RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 ZFYVE16Q7Z3T8 1539 aa20.61■□□□□ 0.89
SMARCD2-207ENST00000578234 POGZQ7Z3K3 1410 aa20.61■□□□□ 0.89
SMARCD2-207ENST00000578234 MLECQ14165 292 aa20.6■□□□□ 0.89
SMARCD2-207ENST00000578234 TROQ12816 1431 aaPredicted RBP20.6■□□□□ 0.89
SMARCD2-207ENST00000578234 MYO5CQ9NQX4 1742 aa20.59■□□□□ 0.89
SMARCD2-207ENST00000578234 CLIP1P30622 1438 aa20.57■□□□□ 0.88
SMARCD2-207ENST00000578234 MYT1LQ9UL68 1186 aa20.57■□□□□ 0.88
SMARCD2-207ENST00000578234 KIF14Q15058 1648 aa20.56■□□□□ 0.88
SMARCD2-207ENST00000578234 RIMS1Q86UR5 1692 aaKnown RBP20.55■□□□□ 0.88
SMARCD2-207ENST00000578234 LRRIQ1Q96JM4 1722 aa20.54■□□□□ 0.88
SMARCD2-207ENST00000578234 SIGLEC1Q9BZZ2 1709 aa20.54■□□□□ 0.88
SMARCD2-207ENST00000578234 PCF11O94913 1555 aaKnown RBP20.53■□□□□ 0.88
SMARCD2-207ENST00000578234 ATP10AO60312 1499 aa20.52■□□□□ 0.88
SMARCD2-207ENST00000578234 LMTK3Q96Q04 1460 aa20.52■□□□□ 0.88
SMARCD2-207ENST00000578234 CASKIN1Q8WXD9 1431 aa20.52■□□□□ 0.87
SMARCD2-207ENST00000578234 ARHGAP5Q13017 1502 aa20.51■□□□□ 0.87
SMARCD2-207ENST00000578234 ZNF518AQ6AHZ1 1483 aa20.5■□□□□ 0.87
SMARCD2-207ENST00000578234 CCDC18Q5T9S5 1454 aa20.5■□□□□ 0.87
SMARCD2-207ENST00000578234 AFAP1Q8N556 730 aa20.49■□□□□ 0.87
SMARCD2-207ENST00000578234 C9orf84Q5VXU9 1444 aa20.48■□□□□ 0.87
SMARCD2-207ENST00000578234 HSPA2P54652 639 aa20.47■□□□□ 0.87
SMARCD2-207ENST00000578234 KDM5CP41229 1560 aa20.46■□□□□ 0.87
SMARCD2-207ENST00000578234 CDC42BPBQ9Y5S2 1711 aa20.45■□□□□ 0.86
SMARCD2-207ENST00000578234 FER1L4A9Z1Z3 1794 aa20.44■□□□□ 0.86
SMARCD2-207ENST00000578234 ARHGEF12Q9NZN5 1544 aa20.44■□□□□ 0.86
SMARCD2-207ENST00000578234 FBXO41Q8TF61 875 aa20.44■□□□□ 0.86
SMARCD2-207ENST00000578234 FYCO1Q9BQS8 1478 aa20.43■□□□□ 0.86
SMARCD2-207ENST00000578234 PREX2Q70Z35 1606 aa20.42■□□□□ 0.86
SMARCD2-207ENST00000578234 MLH3Q9UHC1 1453 aa20.41■□□□□ 0.86
SMARCD2-207ENST00000578234 REREQ9P2R6 1566 aa20.38■□□□□ 0.85
SMARCD2-207ENST00000578234 DIP2CQ9Y2E4 1556 aa20.38■□□□□ 0.85
SMARCD2-207ENST00000578234 TRAPPC8Q9Y2L5 1435 aa20.37■□□□□ 0.85
SMARCD2-207ENST00000578234 ABCC1P33527 1531 aa20.37■□□□□ 0.85
SMARCD2-207ENST00000578234 CEBPAP49715 358 aaPredicted RBP20.35■□□□□ 0.85
SMARCD2-207ENST00000578234 CDC42BPAQ5VT25 1732 aa20.35■□□□□ 0.85
SMARCD2-207ENST00000578234 ITSN2Q9NZM3 1697 aa20.33■□□□□ 0.85
SMARCD2-207ENST00000578234 ABCA6Q8N139 1617 aa20.33■□□□□ 0.84
SMARCD2-207ENST00000578234 ESF1Q9H501 851 aaKnown RBP20.32■□□□□ 0.84
SMARCD2-207ENST00000578234 AGLP35573 1532 aa20.32■□□□□ 0.84
SMARCD2-207ENST00000578234 GPATCH8Q9UKJ3 1502 aaKnown RBP20.31■□□□□ 0.84
SMARCD2-207ENST00000578234 ZNF777Q9ULD5 760 aaPredicted RBP20.3■□□□□ 0.84
SMARCD2-207ENST00000578234 SETD1BQ9UPS6 1966 aaKnown RBP20.3■□□□□ 0.84
SMARCD2-207ENST00000578234 PREX1Q8TCU6 1659 aa20.29■□□□□ 0.84
SMARCD2-207ENST00000578234 KIDINS220Q9ULH0 1771 aa20.29■□□□□ 0.84
SMARCD2-207ENST00000578234 SAMD9LQ8IVG5 1584 aa20.26■□□□□ 0.83
SMARCD2-207ENST00000578234 HNRNPMP52272 730 aaKnown RBP eCLIP20.25■□□□□ 0.83
SMARCD2-207ENST00000578234 CFDP1Q9UEE9 299 aaPredicted RBP20.25■□□□□ 0.83
SMARCD2-207ENST00000578234 KIAA1107Q9UPP5 1409 aa20.25■□□□□ 0.83
SMARCD2-207ENST00000578234 MTUS2Q5JR59 1369 aa20.24■□□□□ 0.83
SMARCD2-207ENST00000578234 UHRF1BP1Q6BDS2 1440 aa20.24■□□□□ 0.83
SMARCD2-207ENST00000578234 SPAG9O60271 1321 aaKnown RBP20.24■□□□□ 0.83
SMARCD2-207ENST00000578234 CCNB3Q8WWL7 1395 aa20.23■□□□□ 0.83
SMARCD2-207ENST00000578234 SYCP2Q9BX26 1530 aa20.23■□□□□ 0.83
SMARCD2-207ENST00000578234 PLEKHH2Q8IVE3 1493 aa20.23■□□□□ 0.83
SMARCD2-207ENST00000578234 C3P01024 1663 aa20.22■□□□□ 0.83
SMARCD2-207ENST00000578234 CNTLNQ9NXG0 1405 aa20.21■□□□□ 0.83
SMARCD2-207ENST00000578234 CERKQ8TCT0 537 aa20.21■□□□□ 0.83
SMARCD2-207ENST00000578234 DMRT2Q9Y5R5 561 aa20.21■□□□□ 0.83
SMARCD2-207ENST00000578234 ATP7AQ04656 1500 aa20.17■□□□□ 0.82
SMARCD2-207ENST00000578234 STRCQ7RTU9 1775 aa20.16■□□□□ 0.82
SMARCD2-207ENST00000578234 CEP162Q5TB80 1403 aa20.15■□□□□ 0.82
SMARCD2-207ENST00000578234 INO80Q9ULG1 1556 aaPredicted RBP20.14■□□□□ 0.81
SMARCD2-207ENST00000578234 EHBP1L1Q8N3D4 1523 aa20.14■□□□□ 0.81
SMARCD2-207ENST00000578234 A2MP01023 1474 aa20.13■□□□□ 0.81
SMARCD2-207ENST00000578234 SUPT6HQ7KZ85 1726 aaKnown RBP20.13■□□□□ 0.81
SMARCD2-207ENST00000578234 MROH2AA6NES4 1674 aa20.13■□□□□ 0.81
SMARCD2-207ENST00000578234 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
SMARCD2-207ENST00000578234 ZMYM3Q14202 1370 aa20.12■□□□□ 0.81
SMARCD2-207ENST00000578234 ZNF644Q9H582 1327 aaPredicted RBP20.12■□□□□ 0.81
SMARCD2-207ENST00000578234 PLXNC1O60486 1568 aa20.12■□□□□ 0.81
SMARCD2-207ENST00000578234 NPATQ14207 1427 aa20.11■□□□□ 0.81
SMARCD2-207ENST00000578234 MBD5Q9P267 1494 aa20.1■□□□□ 0.81
SMARCD2-207ENST00000578234 PTPRTO14522 1441 aa20.1■□□□□ 0.81
SMARCD2-207ENST00000578234 PPP6R1Q9UPN7 881 aa20.08■□□□□ 0.81
SMARCD2-207ENST00000578234 GGT6Q6P531 493 aa20.07■□□□□ 0.8
SMARCD2-207ENST00000578234 RTEL1-TNFRSF6BF6WH68 1400 aa20.07■□□□□ 0.8
SMARCD2-207ENST00000578234 ADGBQ8N7X0 1667 aa20.07■□□□□ 0.8
SMARCD2-207ENST00000578234 NCOA1Q15788 1441 aa20.04■□□□□ 0.8
SMARCD2-207ENST00000578234 RSPH4AQ5TD94 716 aa20.04■□□□□ 0.8
SMARCD2-207ENST00000578234 CLTCQ00610 1675 aaKnown RBP20.03■□□□□ 0.8
SMARCD2-207ENST00000578234 NCOA2Q15596 1464 aa20.03■□□□□ 0.8
SMARCD2-207ENST00000578234 DHX29Q7Z478 1369 aaKnown RBP20.02■□□□□ 0.8
SMARCD2-207ENST00000578234 PTPRKQ15262 1439 aa20.01■□□□□ 0.79
SMARCD2-207ENST00000578234 CAMSAP1Q5T5Y3 1602 aa19.99■□□□□ 0.79
SMARCD2-207ENST00000578234 CCDC141Q6ZP82 1450 aa19.99■□□□□ 0.79
SMARCD2-207ENST00000578234 CAMSAP2Q08AD1 1489 aa19.98■□□□□ 0.79
SMARCD2-207ENST00000578234 LOC105371045A0A1W2PR82 267 aa19.96■□□□□ 0.79
SMARCD2-207ENST00000578234 LTBP4Q8N2S1 1624 aa19.95■□□□□ 0.78
SMARCD2-207ENST00000578234 MYO3AQ8NEV4 1616 aa19.95■□□□□ 0.78
SMARCD2-207ENST00000578234 VPS8Q8N3P4 1428 aa19.95■□□□□ 0.78
SMARCD2-207ENST00000578234 ZNF142P52746 1687 aaPredicted RBP19.95■□□□□ 0.78
SMARCD2-207ENST00000578234 KIF3BO15066 747 aa19.95■□□□□ 0.78
SMARCD2-207ENST00000578234 NCKAP5LQ9HCH0 1330 aa19.95■□□□□ 0.78
SMARCD2-207ENST00000578234 DISP3Q9P2K9 1392 aa19.94■□□□□ 0.78
SMARCD2-207ENST00000578234 PLA2R1Q13018 1463 aa19.93■□□□□ 0.78
SMARCD2-207ENST00000578234 LRRC9Q6ZRR7 1453 aa19.93■□□□□ 0.78
SMARCD2-207ENST00000578234 CEP170BQ9Y4F5 1589 aaPredicted RBP19.93■□□□□ 0.78
SMARCD2-207ENST00000578234 TSPY4P0CV99 314 aa19.93■□□□□ 0.78
SMARCD2-207ENST00000578234 TSPY10P0CW01 314 aa19.93■□□□□ 0.78
SMARCD2-207ENST00000578234 PKD2Q13563 968 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms