RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 CDC42BPBQ9Y5S2 1711 aa38.2■■■■□ 3.71
LITAF-213ENST00000574701 EFCAB2Q5VUJ9 269 aa38.19■■■■□ 3.7
LITAF-213ENST00000574701 LRRC9Q6ZRR7 1453 aa38.18■■■■□ 3.7
LITAF-213ENST00000574701 ADGRL1O94910 1474 aa38.15■■■■□ 3.7
LITAF-213ENST00000574701 CCNB3Q8WWL7 1395 aa38.14■■■■□ 3.7
LITAF-213ENST00000574701 DENND4BO75064 1496 aaPredicted RBP38.12■■■■□ 3.69
LITAF-213ENST00000574701 ITSN2Q9NZM3 1697 aa38.11■■■■□ 3.69
LITAF-213ENST00000574701 GPATCH8Q9UKJ3 1502 aaKnown RBP38.11■■■■□ 3.69
LITAF-213ENST00000574701 NCOA2Q15596 1464 aa38.09■■■■□ 3.69
LITAF-213ENST00000574701 FRMPD1Q5SYB0 1578 aa38.06■■■■□ 3.68
LITAF-213ENST00000574701 RICTORQ6R327 1708 aa38.06■■■■□ 3.68
LITAF-213ENST00000574701 SCAPERQ9BY12 1400 aa38.04■■■■□ 3.68
LITAF-213ENST00000574701 RAPGEF3O95398 923 aa38.03■■■■□ 3.68
LITAF-213ENST00000574701 KANK4Q5T7N3 995 aaPredicted RBP38.02■■■■□ 3.68
LITAF-213ENST00000574701 ABCC1P33527 1531 aa38■■■■□ 3.67
LITAF-213ENST00000574701 POGZQ7Z3K3 1410 aa37.99■■■■□ 3.67
LITAF-213ENST00000574701 CFDP1Q9UEE9 299 aaPredicted RBP37.99■■■■□ 3.67
LITAF-213ENST00000574701 ZNF777Q9ULD5 760 aaPredicted RBP37.96■■■■□ 3.67
LITAF-213ENST00000574701 SAMD9LQ8IVG5 1584 aa37.96■■■■□ 3.67
LITAF-213ENST00000574701 ZMYM4Q5VZL5 1548 aa37.93■■■■□ 3.66
LITAF-213ENST00000574701 ZNF518AQ6AHZ1 1483 aa37.91■■■■□ 3.66
LITAF-213ENST00000574701 PLEKHH2Q8IVE3 1493 aa37.91■■■■□ 3.66
LITAF-213ENST00000574701 SYCP2Q9BX26 1530 aa37.87■■■■□ 3.65
LITAF-213ENST00000574701 ARHGEF40Q8TER5 1519 aa37.85■■■■□ 3.65
LITAF-213ENST00000574701 ARHGEF12Q9NZN5 1544 aa37.84■■■■□ 3.65
LITAF-213ENST00000574701 KDM5CP41229 1560 aa37.84■■■■□ 3.65
LITAF-213ENST00000574701 MAGI2Q86UL8 1455 aa37.84■■■■□ 3.65
LITAF-213ENST00000574701 ZFYVE16Q7Z3T8 1539 aa37.82■■■■□ 3.65
LITAF-213ENST00000574701 KIAA1107Q9UPP5 1409 aa37.82■■■■□ 3.64
LITAF-213ENST00000574701 MYOM3Q5VTT5 1437 aa37.8■■■■□ 3.64
LITAF-213ENST00000574701 TRAPPC8Q9Y2L5 1435 aa37.79■■■■□ 3.64
LITAF-213ENST00000574701 HECW2Q9P2P5 1572 aa37.78■■■■□ 3.64
LITAF-213ENST00000574701 CAMSAP2Q08AD1 1489 aa37.77■■■■□ 3.64
LITAF-213ENST00000574701 AFAP1Q8N556 730 aa37.76■■■■□ 3.64
LITAF-213ENST00000574701 MIA2Q96PC5 1412 aa37.73■■■■□ 3.63
LITAF-213ENST00000574701 ZNF644Q9H582 1327 aaPredicted RBP37.72■■■■□ 3.63
LITAF-213ENST00000574701 HNRNPMP52272 730 aaKnown RBP eCLIP37.72■■■■□ 3.631e-6■■■□□ 15.6
LITAF-213ENST00000574701 MYT1LQ9UL68 1186 aa37.72■■■■□ 3.63
LITAF-213ENST00000574701 YEATS2Q9ULM3 1422 aa37.71■■■■□ 3.63
LITAF-213ENST00000574701 MLH3Q9UHC1 1453 aa37.69■■■■□ 3.62
LITAF-213ENST00000574701 MBD5Q9P267 1494 aa37.64■■■■□ 3.62
LITAF-213ENST00000574701 CCDC141Q6ZP82 1450 aa37.62■■■■□ 3.61
LITAF-213ENST00000574701 KIDINS220Q9ULH0 1771 aa37.61■■■■□ 3.61
LITAF-213ENST00000574701 PTPN23Q9H3S7 1636 aa37.61■■■■□ 3.61
LITAF-213ENST00000574701 SPAG9O60271 1321 aaKnown RBP37.61■■■■□ 3.61
LITAF-213ENST00000574701 ARHGEF5Q12774 1597 aa37.6■■■■□ 3.61
LITAF-213ENST00000574701 DIP2CQ9Y2E4 1556 aa37.6■■■■□ 3.61
LITAF-213ENST00000574701 ATP10AO60312 1499 aa37.6■■■■□ 3.61
LITAF-213ENST00000574701 ABCA6Q8N139 1617 aa37.6■■■■□ 3.61
LITAF-213ENST00000574701 C9orf84Q5VXU9 1444 aa37.6■■■■□ 3.61
LITAF-213ENST00000574701 FGD6Q6ZV73 1430 aa37.6■■■■□ 3.61
LITAF-213ENST00000574701 INO80Q9ULG1 1556 aaPredicted RBP37.59■■■■□ 3.61
LITAF-213ENST00000574701 ATP7AQ04656 1500 aa37.58■■■■□ 3.61
LITAF-213ENST00000574701 RSPH4AQ5TD94 716 aa37.57■■■■□ 3.6
LITAF-213ENST00000574701 ARID4BQ4LE39 1312 aaPredicted RBP37.56■■■■□ 3.6
LITAF-213ENST00000574701 REREQ9P2R6 1566 aa37.51■■■■□ 3.59
LITAF-213ENST00000574701 TCOF1Q13428 1488 aaKnown RBP37.5■■■■□ 3.59
LITAF-213ENST00000574701 PPARGC1BQ86YN6 1023 aaKnown RBP37.49■■■■□ 3.59
LITAF-213ENST00000574701 SIGLEC1Q9BZZ2 1709 aa37.47■■■■□ 3.59
LITAF-213ENST00000574701 BCORL1Q5H9F3 1711 aa37.47■■■■□ 3.59
LITAF-213ENST00000574701 RTEL1-TNFRSF6BF6WH68 1400 aa37.46■■■■□ 3.59
LITAF-213ENST00000574701 KDM4FA0A1W2PPD8 638 aa37.46■■■■□ 3.59
LITAF-213ENST00000574701 TSPY4P0CV99 314 aa37.43■■■■□ 3.58
LITAF-213ENST00000574701 TSPY10P0CW01 314 aa37.43■■■■□ 3.58
LITAF-213ENST00000574701 ADGBQ8N7X0 1667 aa37.42■■■■□ 3.58
LITAF-213ENST00000574701 MAST1Q9Y2H9 1570 aa37.4■■■■□ 3.58
LITAF-213ENST00000574701 CROCC2H7BZ55 1655 aa37.39■■■■□ 3.58
LITAF-213ENST00000574701 DNMT1P26358 1616 aaKnown RBP37.39■■■■□ 3.58
LITAF-213ENST00000574701 AEBP2Q6ZN18 517 aaPredicted RBP37.38■■■■□ 3.57
LITAF-213ENST00000574701 ADAMTSL3P82987 1691 aa37.37■■■■□ 3.57
LITAF-213ENST00000574701 AGLP35573 1532 aa37.36■■■■□ 3.57
LITAF-213ENST00000574701 A2MP01023 1474 aa37.35■■■■□ 3.57
LITAF-213ENST00000574701 SHANK2Q9UPX8 1470 aa37.34■■■■□ 3.57
LITAF-213ENST00000574701 FAM50AQ14320 339 aaKnown RBP37.34■■■■□ 3.57
LITAF-213ENST00000574701 DAPK1P53355 1430 aa37.33■■■■□ 3.57
LITAF-213ENST00000574701 ABCC5O15440 1437 aa37.32■■■■□ 3.56
LITAF-213ENST00000574701 PLXNC1O60486 1568 aa37.32■■■■□ 3.56
LITAF-213ENST00000574701 MADDQ8WXG6 1647 aa37.31■■■■□ 3.56
LITAF-213ENST00000574701 MLECQ14165 292 aa37.3■■■■□ 3.56
LITAF-213ENST00000574701 FER1L4A9Z1Z3 1794 aa37.26■■■■□ 3.56
LITAF-213ENST00000574701 RIMS1Q86UR5 1692 aaKnown RBP37.23■■■■□ 3.55
LITAF-213ENST00000574701 DHX29Q7Z478 1369 aaKnown RBP37.21■■■■□ 3.55
LITAF-213ENST00000574701 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.16■■■■□ 3.54
LITAF-213ENST00000574701 RRBP1Q9P2E9 1410 aaKnown RBP37.15■■■■□ 3.54
LITAF-213ENST00000574701 PTPRMP28827 1452 aa37.13■■■■□ 3.54
LITAF-213ENST00000574701 DUOX2Q9NRD8 1548 aa37.13■■■■□ 3.53
LITAF-213ENST00000574701 ANKRD30AQ9BXX3 1397 aa37.12■■■■□ 3.53
LITAF-213ENST00000574701 KIF15Q9NS87 1388 aa37.11■■■■□ 3.53
LITAF-213ENST00000574701 CHIC2Q9UKJ5 165 aa37.1■■■■□ 3.53
LITAF-213ENST00000574701 ESF1Q9H501 851 aaKnown RBP37.09■■■■□ 3.53
LITAF-213ENST00000574701 EIF2AK4Q9P2K8 1649 aaKnown RBP37.09■■■■□ 3.53
LITAF-213ENST00000574701 ADGRL2O95490 1459 aa37.08■■■■□ 3.53
LITAF-213ENST00000574701 KIF3BO15066 747 aa37.05■■■■□ 3.52
LITAF-213ENST00000574701 RRP7BPQ9NSQ0 103 aa37.05■■■■□ 3.52
LITAF-213ENST00000574701 GGT6Q6P531 493 aa37.04■■■■□ 3.52
LITAF-213ENST00000574701 CNTLNQ9NXG0 1405 aa37.03■■■■□ 3.52
LITAF-213ENST00000574701 NCOA1Q15788 1441 aa37.02■■■■□ 3.52
LITAF-213ENST00000574701 ERBINQ96RT1 1412 aa37.02■■■■□ 3.52
LITAF-213ENST00000574701 ITGAEP38570 1179 aa36.99■■■■□ 3.51
LITAF-213ENST00000574701 PTPRKQ15262 1439 aa36.98■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms