RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 KIF14Q15058 1648 aa24.86■■□□□ 1.57
CTNS-209ENST00000574776 MAGI2Q86UL8 1455 aa24.85■■□□□ 1.57
CTNS-209ENST00000574776 POGZQ7Z3K3 1410 aa24.85■■□□□ 1.57
CTNS-209ENST00000574776 MYO5CQ9NQX4 1742 aa24.84■■□□□ 1.57
CTNS-209ENST00000574776 MLECQ14165 292 aa24.84■■□□□ 1.57
CTNS-209ENST00000574776 LRRIQ1Q96JM4 1722 aa24.83■■□□□ 1.57
CTNS-209ENST00000574776 PLPPR3Q6T4P5 718 aa24.83■■□□□ 1.57
CTNS-209ENST00000574776 CLIP1P30622 1438 aa24.83■■□□□ 1.57
CTNS-209ENST00000574776 RIMS1Q86UR5 1692 aaKnown RBP24.81■■□□□ 1.56
CTNS-209ENST00000574776 SIGLEC1Q9BZZ2 1709 aa24.8■■□□□ 1.56
CTNS-209ENST00000574776 CASKIN1Q8WXD9 1431 aa24.79■■□□□ 1.56
CTNS-209ENST00000574776 AFAP1Q8N556 730 aa24.79■■□□□ 1.56
CTNS-209ENST00000574776 ARHGAP5Q13017 1502 aa24.78■■□□□ 1.56
CTNS-209ENST00000574776 ATP10AO60312 1499 aa24.77■■□□□ 1.56
CTNS-209ENST00000574776 MYT1LQ9UL68 1186 aa24.75■■□□□ 1.55
CTNS-209ENST00000574776 PCF11O94913 1555 aaKnown RBP24.75■■□□□ 1.55
CTNS-209ENST00000574776 CCDC18Q5T9S5 1454 aa24.72■■□□□ 1.55
CTNS-209ENST00000574776 ZNF518AQ6AHZ1 1483 aa24.71■■□□□ 1.55
CTNS-209ENST00000574776 LMTK3Q96Q04 1460 aa24.7■■□□□ 1.55
CTNS-209ENST00000574776 CDC42BPBQ9Y5S2 1711 aa24.7■■□□□ 1.54
CTNS-209ENST00000574776 C9orf84Q5VXU9 1444 aa24.69■■□□□ 1.54
CTNS-209ENST00000574776 HSPA2P54652 639 aa24.67■■□□□ 1.54
CTNS-209ENST00000574776 FYCO1Q9BQS8 1478 aa24.65■■□□□ 1.54
CTNS-209ENST00000574776 FER1L4A9Z1Z3 1794 aa24.65■■□□□ 1.54
CTNS-209ENST00000574776 KDM5CP41229 1560 aa24.64■■□□□ 1.54
CTNS-209ENST00000574776 TRAPPC8Q9Y2L5 1435 aa24.63■■□□□ 1.53
CTNS-209ENST00000574776 ARHGEF12Q9NZN5 1544 aa24.63■■□□□ 1.53
CTNS-209ENST00000574776 CEBPAP49715 358 aaPredicted RBP24.63■■□□□ 1.53
CTNS-209ENST00000574776 PREX2Q70Z35 1606 aa24.62■■□□□ 1.53
CTNS-209ENST00000574776 ZNF777Q9ULD5 760 aaPredicted RBP24.62■■□□□ 1.53
CTNS-209ENST00000574776 MLH3Q9UHC1 1453 aa24.59■■□□□ 1.53
CTNS-209ENST00000574776 CDC42BPAQ5VT25 1732 aa24.58■■□□□ 1.53
CTNS-209ENST00000574776 ABCC1P33527 1531 aa24.58■■□□□ 1.53
CTNS-209ENST00000574776 DIP2CQ9Y2E4 1556 aa24.58■■□□□ 1.52
CTNS-209ENST00000574776 FBXO41Q8TF61 875 aa24.56■■□□□ 1.52
CTNS-209ENST00000574776 ITSN2Q9NZM3 1697 aa24.54■■□□□ 1.52
CTNS-209ENST00000574776 HNRNPMP52272 730 aaKnown RBP eCLIP24.54■■□□□ 1.52
CTNS-209ENST00000574776 GPATCH8Q9UKJ3 1502 aaKnown RBP24.54■■□□□ 1.52
CTNS-209ENST00000574776 ABCA6Q8N139 1617 aa24.53■■□□□ 1.52
CTNS-209ENST00000574776 CFDP1Q9UEE9 299 aaPredicted RBP24.51■■□□□ 1.51
CTNS-209ENST00000574776 REREQ9P2R6 1566 aa24.5■■□□□ 1.51
CTNS-209ENST00000574776 ESF1Q9H501 851 aaKnown RBP24.49■■□□□ 1.51
CTNS-209ENST00000574776 KIDINS220Q9ULH0 1771 aa24.49■■□□□ 1.51
CTNS-209ENST00000574776 MTUS2Q5JR59 1369 aa24.48■■□□□ 1.51
CTNS-209ENST00000574776 SAMD9LQ8IVG5 1584 aa24.48■■□□□ 1.51
CTNS-209ENST00000574776 CCNB3Q8WWL7 1395 aa24.48■■□□□ 1.51
CTNS-209ENST00000574776 AGLP35573 1532 aa24.46■■□□□ 1.51
CTNS-209ENST00000574776 SPAG9O60271 1321 aaKnown RBP24.46■■□□□ 1.51
CTNS-209ENST00000574776 SYCP2Q9BX26 1530 aa24.45■■□□□ 1.5
CTNS-209ENST00000574776 PREX1Q8TCU6 1659 aa24.43■■□□□ 1.5
CTNS-209ENST00000574776 SETD1BQ9UPS6 1966 aaKnown RBP24.43■■□□□ 1.5
CTNS-209ENST00000574776 KIAA1107Q9UPP5 1409 aa24.42■■□□□ 1.5
CTNS-209ENST00000574776 CEP162Q5TB80 1403 aa24.41■■□□□ 1.5
CTNS-209ENST00000574776 PLEKHH2Q8IVE3 1493 aa24.39■■□□□ 1.5
CTNS-209ENST00000574776 ZNF644Q9H582 1327 aaPredicted RBP24.39■■□□□ 1.5
CTNS-209ENST00000574776 UHRF1BP1Q6BDS2 1440 aa24.39■■□□□ 1.5
CTNS-209ENST00000574776 C3P01024 1663 aa24.38■■□□□ 1.49
CTNS-209ENST00000574776 CERKQ8TCT0 537 aa24.35■■□□□ 1.49
CTNS-209ENST00000574776 DMRT2Q9Y5R5 561 aa24.34■■□□□ 1.49
CTNS-209ENST00000574776 ATP7AQ04656 1500 aa24.34■■□□□ 1.49
CTNS-209ENST00000574776 CNTLNQ9NXG0 1405 aa24.34■■□□□ 1.49
CTNS-209ENST00000574776 SUPT6HQ7KZ85 1726 aaKnown RBP24.33■■□□□ 1.49
CTNS-209ENST00000574776 LOC105371045A0A1W2PR82 267 aa24.33■■□□□ 1.49
CTNS-209ENST00000574776 EHBP1L1Q8N3D4 1523 aa24.31■■□□□ 1.48
CTNS-209ENST00000574776 TIAM1Q13009 1591 aa24.31■■□□□ 1.48
CTNS-209ENST00000574776 STRCQ7RTU9 1775 aa24.31■■□□□ 1.48
CTNS-209ENST00000574776 ZMYM3Q14202 1370 aa24.3■■□□□ 1.48
CTNS-209ENST00000574776 GGT6Q6P531 493 aa24.3■■□□□ 1.48
CTNS-209ENST00000574776 A2MP01023 1474 aa24.3■■□□□ 1.48
CTNS-209ENST00000574776 INO80Q9ULG1 1556 aaPredicted RBP24.29■■□□□ 1.48
CTNS-209ENST00000574776 MBD5Q9P267 1494 aa24.27■■□□□ 1.48
CTNS-209ENST00000574776 PLXNC1O60486 1568 aa24.24■■□□□ 1.47
CTNS-209ENST00000574776 MROH2AA6NES4 1674 aa24.22■■□□□ 1.47
CTNS-209ENST00000574776 NCOA2Q15596 1464 aa24.22■■□□□ 1.47
CTNS-209ENST00000574776 NPATQ14207 1427 aa24.21■■□□□ 1.47
CTNS-209ENST00000574776 CLTCQ00610 1675 aaKnown RBP24.21■■□□□ 1.47
CTNS-209ENST00000574776 RTEL1-TNFRSF6BF6WH68 1400 aa24.2■■□□□ 1.46
CTNS-209ENST00000574776 ADGBQ8N7X0 1667 aa24.19■■□□□ 1.46
CTNS-209ENST00000574776 PPP6R1Q9UPN7 881 aa24.19■■□□□ 1.46
CTNS-209ENST00000574776 PTPRTO14522 1441 aa24.18■■□□□ 1.46
CTNS-209ENST00000574776 RSPH4AQ5TD94 716 aa24.18■■□□□ 1.46
CTNS-209ENST00000574776 DHX29Q7Z478 1369 aaKnown RBP24.17■■□□□ 1.46
CTNS-209ENST00000574776 CAMSAP2Q08AD1 1489 aa24.15■■□□□ 1.46
CTNS-209ENST00000574776 NCOA1Q15788 1441 aa24.15■■□□□ 1.46
CTNS-209ENST00000574776 VPS8Q8N3P4 1428 aa24.15■■□□□ 1.46
CTNS-209ENST00000574776 KIF3BO15066 747 aa24.14■■□□□ 1.45
CTNS-209ENST00000574776 PTPRKQ15262 1439 aa24.14■■□□□ 1.45
CTNS-209ENST00000574776 CCDC141Q6ZP82 1450 aa24.13■■□□□ 1.45
CTNS-209ENST00000574776 NCKAP5LQ9HCH0 1330 aa24.12■■□□□ 1.45
CTNS-209ENST00000574776 CAMSAP1Q5T5Y3 1602 aa24.12■■□□□ 1.45
CTNS-209ENST00000574776 TSPY4P0CV99 314 aa24.11■■□□□ 1.45
CTNS-209ENST00000574776 TSPY10P0CW01 314 aa24.11■■□□□ 1.45
CTNS-209ENST00000574776 KANK4Q5T7N3 995 aaPredicted RBP24.11■■□□□ 1.45
CTNS-209ENST00000574776 LRRC9Q6ZRR7 1453 aa24.11■■□□□ 1.45
CTNS-209ENST00000574776 FBXO31Q5XUX0 539 aaPredicted RBP24.06■■□□□ 1.44
CTNS-209ENST00000574776 MYO3AQ8NEV4 1616 aa24.05■■□□□ 1.44
CTNS-209ENST00000574776 WASHC2CQ9Y4E1 1318 aa24.05■■□□□ 1.44
CTNS-209ENST00000574776 ARHGEF5Q12774 1597 aa24.03■■□□□ 1.44
CTNS-209ENST00000574776 PKD2Q13563 968 aa24.03■■□□□ 1.44
CTNS-209ENST00000574776 CEP170BQ9Y4F5 1589 aaPredicted RBP24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 472.5 ms