RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 CASKIN1Q8WXD9 1431 aa27.68■■■□□ 2.02
EIF4A1-216ENST00000580888 ATP1B4Q9UN42 357 aaPredicted RBP27.68■■■□□ 2.02
EIF4A1-216ENST00000580888 CCDC18Q5T9S5 1454 aa27.65■■■□□ 2.02
EIF4A1-216ENST00000580888 HECW2Q9P2P5 1572 aa27.64■■■□□ 2.01
EIF4A1-216ENST00000580888 MAGI2Q86UL8 1455 aa27.64■■■□□ 2.01
EIF4A1-216ENST00000580888 POGZQ7Z3K3 1410 aa27.61■■■□□ 2.01
EIF4A1-216ENST00000580888 FYCO1Q9BQS8 1478 aa27.6■■■□□ 2.01
EIF4A1-216ENST00000580888 ZFYVE16Q7Z3T8 1539 aa27.6■■■□□ 2.01
EIF4A1-216ENST00000580888 SCAPERQ9BY12 1400 aa27.59■■■□□ 2.01
EIF4A1-216ENST00000580888 EFCAB2Q5VUJ9 269 aa27.58■■■□□ 2.01
EIF4A1-216ENST00000580888 CDC42BPBQ9Y5S2 1711 aa27.58■■■□□ 2.01
EIF4A1-216ENST00000580888 PTPRMP28827 1452 aa27.57■■■□□ 2
EIF4A1-216ENST00000580888 MADDQ8WXG6 1647 aa27.56■■■□□ 2
EIF4A1-216ENST00000580888 SIGLEC1Q9BZZ2 1709 aa27.55■■■□□ 2
EIF4A1-216ENST00000580888 PREX2Q70Z35 1606 aa27.54■■■□□ 2
EIF4A1-216ENST00000580888 YEATS2Q9ULM3 1422 aa27.54■■■□□ 2
EIF4A1-216ENST00000580888 ARHGAP5Q13017 1502 aa27.53■■■□□ 2
EIF4A1-216ENST00000580888 ARID4BQ4LE39 1312 aaPredicted RBP27.5■■□□□ 1.99
EIF4A1-216ENST00000580888 PPARGC1BQ86YN6 1023 aaKnown RBP27.5■■□□□ 1.99
EIF4A1-216ENST00000580888 KDM5CP41229 1560 aa27.49■■□□□ 1.99
EIF4A1-216ENST00000580888 CDC42BPAQ5VT25 1732 aa27.48■■□□□ 1.99
EIF4A1-216ENST00000580888 ZNF518AQ6AHZ1 1483 aa27.48■■□□□ 1.99
EIF4A1-216ENST00000580888 RIMS1Q86UR5 1692 aaKnown RBP27.47■■□□□ 1.99
EIF4A1-216ENST00000580888 MAP3K1Q13233 1512 aa27.44■■□□□ 1.98
EIF4A1-216ENST00000580888 ATP10AO60312 1499 aa27.44■■□□□ 1.98
EIF4A1-216ENST00000580888 ABCC1P33527 1531 aa27.42■■□□□ 1.98
EIF4A1-216ENST00000580888 ITSN2Q9NZM3 1697 aa27.42■■□□□ 1.98
EIF4A1-216ENST00000580888 C9orf84Q5VXU9 1444 aa27.41■■□□□ 1.98
EIF4A1-216ENST00000580888 APLP2Q06481 763 aa27.39■■□□□ 1.98
EIF4A1-216ENST00000580888 FER1L4A9Z1Z3 1794 aa27.39■■□□□ 1.98
EIF4A1-216ENST00000580888 REREQ9P2R6 1566 aa27.37■■□□□ 1.97
EIF4A1-216ENST00000580888 MLH3Q9UHC1 1453 aa27.37■■□□□ 1.97
EIF4A1-216ENST00000580888 ARHGEF12Q9NZN5 1544 aa27.36■■□□□ 1.97
EIF4A1-216ENST00000580888 DIP2CQ9Y2E4 1556 aa27.35■■□□□ 1.97
EIF4A1-216ENST00000580888 AFAP1Q8N556 730 aa27.34■■□□□ 1.97
EIF4A1-216ENST00000580888 ABCA6Q8N139 1617 aa27.32■■□□□ 1.96
EIF4A1-216ENST00000580888 GPATCH8Q9UKJ3 1502 aaKnown RBP27.31■■□□□ 1.96
EIF4A1-216ENST00000580888 TRAPPC8Q9Y2L5 1435 aa27.31■■□□□ 1.96
EIF4A1-216ENST00000580888 SAMD9LQ8IVG5 1584 aa27.3■■□□□ 1.96
EIF4A1-216ENST00000580888 LMTK3Q96Q04 1460 aa27.29■■□□□ 1.96
EIF4A1-216ENST00000580888 KIDINS220Q9ULH0 1771 aa27.29■■□□□ 1.96
EIF4A1-216ENST00000580888 TIAM1Q13009 1591 aa27.27■■□□□ 1.96
EIF4A1-216ENST00000580888 AGLP35573 1532 aa27.25■■□□□ 1.95
EIF4A1-216ENST00000580888 EHBP1L1Q8N3D4 1523 aa27.24■■□□□ 1.95
EIF4A1-216ENST00000580888 HRCP23327 699 aa27.23■■□□□ 1.95
EIF4A1-216ENST00000580888 MLECQ14165 292 aa27.23■■□□□ 1.95
EIF4A1-216ENST00000580888 KANK4Q5T7N3 995 aaPredicted RBP27.23■■□□□ 1.95
EIF4A1-216ENST00000580888 MTUS2Q5JR59 1369 aa27.22■■□□□ 1.95
EIF4A1-216ENST00000580888 SYCP2Q9BX26 1530 aa27.21■■□□□ 1.95
EIF4A1-216ENST00000580888 KIAA1107Q9UPP5 1409 aa27.21■■□□□ 1.95
EIF4A1-216ENST00000580888 PLEKHH2Q8IVE3 1493 aa27.2■■□□□ 1.95
EIF4A1-216ENST00000580888 CCNB3Q8WWL7 1395 aa27.19■■□□□ 1.94
EIF4A1-216ENST00000580888 MYT1LQ9UL68 1186 aa27.17■■□□□ 1.94
EIF4A1-216ENST00000580888 LRRC9Q6ZRR7 1453 aa27.15■■□□□ 1.94
EIF4A1-216ENST00000580888 SETD1BQ9UPS6 1966 aaKnown RBP27.15■■□□□ 1.94
EIF4A1-216ENST00000580888 PREX1Q8TCU6 1659 aa27.14■■□□□ 1.94
EIF4A1-216ENST00000580888 CFDP1Q9UEE9 299 aaPredicted RBP27.14■■□□□ 1.94
EIF4A1-216ENST00000580888 ZNF777Q9ULD5 760 aaPredicted RBP27.14■■□□□ 1.94
EIF4A1-216ENST00000580888 INO80Q9ULG1 1556 aaPredicted RBP27.14■■□□□ 1.93
EIF4A1-216ENST00000580888 ATP7AQ04656 1500 aa27.11■■□□□ 1.93
EIF4A1-216ENST00000580888 ILDR1Q86SU0 546 aaPredicted RBP27.1■■□□□ 1.93
EIF4A1-216ENST00000580888 SUPT6HQ7KZ85 1726 aaKnown RBP27.1■■□□□ 1.93
EIF4A1-216ENST00000580888 C3P01024 1663 aa27.09■■□□□ 1.93
EIF4A1-216ENST00000580888 HNRNPMP52272 730 aaKnown RBP eCLIP27.09■■□□□ 1.937e-11■■■■□ 19.9
EIF4A1-216ENST00000580888 SPAG9O60271 1321 aaKnown RBP27.09■■□□□ 1.93
EIF4A1-216ENST00000580888 RRBP1Q9P2E9 1410 aaKnown RBP27.08■■□□□ 1.93
EIF4A1-216ENST00000580888 PLXNC1O60486 1568 aa27.07■■□□□ 1.92
EIF4A1-216ENST00000580888 PLPPR3Q6T4P5 718 aa27.06■■□□□ 1.92
EIF4A1-216ENST00000580888 MBD5Q9P267 1494 aa27.04■■□□□ 1.92
EIF4A1-216ENST00000580888 MROH2AA6NES4 1674 aa27.04■■□□□ 1.92
EIF4A1-216ENST00000580888 ADGBQ8N7X0 1667 aa27.04■■□□□ 1.92
EIF4A1-216ENST00000580888 NCOA2Q15596 1464 aa27.03■■□□□ 1.92
EIF4A1-216ENST00000580888 CNTLNQ9NXG0 1405 aa27.02■■□□□ 1.92
EIF4A1-216ENST00000580888 CEBPAP49715 358 aaPredicted RBP27.02■■□□□ 1.92
EIF4A1-216ENST00000580888 HSPA2P54652 639 aa27.01■■□□□ 1.91
EIF4A1-216ENST00000580888 A2MP01023 1474 aa27■■□□□ 1.91
EIF4A1-216ENST00000580888 ZNF644Q9H582 1327 aaPredicted RBP26.98■■□□□ 1.91
EIF4A1-216ENST00000580888 RTEL1-TNFRSF6BF6WH68 1400 aa26.97■■□□□ 1.91
EIF4A1-216ENST00000580888 UHRF1BP1Q6BDS2 1440 aa26.95■■□□□ 1.9
EIF4A1-216ENST00000580888 ESF1Q9H501 851 aaKnown RBP26.94■■□□□ 1.9
EIF4A1-216ENST00000580888 CAMSAP2Q08AD1 1489 aa26.93■■□□□ 1.9
EIF4A1-216ENST00000580888 STRCQ7RTU9 1775 aa26.92■■□□□ 1.9
EIF4A1-216ENST00000580888 CCDC141Q6ZP82 1450 aa26.91■■□□□ 1.9
EIF4A1-216ENST00000580888 ARHGEF5Q12774 1597 aa26.91■■□□□ 1.9
EIF4A1-216ENST00000580888 CLTCQ00610 1675 aaKnown RBP26.9■■□□□ 1.9
EIF4A1-216ENST00000580888 RSPH4AQ5TD94 716 aa26.88■■□□□ 1.89
EIF4A1-216ENST00000580888 NPATQ14207 1427 aa26.88■■□□□ 1.89
EIF4A1-216ENST00000580888 ZEB1P37275 1124 aaPredicted RBP26.86■■□□□ 1.89
EIF4A1-216ENST00000580888 ZMYM3Q14202 1370 aa26.84■■□□□ 1.89
EIF4A1-216ENST00000580888 FBXO41Q8TF61 875 aa26.84■■□□□ 1.89
EIF4A1-216ENST00000580888 PPP6R1Q9UPN7 881 aa26.84■■□□□ 1.89
EIF4A1-216ENST00000580888 DHX29Q7Z478 1369 aaKnown RBP26.84■■□□□ 1.89
EIF4A1-216ENST00000580888 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP26.82■■□□□ 1.886e-7■■□□□ 14.4
EIF4A1-216ENST00000580888 FAM135AQ9P2D6 1515 aa26.79■■□□□ 1.88
EIF4A1-216ENST00000580888 MAST1Q9Y2H9 1570 aa26.79■■□□□ 1.88
EIF4A1-216ENST00000580888 ZNF142P52746 1687 aaPredicted RBP26.79■■□□□ 1.88
EIF4A1-216ENST00000580888 MIA2Q96PC5 1412 aa26.77■■□□□ 1.88
EIF4A1-216ENST00000580888 DMRT2Q9Y5R5 561 aa26.77■■□□□ 1.88
EIF4A1-216ENST00000580888 PTPRKQ15262 1439 aa26.76■■□□□ 1.87
EIF4A1-216ENST00000580888 GGT6Q6P531 493 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms