RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 COL17A1Q9UMD9 1497 aaPredicted RBP25.4■■□□□ 1.66
PFN1-203ENST00000574872 ARAP3Q8WWN8 1544 aa25.39■■□□□ 1.66
PFN1-203ENST00000574872 EFCAB2Q5VUJ9 269 aa25.39■■□□□ 1.66
PFN1-203ENST00000574872 CDC42BPBQ9Y5S2 1711 aa25.39■■□□□ 1.65
PFN1-203ENST00000574872 CFAP74Q9C0B2 1584 aa25.39■■□□□ 1.65
PFN1-203ENST00000574872 AKNAQ7Z591 1439 aa25.38■■□□□ 1.65
PFN1-203ENST00000574872 PHLDB1Q86UU1 1377 aa25.35■■□□□ 1.65
PFN1-203ENST00000574872 PPARGC1BQ86YN6 1023 aaKnown RBP25.34■■□□□ 1.65
PFN1-203ENST00000574872 CFDP1Q9UEE9 299 aaPredicted RBP25.34■■□□□ 1.65
PFN1-203ENST00000574872 ZNF777Q9ULD5 760 aaPredicted RBP25.34■■□□□ 1.65
PFN1-203ENST00000574872 ADGRL1O94910 1474 aa25.33■■□□□ 1.65
PFN1-203ENST00000574872 RAPGEF3O95398 923 aa25.31■■□□□ 1.64
PFN1-203ENST00000574872 ITSN2Q9NZM3 1697 aa25.31■■□□□ 1.64
PFN1-203ENST00000574872 SCAPERQ9BY12 1400 aa25.29■■□□□ 1.64
PFN1-203ENST00000574872 DENND4BO75064 1496 aaPredicted RBP25.28■■□□□ 1.64
PFN1-203ENST00000574872 SAMD9LQ8IVG5 1584 aa25.27■■□□□ 1.64
PFN1-203ENST00000574872 ABCC1P33527 1531 aa25.25■■□□□ 1.63
PFN1-203ENST00000574872 FRMPD1Q5SYB0 1578 aa25.24■■□□□ 1.63
PFN1-203ENST00000574872 MYOM3Q5VTT5 1437 aa25.24■■□□□ 1.63
PFN1-203ENST00000574872 ZNF644Q9H582 1327 aaPredicted RBP25.24■■□□□ 1.63
PFN1-203ENST00000574872 ARHGEF12Q9NZN5 1544 aa25.22■■□□□ 1.63
PFN1-203ENST00000574872 POGZQ7Z3K3 1410 aa25.22■■□□□ 1.63
PFN1-203ENST00000574872 SYCP2Q9BX26 1530 aa25.21■■□□□ 1.63
PFN1-203ENST00000574872 RICTORQ6R327 1708 aa25.2■■□□□ 1.63
PFN1-203ENST00000574872 HNRNPMP52272 730 aaKnown RBP eCLIP25.19■■□□□ 1.62
PFN1-203ENST00000574872 CAMSAP2Q08AD1 1489 aa25.18■■□□□ 1.62
PFN1-203ENST00000574872 TRAPPC8Q9Y2L5 1435 aa25.18■■□□□ 1.62
PFN1-203ENST00000574872 PLEKHH2Q8IVE3 1493 aa25.17■■□□□ 1.62
PFN1-203ENST00000574872 AFAP1Q8N556 730 aa25.17■■□□□ 1.62
PFN1-203ENST00000574872 MIA2Q96PC5 1412 aa25.15■■□□□ 1.62
PFN1-203ENST00000574872 ZNF518AQ6AHZ1 1483 aa25.15■■□□□ 1.62
PFN1-203ENST00000574872 KIAA1107Q9UPP5 1409 aa25.14■■□□□ 1.62
PFN1-203ENST00000574872 FGD6Q6ZV73 1430 aa25.13■■□□□ 1.61
PFN1-203ENST00000574872 ZMYM4Q5VZL5 1548 aa25.12■■□□□ 1.61
PFN1-203ENST00000574872 KDM5CP41229 1560 aa25.1■■□□□ 1.61
PFN1-203ENST00000574872 MBD5Q9P267 1494 aa25.09■■□□□ 1.61
PFN1-203ENST00000574872 PTPN23Q9H3S7 1636 aa25.09■■□□□ 1.61
PFN1-203ENST00000574872 MYT1LQ9UL68 1186 aa25.09■■□□□ 1.61
PFN1-203ENST00000574872 YEATS2Q9ULM3 1422 aa25.07■■□□□ 1.6
PFN1-203ENST00000574872 ZFYVE16Q7Z3T8 1539 aa25.06■■□□□ 1.6
PFN1-203ENST00000574872 ARHGEF40Q8TER5 1519 aa25.05■■□□□ 1.6
PFN1-203ENST00000574872 HECW2Q9P2P5 1572 aa25.05■■□□□ 1.6
PFN1-203ENST00000574872 CCDC141Q6ZP82 1450 aa25.04■■□□□ 1.6
PFN1-203ENST00000574872 TCOF1Q13428 1488 aaKnown RBP25.03■■□□□ 1.6
PFN1-203ENST00000574872 MAGI2Q86UL8 1455 aa25.03■■□□□ 1.6
PFN1-203ENST00000574872 FAM50AQ14320 339 aaKnown RBP25.03■■□□□ 1.6
PFN1-203ENST00000574872 SPAG9O60271 1321 aaKnown RBP25.03■■□□□ 1.6
PFN1-203ENST00000574872 MLH3Q9UHC1 1453 aa25.01■■□□□ 1.59
PFN1-203ENST00000574872 ARHGEF5Q12774 1597 aa25.01■■□□□ 1.59
PFN1-203ENST00000574872 KIDINS220Q9ULH0 1771 aa24.98■■□□□ 1.59
PFN1-203ENST00000574872 ATP7AQ04656 1500 aa24.97■■□□□ 1.59
PFN1-203ENST00000574872 RSPH4AQ5TD94 716 aa24.97■■□□□ 1.59
PFN1-203ENST00000574872 INO80Q9ULG1 1556 aaPredicted RBP24.97■■□□□ 1.59
PFN1-203ENST00000574872 ABCA6Q8N139 1617 aa24.96■■□□□ 1.59
PFN1-203ENST00000574872 DIP2CQ9Y2E4 1556 aa24.95■■□□□ 1.58
PFN1-203ENST00000574872 TSPY4P0CV99 314 aa24.94■■□□□ 1.58
PFN1-203ENST00000574872 TSPY10P0CW01 314 aa24.94■■□□□ 1.58
PFN1-203ENST00000574872 ATP10AO60312 1499 aa24.94■■□□□ 1.58
PFN1-203ENST00000574872 ABCC5O15440 1437 aa24.94■■□□□ 1.58
PFN1-203ENST00000574872 DAPK1P53355 1430 aa24.93■■□□□ 1.58
PFN1-203ENST00000574872 C9orf84Q5VXU9 1444 aa24.92■■□□□ 1.58
PFN1-203ENST00000574872 ARID4BQ4LE39 1312 aaPredicted RBP24.91■■□□□ 1.58
PFN1-203ENST00000574872 DNMT1P26358 1616 aaKnown RBP24.91■■□□□ 1.58
PFN1-203ENST00000574872 RTEL1-TNFRSF6BF6WH68 1400 aa24.89■■□□□ 1.58
PFN1-203ENST00000574872 SIGLEC1Q9BZZ2 1709 aa24.89■■□□□ 1.57
PFN1-203ENST00000574872 RRBP1Q9P2E9 1410 aaKnown RBP24.88■■□□□ 1.57
PFN1-203ENST00000574872 CROCC2H7BZ55 1655 aa24.88■■□□□ 1.57
PFN1-203ENST00000574872 MAST1Q9Y2H9 1570 aa24.86■■□□□ 1.57
PFN1-203ENST00000574872 SHANK2Q9UPX8 1470 aa24.86■■□□□ 1.57
PFN1-203ENST00000574872 CHIC2Q9UKJ5 165 aa24.86■■□□□ 1.57
PFN1-203ENST00000574872 ITGAEP38570 1179 aa24.85■■□□□ 1.57
PFN1-203ENST00000574872 A2MP01023 1474 aa24.83■■□□□ 1.56
PFN1-203ENST00000574872 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.81■■□□□ 1.565e-8■■■■□ 21
PFN1-203ENST00000574872 REREQ9P2R6 1566 aa24.81■■□□□ 1.56
PFN1-203ENST00000574872 MLECQ14165 292 aa24.81■■□□□ 1.56
PFN1-203ENST00000574872 ADGBQ8N7X0 1667 aa24.81■■□□□ 1.56
PFN1-203ENST00000574872 PTPRKQ15262 1439 aa24.8■■□□□ 1.56
PFN1-203ENST00000574872 RRP7BPQ9NSQ0 103 aa24.78■■□□□ 1.56
PFN1-203ENST00000574872 PLXNC1O60486 1568 aa24.78■■□□□ 1.56
PFN1-203ENST00000574872 KDM4FA0A1W2PPD8 638 aa24.76■■□□□ 1.55
PFN1-203ENST00000574872 DHX29Q7Z478 1369 aaKnown RBP24.76■■□□□ 1.55
PFN1-203ENST00000574872 KIF15Q9NS87 1388 aa24.76■■□□□ 1.55
PFN1-203ENST00000574872 BCORL1Q5H9F3 1711 aa24.75■■□□□ 1.55
PFN1-203ENST00000574872 ANKRD30AQ9BXX3 1397 aa24.75■■□□□ 1.55
PFN1-203ENST00000574872 AGLP35573 1532 aa24.75■■□□□ 1.55
PFN1-203ENST00000574872 ADGRL2O95490 1459 aa24.72■■□□□ 1.55
PFN1-203ENST00000574872 NCOA1Q15788 1441 aa24.72■■□□□ 1.55
PFN1-203ENST00000574872 DUOX2Q9NRD8 1548 aa24.7■■□□□ 1.54
PFN1-203ENST00000574872 ADAMTSL3P82987 1691 aa24.69■■□□□ 1.54
PFN1-203ENST00000574872 KIF3BO15066 747 aa24.68■■□□□ 1.54
PFN1-203ENST00000574872 MADDQ8WXG6 1647 aa24.68■■□□□ 1.54
PFN1-203ENST00000574872 GGT6Q6P531 493 aa24.66■■□□□ 1.54
PFN1-203ENST00000574872 ROCK1Q13464 1354 aa24.65■■□□□ 1.54
PFN1-203ENST00000574872 ERBINQ96RT1 1412 aa24.63■■□□□ 1.53
PFN1-203ENST00000574872 FER1L4A9Z1Z3 1794 aa24.62■■□□□ 1.53
PFN1-203ENST00000574872 RIMS1Q86UR5 1692 aaKnown RBP24.61■■□□□ 1.53
PFN1-203ENST00000574872 EIF2AK4Q9P2K8 1649 aaKnown RBP24.61■■□□□ 1.53
PFN1-203ENST00000574872 PLPPR3Q6T4P5 718 aa24.59■■□□□ 1.53
PFN1-203ENST00000574872 ESF1Q9H501 851 aaKnown RBP24.59■■□□□ 1.53
PFN1-203ENST00000574872 ANKRD50Q9ULJ7 1429 aa24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms