RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 DAPK1P53355 1430 aa24.94■■□□□ 1.58
ERBB2-205ENST00000578199 ABCC5O15440 1437 aa24.93■■□□□ 1.58
ERBB2-205ENST00000578199 AKNAQ7Z591 1439 aa24.92■■□□□ 1.58
ERBB2-205ENST00000578199 KDM5BQ9UGL1 1544 aa24.92■■□□□ 1.58
ERBB2-205ENST00000578199 ZNF777Q9ULD5 760 aaPredicted RBP24.89■■□□□ 1.58
ERBB2-205ENST00000578199 CFDP1Q9UEE9 299 aaPredicted RBP24.87■■□□□ 1.57
ERBB2-205ENST00000578199 NUP160Q12769 1436 aa24.87■■□□□ 1.57
ERBB2-205ENST00000578199 TROQ12816 1431 aaPredicted RBP24.87■■□□□ 1.57
ERBB2-205ENST00000578199 DNMT1P26358 1616 aaKnown RBP24.86■■□□□ 1.57
ERBB2-205ENST00000578199 CARMIL2Q6F5E8 1435 aa24.86■■□□□ 1.57
ERBB2-205ENST00000578199 KIF14Q15058 1648 aa24.84■■□□□ 1.57
ERBB2-205ENST00000578199 ROCK1Q13464 1354 aa24.83■■□□□ 1.56
ERBB2-205ENST00000578199 L3MBTL2Q969R5 705 aa24.81■■□□□ 1.56
ERBB2-205ENST00000578199 GPATCH8Q9UKJ3 1502 aaKnown RBP24.8■■□□□ 1.56
ERBB2-205ENST00000578199 CAMSAP2Q08AD1 1489 aa24.8■■□□□ 1.56
ERBB2-205ENST00000578199 ANP32CO43423 234 aa24.78■■□□□ 1.56
ERBB2-205ENST00000578199 SLC4A1APQ9BWU0 796 aaKnown RBP24.78■■□□□ 1.56
ERBB2-205ENST00000578199 HSPA5P11021 654 aaKnown RBP24.77■■□□□ 1.56
ERBB2-205ENST00000578199 PLEKHD1A6NEE1 506 aa24.74■■□□□ 1.55
ERBB2-205ENST00000578199 ANKRD30BQ9BXX2 1392 aa24.74■■□□□ 1.55
ERBB2-205ENST00000578199 SUPT16HQ9Y5B9 1047 aaKnown RBP24.71■■□□□ 1.55
ERBB2-205ENST00000578199 ITSN2Q9NZM3 1697 aa24.71■■□□□ 1.55
ERBB2-205ENST00000578199 ATP10BO94823 1461 aa24.7■■□□□ 1.55
ERBB2-205ENST00000578199 NCOA1Q15788 1441 aa24.7■■□□□ 1.55
ERBB2-205ENST00000578199 ADCY10Q96PN6 1610 aa24.69■■□□□ 1.54
ERBB2-205ENST00000578199 ABCA8O94911 1581 aa24.69■■□□□ 1.54
ERBB2-205ENST00000578199 WASHC2AQ641Q2 1341 aa24.68■■□□□ 1.54
ERBB2-205ENST00000578199 NBPF8Q3BBV2 869 aa24.67■■□□□ 1.54
ERBB2-205ENST00000578199 CCER2I3L3R5 266 aa24.67■■□□□ 1.54
ERBB2-205ENST00000578199 EIF4G2P78344 907 aaKnown RBP eCLIP24.67■■□□□ 1.54
ERBB2-205ENST00000578199 RPRD2Q5VT52 1461 aaKnown RBP24.66■■□□□ 1.54
ERBB2-205ENST00000578199 PZPP20742 1482 aa24.64■■□□□ 1.53
ERBB2-205ENST00000578199 CDC42BPAQ5VT25 1732 aa24.62■■□□□ 1.53
ERBB2-205ENST00000578199 C11orf95C9JLR9 678 aaPredicted RBP24.62■■□□□ 1.53
ERBB2-205ENST00000578199 PTPRGP23470 1445 aa24.61■■□□□ 1.53
ERBB2-205ENST00000578199 ADGBQ8N7X0 1667 aa24.61■■□□□ 1.53
ERBB2-205ENST00000578199 ABCC10Q5T3U5 1492 aa24.6■■□□□ 1.53
ERBB2-205ENST00000578199 TEX14Q8IWB6 1497 aa24.59■■□□□ 1.53
ERBB2-205ENST00000578199 CROCC2H7BZ55 1655 aa24.59■■□□□ 1.53
ERBB2-205ENST00000578199 ANKRD30AQ9BXX3 1397 aa24.59■■□□□ 1.53
ERBB2-205ENST00000578199 HNRNPMP52272 730 aaKnown RBP eCLIP24.59■■□□□ 1.53
ERBB2-205ENST00000578199 PKD2Q13563 968 aa24.57■■□□□ 1.52
ERBB2-205ENST00000578199 ADGRL2O95490 1459 aa24.57■■□□□ 1.52
ERBB2-205ENST00000578199 ANKRD50Q9ULJ7 1429 aa24.55■■□□□ 1.52
ERBB2-205ENST00000578199 CHD1O14646 1710 aa24.54■■□□□ 1.52
ERBB2-205ENST00000578199 TSPY4P0CV99 314 aa24.52■■□□□ 1.52
ERBB2-205ENST00000578199 TSPY10P0CW01 314 aa24.52■■□□□ 1.52
ERBB2-205ENST00000578199 C9orf84Q5VXU9 1444 aa24.51■■□□□ 1.51
ERBB2-205ENST00000578199 ZNF326Q5BKZ1 582 aaKnown RBP24.51■■□□□ 1.51
ERBB2-205ENST00000578199 KIAA1107Q9UPP5 1409 aa24.51■■□□□ 1.51
ERBB2-205ENST00000578199 NUP155O75694 1391 aa24.48■■□□□ 1.51
ERBB2-205ENST00000578199 CCDC7Q96M83 1385 aa24.46■■□□□ 1.51
ERBB2-205ENST00000578199 BCANQ96GW7 911 aa24.46■■□□□ 1.51
ERBB2-205ENST00000578199 FKBP8Q14318 412 aa24.43■■□□□ 1.5
ERBB2-205ENST00000578199 ERCC6L2Q5T890 1561 aa24.43■■□□□ 1.5
ERBB2-205ENST00000578199 CCDC184Q52MB2 194 aa24.43■■□□□ 1.5
ERBB2-205ENST00000578199 CNTLNQ9NXG0 1405 aa24.43■■□□□ 1.5
ERBB2-205ENST00000578199 SPATA31E1Q6ZUB1 1445 aa24.42■■□□□ 1.5
ERBB2-205ENST00000578199 KIF15Q9NS87 1388 aa24.42■■□□□ 1.5
ERBB2-205ENST00000578199 MBD5Q9P267 1494 aa24.41■■□□□ 1.5
ERBB2-205ENST00000578199 SHANK2Q9UPX8 1470 aa24.41■■□□□ 1.5
ERBB2-205ENST00000578199 KIF7Q2M1P5 1343 aa24.41■■□□□ 1.5
ERBB2-205ENST00000578199 CDC42BPBQ9Y5S2 1711 aa24.41■■□□□ 1.5
ERBB2-205ENST00000578199 SAMD9LQ8IVG5 1584 aa24.39■■□□□ 1.5
ERBB2-205ENST00000578199 HNRNPUQ00839 825 aaKnown RBP eCLIP24.38■■□□□ 1.49
ERBB2-205ENST00000578199 POLR3GLQ9BT43 218 aa24.34■■□□□ 1.49
ERBB2-205ENST00000578199 PRKRIP1Q9H875 184 aaPredicted RBP24.34■■□□□ 1.49
ERBB2-205ENST00000578199 KDM2AQ9Y2K7 1162 aa24.34■■□□□ 1.49
ERBB2-205ENST00000578199 SHROOM2Q13796 1616 aa24.34■■□□□ 1.49
ERBB2-205ENST00000578199 PREX2Q70Z35 1606 aa24.33■■□□□ 1.49
ERBB2-205ENST00000578199 ARHGEF5Q12774 1597 aa24.33■■□□□ 1.49
ERBB2-205ENST00000578199 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.49
ERBB2-205ENST00000578199 TTC37Q6PGP7 1564 aa24.33■■□□□ 1.49
ERBB2-205ENST00000578199 CCDC141Q6ZP82 1450 aa24.33■■□□□ 1.48
ERBB2-205ENST00000578199 USP47Q96K76 1375 aa24.3■■□□□ 1.48
ERBB2-205ENST00000578199 ARHGAP5Q13017 1502 aa24.3■■□□□ 1.48
ERBB2-205ENST00000578199 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.3■■□□□ 1.48
ERBB2-205ENST00000578199 SYCP2Q9BX26 1530 aa24.3■■□□□ 1.48
ERBB2-205ENST00000578199 FAM9BQ8IZU0 186 aa24.27■■□□□ 1.48
ERBB2-205ENST00000578199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.27■■□□□ 1.48
ERBB2-205ENST00000578199 DCAF11Q8TEB1 546 aa24.27■■□□□ 1.48
ERBB2-205ENST00000578199 BCORL1Q5H9F3 1711 aa24.26■■□□□ 1.47
ERBB2-205ENST00000578199 KDM5DQ9BY66 1539 aa24.26■■□□□ 1.47
ERBB2-205ENST00000578199 ABCC2Q92887 1545 aa24.25■■□□□ 1.47
ERBB2-205ENST00000578199 NEFLP07196 543 aa24.25■■□□□ 1.47
ERBB2-205ENST00000578199 RSPH4AQ5TD94 716 aa24.25■■□□□ 1.47
ERBB2-205ENST00000578199 MRS2Q9HD23 443 aa24.25■■□□□ 1.47
ERBB2-205ENST00000578199 POLR1AO95602 1720 aaPredicted RBP24.24■■□□□ 1.47
ERBB2-205ENST00000578199 CARD11Q9BXL7 1154 aa24.23■■□□□ 1.47
ERBB2-205ENST00000578199 FAM135AQ9P2D6 1515 aa24.22■■□□□ 1.47
ERBB2-205ENST00000578199 KDM5CP41229 1560 aa24.2■■□□□ 1.47
ERBB2-205ENST00000578199 UHRF1BP1Q6BDS2 1440 aa24.19■■□□□ 1.46
ERBB2-205ENST00000578199 RGL3Q3MIN7 710 aa24.18■■□□□ 1.46
ERBB2-205ENST00000578199 MYO5CQ9NQX4 1742 aa24.17■■□□□ 1.46
ERBB2-205ENST00000578199 ARHGEF12Q9NZN5 1544 aa24.17■■□□□ 1.46
ERBB2-205ENST00000578199 TSHZ2Q9NRE2 1034 aa24.17■■□□□ 1.46
ERBB2-205ENST00000578199 RALGAPBQ86X10 1494 aa24.16■■□□□ 1.46
ERBB2-205ENST00000578199 ST20-MTHFSA0A0A6YYL1 179 aa24.15■■□□□ 1.46
ERBB2-205ENST00000578199 IRX6P78412 446 aaPredicted RBP24.15■■□□□ 1.46
ERBB2-205ENST00000578199 PLEKHH2Q8IVE3 1493 aa24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms