.4■■□□□ 1.02
PGAP3-207ENST00000580898 APLP2Q06481 763 aa21.4■■□□□ 1.02
PGAP3-207ENST00000580898 CEP170BQ9Y4F5 1589 aaPredicted RBP21.39■■□□□ 1.01
PGAP3-207ENST00000580898 KDM5DQ9BY66 1539 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms