RNA–Protein interactions for RNA: ENST00000579780.5

CDK5RAP3-215, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 611 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-215ENST00000579780 TRIM26Q12899 539 aaPredicted RBP25.62■■□□□ 1.69
CDK5RAP3-215ENST00000579780 PLCH2O75038 1416 aa25.61■■□□□ 1.69
CDK5RAP3-215ENST00000579780 ARHGAP5Q13017 1502 aa25.6■■□□□ 1.69
CDK5RAP3-215ENST00000579780 KIF13AQ9H1H9 1805 aa25.6■■□□□ 1.69
CDK5RAP3-215ENST00000579780 CFAP74Q9C0B2 1584 aa25.58■■□□□ 1.69
CDK5RAP3-215ENST00000579780 CAMSAP2Q08AD1 1489 aa25.58■■□□□ 1.69
CDK5RAP3-215ENST00000579780 SAMD9LQ8IVG5 1584 aa25.56■■□□□ 1.68
CDK5RAP3-215ENST00000579780 CFDP1Q9UEE9 299 aaPredicted RBP25.54■■□□□ 1.68
CDK5RAP3-215ENST00000579780 CD109Q6YHK3 1445 aa25.53■■□□□ 1.68
CDK5RAP3-215ENST00000579780 PLEKHH2Q8IVE3 1493 aa25.51■■□□□ 1.67
CDK5RAP3-215ENST00000579780 ABCC1P33527 1531 aa25.51■■□□□ 1.67
CDK5RAP3-215ENST00000579780 DNMT1P26358 1616 aaKnown RBP25.51■■□□□ 1.67
CDK5RAP3-215ENST00000579780 FANCAO15360 1455 aa25.49■■□□□ 1.67
CDK5RAP3-215ENST00000579780 ARHGEF5Q12774 1597 aa25.48■■□□□ 1.67
CDK5RAP3-215ENST00000579780 CROCC2H7BZ55 1655 aa25.48■■□□□ 1.67
CDK5RAP3-215ENST00000579780 PPRC1Q5VV67 1664 aaKnown RBP25.48■■□□□ 1.67
CDK5RAP3-215ENST00000579780 KIAA1107Q9UPP5 1409 aa25.46■■□□□ 1.67
CDK5RAP3-215ENST00000579780 SYCP2Q9BX26 1530 aa25.45■■□□□ 1.66
CDK5RAP3-215ENST00000579780 NEO1Q92859 1461 aa25.45■■□□□ 1.66
CDK5RAP3-215ENST00000579780 FAM69CQ0P6D2 419 aa25.44■■□□□ 1.66
CDK5RAP3-215ENST00000579780 FAM50AQ14320 339 aaKnown RBP25.44■■□□□ 1.66
CDK5RAP3-215ENST00000579780 EFCAB2Q5VUJ9 269 aa25.44■■□□□ 1.66
CDK5RAP3-215ENST00000579780 TEX14Q8IWB6 1497 aa25.42■■□□□ 1.66
CDK5RAP3-215ENST00000579780 MBD5Q9P267 1494 aa25.4■■□□□ 1.66
CDK5RAP3-215ENST00000579780 SHANK2Q9UPX8 1470 aa25.4■■□□□ 1.66
CDK5RAP3-215ENST00000579780 DAPK1P53355 1430 aa25.4■■□□□ 1.66
CDK5RAP3-215ENST00000579780 CCDC141Q6ZP82 1450 aa25.4■■□□□ 1.66
CDK5RAP3-215ENST00000579780 ZNF644Q9H582 1327 aaPredicted RBP25.39■■□□□ 1.66
CDK5RAP3-215ENST00000579780 ADGRL1O94910 1474 aa25.39■■□□□ 1.65
CDK5RAP3-215ENST00000579780 TSPOAP1O95153 1857 aa25.38■■□□□ 1.65
CDK5RAP3-215ENST00000579780 ZNF777Q9ULD5 760 aaPredicted RBP25.38■■□□□ 1.65
CDK5RAP3-215ENST00000579780 AKNAQ7Z591 1439 aa25.37■■□□□ 1.65
CDK5RAP3-215ENST00000579780 ADGBQ8N7X0 1667 aa25.37■■□□□ 1.65
CDK5RAP3-215ENST00000579780 ABCC5O15440 1437 aa25.37■■□□□ 1.65
CDK5RAP3-215ENST00000579780 PCGF6Q9BYE7 350 aa25.36■■□□□ 1.65
CDK5RAP3-215ENST00000579780 ARHGEF12Q9NZN5 1544 aa25.36■■□□□ 1.65
CDK5RAP3-215ENST00000579780 MAST1Q9Y2H9 1570 aa25.35■■□□□ 1.65
CDK5RAP3-215ENST00000579780 PTPRKQ15262 1439 aa25.31■■□□□ 1.64
CDK5RAP3-215ENST00000579780 ADGRL2O95490 1459 aa25.3■■□□□ 1.64
CDK5RAP3-215ENST00000579780 RSPH4AQ5TD94 716 aa25.29■■□□□ 1.64
CDK5RAP3-215ENST00000579780 POGZQ7Z3K3 1410 aa25.29■■□□□ 1.64
CDK5RAP3-215ENST00000579780 KDM5CP41229 1560 aa25.28■■□□□ 1.64
CDK5RAP3-215ENST00000579780 GCC2Q8IWJ2 1684 aa25.28■■□□□ 1.64
CDK5RAP3-215ENST00000579780 SCAPERQ9BY12 1400 aa25.28■■□□□ 1.64
CDK5RAP3-215ENST00000579780 ZNF518AQ6AHZ1 1483 aa25.28■■□□□ 1.64
CDK5RAP3-215ENST00000579780 C9orf84Q5VXU9 1444 aa25.27■■□□□ 1.64
CDK5RAP3-215ENST00000579780 TRAPPC8Q9Y2L5 1435 aa25.27■■□□□ 1.64
CDK5RAP3-215ENST00000579780 RICTORQ6R327 1708 aa25.26■■□□□ 1.63
CDK5RAP3-215ENST00000579780 ROCK1Q13464 1354 aa25.26■■□□□ 1.63
CDK5RAP3-215ENST00000579780 PLXNC1O60486 1568 aa25.26■■□□□ 1.63
CDK5RAP3-215ENST00000579780 INO80Q9ULG1 1556 aaPredicted RBP25.26■■□□□ 1.63
CDK5RAP3-215ENST00000579780 ZFYVE16Q7Z3T8 1539 aa25.25■■□□□ 1.63
CDK5RAP3-215ENST00000579780 DENND4BO75064 1496 aaPredicted RBP25.24■■□□□ 1.63
CDK5RAP3-215ENST00000579780 ITGAEP38570 1179 aa25.24■■□□□ 1.63
CDK5RAP3-215ENST00000579780 HNRNPMP52272 730 aaKnown RBP eCLIP25.24■■□□□ 1.63
CDK5RAP3-215ENST00000579780 FRMPD1Q5SYB0 1578 aa25.22■■□□□ 1.63
CDK5RAP3-215ENST00000579780 HFM1A2PYH4 1435 aa25.21■■□□□ 1.63
CDK5RAP3-215ENST00000579780 HECW2Q9P2P5 1572 aa25.2■■□□□ 1.62
CDK5RAP3-215ENST00000579780 ZMYM4Q5VZL5 1548 aa25.2■■□□□ 1.62
CDK5RAP3-215ENST00000579780 ATP7AQ04656 1500 aa25.19■■□□□ 1.62
CDK5RAP3-215ENST00000579780 RTEL1-TNFRSF6BF6WH68 1400 aa25.19■■□□□ 1.62
CDK5RAP3-215ENST00000579780 ANKRD30AQ9BXX3 1397 aa25.17■■□□□ 1.62
CDK5RAP3-215ENST00000579780 TSPY4P0CV99 314 aa25.16■■□□□ 1.62
CDK5RAP3-215ENST00000579780 TSPY10P0CW01 314 aa25.16■■□□□ 1.62
CDK5RAP3-215ENST00000579780 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
CDK5RAP3-215ENST00000579780 NCOA1Q15788 1441 aa25.16■■□□□ 1.62
CDK5RAP3-215ENST00000579780 NAIPQ13075 1403 aa25.15■■□□□ 1.62
CDK5RAP3-215ENST00000579780 KIDINS220Q9ULH0 1771 aa25.15■■□□□ 1.62
CDK5RAP3-215ENST00000579780 MLH3Q9UHC1 1453 aa25.15■■□□□ 1.62
CDK5RAP3-215ENST00000579780 SETD5Q9C0A6 1442 aa25.12■■□□□ 1.61
CDK5RAP3-215ENST00000579780 SPAG9O60271 1321 aaKnown RBP25.12■■□□□ 1.61
CDK5RAP3-215ENST00000579780 CHIC2Q9UKJ5 165 aa25.11■■□□□ 1.61
CDK5RAP3-215ENST00000579780 KIF15Q9NS87 1388 aa25.09■■□□□ 1.61
CDK5RAP3-215ENST00000579780 AFAP1Q8N556 730 aa25.09■■□□□ 1.61
CDK5RAP3-215ENST00000579780 DUOX2Q9NRD8 1548 aa25.08■■□□□ 1.61
CDK5RAP3-215ENST00000579780 ABCA6Q8N139 1617 aa25.08■■□□□ 1.6
CDK5RAP3-215ENST00000579780 KDM6BO15054 1643 aa25.07■■□□□ 1.6
CDK5RAP3-215ENST00000579780 MAGI2Q86UL8 1455 aa25.07■■□□□ 1.6
CDK5RAP3-215ENST00000579780 COL17A1Q9UMD9 1497 aaPredicted RBP25.06■■□□□ 1.6
CDK5RAP3-215ENST00000579780 DIP2CQ9Y2E4 1556 aa25.05■■□□□ 1.6
CDK5RAP3-215ENST00000579780 RAB3GAP2Q9H2M9 1393 aa25.05■■□□□ 1.6
CDK5RAP3-215ENST00000579780 RRP7BPQ9NSQ0 103 aa25.04■■□□□ 1.6
CDK5RAP3-215ENST00000579780 ARHGEF40Q8TER5 1519 aa25.03■■□□□ 1.6
CDK5RAP3-215ENST00000579780 ERBINQ96RT1 1412 aa25.03■■□□□ 1.6
CDK5RAP3-215ENST00000579780 EIF2AK4Q9P2K8 1649 aaKnown RBP25.02■■□□□ 1.6
CDK5RAP3-215ENST00000579780 RAPGEF3O95398 923 aa25.02■■□□□ 1.6
CDK5RAP3-215ENST00000579780 ANKRD50Q9ULJ7 1429 aa25.02■■□□□ 1.6
CDK5RAP3-215ENST00000579780 REREQ9P2R6 1566 aa24.98■■□□□ 1.59
CDK5RAP3-215ENST00000579780 HRCP23327 699 aa24.98■■□□□ 1.59
CDK5RAP3-215ENST00000579780 BCORL1Q5H9F3 1711 aa24.97■■□□□ 1.59
CDK5RAP3-215ENST00000579780 UNC13BO14795 1591 aa24.96■■□□□ 1.59
CDK5RAP3-215ENST00000579780 A2MP01023 1474 aa24.96■■□□□ 1.59
CDK5RAP3-215ENST00000579780 YEATS2Q9ULM3 1422 aa24.95■■□□□ 1.58
CDK5RAP3-215ENST00000579780 ACIN1Q9UKV3 1341 aaKnown RBP24.94■■□□□ 1.58
CDK5RAP3-215ENST00000579780 DEPDC5O75140 1603 aa24.93■■□□□ 1.58
CDK5RAP3-215ENST00000579780 DHX29Q7Z478 1369 aaKnown RBP24.92■■□□□ 1.58
CDK5RAP3-215ENST00000579780 KDM5DQ9BY66 1539 aa24.91■■□□□ 1.58
CDK5RAP3-215ENST00000579780 MYT1LQ9UL68 1186 aa24.91■■□□□ 1.58
CDK5RAP3-215ENST00000579780 RNF17Q9BXT8 1623 aaKnown RBP24.9■■□□□ 1.58
CDK5RAP3-215ENST00000579780 ATP10AO60312 1499 aa24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms