RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 PTPRTO14522 1441 aa19.59■□□□□ 0.73
GGA3-206ENST00000578773 MED1Q15648 1581 aaPredicted RBP19.58■□□□□ 0.73
GGA3-206ENST00000578773 UHRF1BP1Q6BDS2 1440 aa19.57■□□□□ 0.72
GGA3-206ENST00000578773 NUP153P49790 1475 aaKnown RBP19.56■□□□□ 0.72
GGA3-206ENST00000578773 IQSEC2Q5JU85 1478 aa19.56■□□□□ 0.72
GGA3-206ENST00000578773 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
GGA3-206ENST00000578773 SAMD9Q5K651 1589 aa19.56■□□□□ 0.72
GGA3-206ENST00000578773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.52■□□□□ 0.72
GGA3-206ENST00000578773 HNRNPUL2Q1KMD3 747 aaKnown RBP19.52■□□□□ 0.72
GGA3-206ENST00000578773 MAGI2Q86UL8 1455 aa19.52■□□□□ 0.72
GGA3-206ENST00000578773 C9orf84Q5VXU9 1444 aa19.49■□□□□ 0.71
GGA3-206ENST00000578773 ATP10AO60312 1499 aa19.48■□□□□ 0.71
GGA3-206ENST00000578773 NCOA1Q15788 1441 aa19.47■□□□□ 0.71
GGA3-206ENST00000578773 PRXQ9BXM0 1461 aa19.46■□□□□ 0.71
GGA3-206ENST00000578773 UBAP1LF5GYI3 381 aa19.45■□□□□ 0.7
GGA3-206ENST00000578773 SCAPERQ9BY12 1400 aa19.44■□□□□ 0.7
GGA3-206ENST00000578773 ZNF335Q9H4Z2 1342 aaPredicted RBP19.43■□□□□ 0.7
GGA3-206ENST00000578773 CAMSAP1Q5T5Y3 1602 aa19.43■□□□□ 0.7
GGA3-206ENST00000578773 DIP2CQ9Y2E4 1556 aa19.41■□□□□ 0.7
GGA3-206ENST00000578773 ABCA6Q8N139 1617 aa19.4■□□□□ 0.7
GGA3-206ENST00000578773 MYO5CQ9NQX4 1742 aa19.39■□□□□ 0.69
GGA3-206ENST00000578773 SUPT6HQ7KZ85 1726 aaKnown RBP19.38■□□□□ 0.69
GGA3-206ENST00000578773 CDK13Q14004 1512 aaKnown RBP19.36■□□□□ 0.69
GGA3-206ENST00000578773 HSPA1LP34931 641 aa19.36■□□□□ 0.69
GGA3-206ENST00000578773 NCKAP5LQ9HCH0 1330 aa19.34■□□□□ 0.69
GGA3-206ENST00000578773 KDM5CP41229 1560 aa19.34■□□□□ 0.69
GGA3-206ENST00000578773 PLEKHD1A6NEE1 506 aa19.33■□□□□ 0.68
GGA3-206ENST00000578773 PLCH2O75038 1416 aa19.32■□□□□ 0.68
GGA3-206ENST00000578773 TRAPPC8Q9Y2L5 1435 aa19.31■□□□□ 0.68
GGA3-206ENST00000578773 KIF14Q15058 1648 aa19.3■□□□□ 0.68
GGA3-206ENST00000578773 REREQ9P2R6 1566 aa19.3■□□□□ 0.68
GGA3-206ENST00000578773 FAM9AQ8IZU1 332 aaPredicted RBP19.29■□□□□ 0.68
GGA3-206ENST00000578773 ZNF142P52746 1687 aaPredicted RBP19.29■□□□□ 0.68
GGA3-206ENST00000578773 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
GGA3-206ENST00000578773 MYO3AQ8NEV4 1616 aa19.28■□□□□ 0.68
GGA3-206ENST00000578773 SCAF1Q9H7N4 1312 aaKnown RBP19.27■□□□□ 0.68
GGA3-206ENST00000578773 ALKQ9UM73 1620 aa19.26■□□□□ 0.67
GGA3-206ENST00000578773 PIP4K2BP78356 416 aa19.26■□□□□ 0.67
GGA3-206ENST00000578773 MROH2AA6NES4 1674 aa19.25■□□□□ 0.67
GGA3-206ENST00000578773 ZNF518AQ6AHZ1 1483 aa19.25■□□□□ 0.67
GGA3-206ENST00000578773 AFAP1Q8N556 730 aa19.25■□□□□ 0.67
GGA3-206ENST00000578773 CDC42BPBQ9Y5S2 1711 aa19.22■□□□□ 0.67
GGA3-206ENST00000578773 KIDINS220Q9ULH0 1771 aa19.22■□□□□ 0.67
GGA3-206ENST00000578773 AGLP35573 1532 aa19.22■□□□□ 0.67
GGA3-206ENST00000578773 CLTCQ00610 1675 aaKnown RBP19.21■□□□□ 0.67
GGA3-206ENST00000578773 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
GGA3-206ENST00000578773 TCOF1Q13428 1488 aaKnown RBP19.2■□□□□ 0.66
GGA3-206ENST00000578773 ITSN2Q9NZM3 1697 aa19.19■□□□□ 0.66
GGA3-206ENST00000578773 CEP170BQ9Y4F5 1589 aaPredicted RBP19.19■□□□□ 0.66
GGA3-206ENST00000578773 ARHGAP5Q13017 1502 aa19.18■□□□□ 0.66
GGA3-206ENST00000578773 POLR1AO95602 1720 aaPredicted RBP19.17■□□□□ 0.66
GGA3-206ENST00000578773 LRRIQ1Q96JM4 1722 aa19.17■□□□□ 0.66
GGA3-206ENST00000578773 SENP3Q9H4L4 574 aaPredicted RBP19.16■□□□□ 0.66
GGA3-206ENST00000578773 MYT1LQ9UL68 1186 aa19.16■□□□□ 0.66
GGA3-206ENST00000578773 PLA2R1Q13018 1463 aa19.16■□□□□ 0.66
GGA3-206ENST00000578773 EFCAB2Q5VUJ9 269 aa19.15■□□□□ 0.66
GGA3-206ENST00000578773 NPATQ14207 1427 aa19.15■□□□□ 0.66
GGA3-206ENST00000578773 SETD1AO15047 1707 aaKnown RBP19.14■□□□□ 0.66
GGA3-206ENST00000578773 MLH3Q9UHC1 1453 aa19.14■□□□□ 0.65
GGA3-206ENST00000578773 NEURL4Q96JN8 1562 aa19.14■□□□□ 0.65
GGA3-206ENST00000578773 CNTLNQ9NXG0 1405 aa19.12■□□□□ 0.65
GGA3-206ENST00000578773 ESF1Q9H501 851 aaKnown RBP19.12■□□□□ 0.65
GGA3-206ENST00000578773 RGS17Q9UGC6 210 aaPredicted RBP19.12■□□□□ 0.65
GGA3-206ENST00000578773 ABCC1P33527 1531 aa19.1■□□□□ 0.65
GGA3-206ENST00000578773 STRCP1A6NGW2 1772 aa19.09■□□□□ 0.65
GGA3-206ENST00000578773 PPP6R1Q9UPN7 881 aa19.09■□□□□ 0.65
GGA3-206ENST00000578773 ZMYM3Q14202 1370 aa19.08■□□□□ 0.65
GGA3-206ENST00000578773 DNMT1P26358 1616 aaKnown RBP19.08■□□□□ 0.65
GGA3-206ENST00000578773 PREX2Q70Z35 1606 aa19.07■□□□□ 0.64
GGA3-206ENST00000578773 CPS1P31327 1500 aa19.07■□□□□ 0.64
GGA3-206ENST00000578773 PKD2Q13563 968 aa19.07■□□□□ 0.64
GGA3-206ENST00000578773 VWDEQ8N2E2 1590 aa19.06■□□□□ 0.64
GGA3-206ENST00000578773 PTPRKQ15262 1439 aa19.06■□□□□ 0.64
GGA3-206ENST00000578773 SHANK2Q9UPX8 1470 aa19.05■□□□□ 0.64
GGA3-206ENST00000578773 TOM1O60784 492 aa19.05■□□□□ 0.64
GGA3-206ENST00000578773 CDC42BPAQ5VT25 1732 aa19.03■□□□□ 0.64
GGA3-206ENST00000578773 SAMD9LQ8IVG5 1584 aa19.01■□□□□ 0.63
GGA3-206ENST00000578773 TROQ12816 1431 aaPredicted RBP18.98■□□□□ 0.63
GGA3-206ENST00000578773 PLXNC1O60486 1568 aa18.98■□□□□ 0.63
GGA3-206ENST00000578773 ATP1B4Q9UN42 357 aaPredicted RBP18.97■□□□□ 0.63
GGA3-206ENST00000578773 A2ML1A8K2U0 1454 aa18.97■□□□□ 0.63
GGA3-206ENST00000578773 POTEAQ6S8J7 498 aa18.96■□□□□ 0.63
GGA3-206ENST00000578773 CSRNP3Q8WYN3 585 aa18.96■□□□□ 0.63
GGA3-206ENST00000578773 RNF17Q9BXT8 1623 aaKnown RBP18.95■□□□□ 0.62
GGA3-206ENST00000578773 XIRP1Q702N8 1843 aaKnown RBP18.94■□□□□ 0.62
GGA3-206ENST00000578773 SYCP2Q9BX26 1530 aa18.91■□□□□ 0.62
GGA3-206ENST00000578773 INO80Q9ULG1 1556 aaPredicted RBP18.91■□□□□ 0.62
GGA3-206ENST00000578773 ATP7AQ04656 1500 aa18.9■□□□□ 0.62
GGA3-206ENST00000578773 LRRC7Q96NW7 1537 aa18.9■□□□□ 0.62
GGA3-206ENST00000578773 IQGAP1P46940 1657 aa18.89■□□□□ 0.61
GGA3-206ENST00000578773 CLIP1P30622 1438 aa18.87■□□□□ 0.61
GGA3-206ENST00000578773 SYNMO15061 1565 aa18.85■□□□□ 0.61
GGA3-206ENST00000578773 DEPDC5O75140 1603 aa18.85■□□□□ 0.61
GGA3-206ENST00000578773 A2MP01023 1474 aa18.84■□□□□ 0.61
GGA3-206ENST00000578773 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.84■□□□□ 0.61
GGA3-206ENST00000578773 GGT6Q6P531 493 aa18.84■□□□□ 0.61
GGA3-206ENST00000578773 ARHGAP35Q9NRY4 1499 aa18.83■□□□□ 0.6
GGA3-206ENST00000578773 ADGBQ8N7X0 1667 aa18.82■□□□□ 0.6
GGA3-206ENST00000578773 FBXO31Q5XUX0 539 aaPredicted RBP18.82■□□□□ 0.6
GGA3-206ENST00000578773 ZC3H13Q5T200 1668 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms