RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 NISCHQ9Y2I1 1504 aa37.96■■■■□ 3.67
CTNS-209ENST00000574776 ABCC9O60706 1549 aa34.04■■■■□ 3.04
CTNS-209ENST00000574776 CCDC180Q9P1Z9 1646 aa33.95■■■■□ 3.03
CTNS-209ENST00000574776 RB1CC1Q8TDY2 1594 aa32.35■■■□□ 2.77
CTNS-209ENST00000574776 DCAF8L2P0C7V8 631 aa32.2■■■□□ 2.75
CTNS-209ENST00000574776 NACADO15069 1562 aa32.14■■■□□ 2.74
CTNS-209ENST00000574776 DNAJC5BQ9UF47 199 aa31.97■■■□□ 2.71
CTNS-209ENST00000574776 PABPN1Q86U42 306 aaKnown RBP eCLIP31.78■■■□□ 2.68
CTNS-209ENST00000574776 MYO15BQ96JP2 1530 aa31.68■■■□□ 2.66
CTNS-209ENST00000574776 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
CTNS-209ENST00000574776 ZCCHC6Q5VYS8 1495 aaKnown RBP31.42■■■□□ 2.62
CTNS-209ENST00000574776 BICRAQ9NZM4 1560 aa31.42■■■□□ 2.62
CTNS-209ENST00000574776 DCAF1Q9Y4B6 1507 aa31.29■■■□□ 2.6
CTNS-209ENST00000574776 SCRIBQ14160 1630 aa31.02■■■□□ 2.56
CTNS-209ENST00000574776 SHROOM4Q9ULL8 1493 aa30.91■■■□□ 2.54
CTNS-209ENST00000574776 CC2D2AQ9P2K1 1620 aa30.7■■■□□ 2.51
CTNS-209ENST00000574776 CECR2Q9BXF3 1484 aa30.63■■■□□ 2.49
CTNS-209ENST00000574776 EIF4G1Q04637 1599 aaKnown RBP30.63■■■□□ 2.49
CTNS-209ENST00000574776 NCAPD3P42695 1498 aa29.7■■■□□ 2.35
CTNS-209ENST00000574776 ATAD2BQ9ULI0 1458 aa29.62■■■□□ 2.33
CTNS-209ENST00000574776 SMARCA4P51532 1647 aa29.57■■■□□ 2.32
CTNS-209ENST00000574776 SMARCA2P51531 1590 aa29.51■■■□□ 2.31
CTNS-209ENST00000574776 BAZ1AQ9NRL2 1556 aaPredicted RBP29.43■■■□□ 2.3
CTNS-209ENST00000574776 HMGXB3Q12766 1538 aa29.42■■■□□ 2.3
CTNS-209ENST00000574776 ERCC6Q03468 1493 aa29.36■■■□□ 2.29
CTNS-209ENST00000574776 BAZ1BQ9UIG0 1483 aaKnown RBP29.33■■■□□ 2.29
CTNS-209ENST00000574776 DNAJC5Q9H3Z4 198 aa29.29■■■□□ 2.28
CTNS-209ENST00000574776 MROH2BQ7Z745 1585 aa29.26■■■□□ 2.28
CTNS-209ENST00000574776 NESP48681 1621 aa29.26■■■□□ 2.27
CTNS-209ENST00000574776 PEG3Q9GZU2 1588 aa29.26■■■□□ 2.27
CTNS-209ENST00000574776 CUX2O14529 1486 aa29.24■■■□□ 2.27
CTNS-209ENST00000574776 LAMC3Q9Y6N6 1575 aa28.98■■■□□ 2.23
CTNS-209ENST00000574776 WIZO95785 1651 aa28.91■■■□□ 2.22
CTNS-209ENST00000574776 PDS5BQ9NTI5 1447 aa28.86■■■□□ 2.21
CTNS-209ENST00000574776 THOC2Q8NI27 1593 aaKnown RBP28.86■■■□□ 2.21
CTNS-209ENST00000574776 CADPSQ9ULU8 1353 aa28.83■■■□□ 2.21
CTNS-209ENST00000574776 KIF21AQ7Z4S6 1674 aa28.82■■■□□ 2.2
CTNS-209ENST00000574776 RSF1Q96T23 1441 aaPredicted RBP28.69■■■□□ 2.18
CTNS-209ENST00000574776 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
CTNS-209ENST00000574776 TOP2AP11388 1531 aaKnown RBP28.51■■■□□ 2.15
CTNS-209ENST00000574776 WDR62O43379 1518 aa28.48■■■□□ 2.15
CTNS-209ENST00000574776 CFTRP13569 1480 aa28.48■■■□□ 2.15
CTNS-209ENST00000574776 FANCD2Q9BXW9 1451 aa28.48■■■□□ 2.15
CTNS-209ENST00000574776 CEP164Q9UPV0 1460 aa28.48■■■□□ 2.15
CTNS-209ENST00000574776 CCDC88BA6NC98 1476 aa28.26■■■□□ 2.11
CTNS-209ENST00000574776 URB2Q14146 1524 aaKnown RBP28.24■■■□□ 2.11
CTNS-209ENST00000574776 PRDM2Q13029 1718 aa28.12■■■□□ 2.09
CTNS-209ENST00000574776 TRIM41Q8WV44 630 aa28.06■■■□□ 2.08
CTNS-209ENST00000574776 OSCARQ8IYS5 282 aa28.05■■■□□ 2.08
CTNS-209ENST00000574776 TOPBP1Q92547 1522 aa27.94■■■□□ 2.06
CTNS-209ENST00000574776 IFT140Q96RY7 1462 aa27.92■■■□□ 2.06
CTNS-209ENST00000574776 ZNF608Q9ULD9 1512 aaPredicted RBP27.91■■■□□ 2.06
CTNS-209ENST00000574776 ABCC8Q09428 1581 aa27.87■■■□□ 2.05
CTNS-209ENST00000574776 DNMBPQ6XZF7 1577 aa27.81■■■□□ 2.04
CTNS-209ENST00000574776 AQRO60306 1485 aaKnown RBP eCLIP27.69■■■□□ 2.02
CTNS-209ENST00000574776 EIF4G3O43432 1585 aaKnown RBP27.69■■■□□ 2.02
CTNS-209ENST00000574776 TARBP1Q13395 1621 aaKnown RBP27.67■■■□□ 2.02
CTNS-209ENST00000574776 POLA1P09884 1462 aaPredicted RBP27.65■■■□□ 2.02
CTNS-209ENST00000574776 RAD54L2Q9Y4B4 1467 aa27.6■■■□□ 2.01
CTNS-209ENST00000574776 SOGA1O94964 1423 aa27.58■■■□□ 2.01
CTNS-209ENST00000574776 SUPT5HO00267 1087 aaKnown RBP27.58■■■□□ 2.01
CTNS-209ENST00000574776 RIMBP3CA6NJZ7 1639 aa27.57■■■□□ 2
CTNS-209ENST00000574776 RIMBP3BA6NNM3 1639 aa27.57■■■□□ 2
CTNS-209ENST00000574776 RIMBP3Q9UFD9 1639 aa27.57■■■□□ 2
CTNS-209ENST00000574776 FBLN2P98095 1184 aa27.56■■■□□ 2
CTNS-209ENST00000574776 TDRD9Q8NDG6 1382 aaKnown RBP27.54■■■□□ 2
CTNS-209ENST00000574776 FGD5Q6ZNL6 1462 aa27.5■■□□□ 1.99
CTNS-209ENST00000574776 ARHGEF11O15085 1522 aa27.49■■□□□ 1.99
CTNS-209ENST00000574776 CHD1O14646 1710 aa27.49■■□□□ 1.99
CTNS-209ENST00000574776 CUX1P39880 1505 aa27.48■■□□□ 1.99
CTNS-209ENST00000574776 CYB5RLQ6IPT4 315 aa27.41■■□□□ 1.98
CTNS-209ENST00000574776 SNAPC4Q5SXM2 1469 aa27.35■■□□□ 1.97
CTNS-209ENST00000574776 CHMP7Q8WUX9 453 aaPredicted RBP27.34■■□□□ 1.97
CTNS-209ENST00000574776 WDR97A6NE52 1622 aa27.33■■□□□ 1.97
CTNS-209ENST00000574776 GRIN2BQ13224 1484 aa27.29■■□□□ 1.96
CTNS-209ENST00000574776 MAGI1Q96QZ7 1491 aaPredicted RBP27.26■■□□□ 1.95
CTNS-209ENST00000574776 ARAP1Q96P48 1450 aa27.23■■□□□ 1.95
CTNS-209ENST00000574776 GAPVD1Q14C86 1478 aa27.22■■□□□ 1.95
CTNS-209ENST00000574776 SYNJ2O15056 1496 aa27.19■■□□□ 1.94
CTNS-209ENST00000574776 ABCA10Q8WWZ4 1543 aa27.17■■□□□ 1.94
CTNS-209ENST00000574776 SYNJ1O43426 1573 aa27.17■■□□□ 1.94
CTNS-209ENST00000574776 CLASP1Q7Z460 1538 aa27.16■■□□□ 1.94
CTNS-209ENST00000574776 PBRM1Q86U86 1689 aa27.14■■□□□ 1.94
CTNS-209ENST00000574776 WRNQ14191 1432 aaPredicted RBP eCLIP27.1■■□□□ 1.93
CTNS-209ENST00000574776 TRHP20396 242 aaPredicted RBP27.1■■□□□ 1.93
CTNS-209ENST00000574776 ABCA5Q8WWZ7 1642 aa27.09■■□□□ 1.93
CTNS-209ENST00000574776 TOP2BQ02880 1626 aa27.02■■□□□ 1.92
CTNS-209ENST00000574776 BIVM-ERCC5R4GMW8 1640 aa27.01■■□□□ 1.91
CTNS-209ENST00000574776 GRIN2AQ12879 1464 aa26.93■■□□□ 1.9
CTNS-209ENST00000574776 ADAMTS12P58397 1594 aa26.88■■□□□ 1.89
CTNS-209ENST00000574776 FHAD1B1AJZ9 1412 aa26.87■■□□□ 1.89
CTNS-209ENST00000574776 NUP160Q12769 1436 aa26.83■■□□□ 1.89
CTNS-209ENST00000574776 CEP170Q5SW79 1584 aa26.83■■□□□ 1.89
CTNS-209ENST00000574776 ERICH3Q5RHP9 1530 aa26.81■■□□□ 1.88
CTNS-209ENST00000574776 ERCC6L2Q5T890 1561 aa26.8■■□□□ 1.88
CTNS-209ENST00000574776 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
CTNS-209ENST00000574776 JPH4Q96JJ6 628 aa26.67■■□□□ 1.86
CTNS-209ENST00000574776 PRG4Q92954 1404 aaPredicted RBP26.63■■□□□ 1.85
CTNS-209ENST00000574776 IGF1RP08069 1367 aa26.58■■□□□ 1.84
CTNS-209ENST00000574776 KIF27Q86VH2 1401 aa26.55■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms