RNA–Protein interactions for RNA: ENST00000574379.2

NCBP3-203, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 2

Gene NCBP3, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-203ENST00000574379 DENND4BO75064 1496 aaPredicted RBP16.61■□□□□ 0.25
NCBP3-203ENST00000574379 IQSEC2Q5JU85 1478 aa16.59■□□□□ 0.25
NCBP3-203ENST00000574379 MED1Q15648 1581 aaPredicted RBP16.59■□□□□ 0.25
NCBP3-203ENST00000574379 LTBP4Q8N2S1 1624 aa16.59■□□□□ 0.25
NCBP3-203ENST00000574379 PTPRTO14522 1441 aa16.58■□□□□ 0.24
NCBP3-203ENST00000574379 ZFYVE16Q7Z3T8 1539 aa16.58■□□□□ 0.24
NCBP3-203ENST00000574379 SIGLEC1Q9BZZ2 1709 aa16.57■□□□□ 0.24
NCBP3-203ENST00000574379 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
NCBP3-203ENST00000574379 RICTORQ6R327 1708 aa16.55■□□□□ 0.24
NCBP3-203ENST00000574379 ATP10BO94823 1461 aa16.54■□□□□ 0.24
NCBP3-203ENST00000574379 EFCAB5A4FU69 1503 aa16.54■□□□□ 0.24
NCBP3-203ENST00000574379 PIP4K2BP78356 416 aa16.52■□□□□ 0.24
NCBP3-203ENST00000574379 P3H3Q8IVL6 736 aa16.52■□□□□ 0.24
NCBP3-203ENST00000574379 HSPA1LP34931 641 aa16.51■□□□□ 0.23
NCBP3-203ENST00000574379 FHOD3Q2V2M9 1422 aa16.49■□□□□ 0.23
NCBP3-203ENST00000574379 ZNF335Q9H4Z2 1342 aaPredicted RBP16.47■□□□□ 0.23
NCBP3-203ENST00000574379 ARHGEF12Q9NZN5 1544 aa16.47■□□□□ 0.23
NCBP3-203ENST00000574379 SAMD9Q5K651 1589 aa16.46■□□□□ 0.23
NCBP3-203ENST00000574379 ZMYM4Q5VZL5 1548 aa16.45■□□□□ 0.22
NCBP3-203ENST00000574379 ESF1Q9H501 851 aaKnown RBP16.45■□□□□ 0.22
NCBP3-203ENST00000574379 CFAP74Q9C0B2 1584 aa16.45■□□□□ 0.22
NCBP3-203ENST00000574379 MYT1LQ9UL68 1186 aa16.44■□□□□ 0.22
NCBP3-203ENST00000574379 HECW1Q76N89 1606 aa16.44■□□□□ 0.22
NCBP3-203ENST00000574379 MAGI2Q86UL8 1455 aa16.43■□□□□ 0.22
NCBP3-203ENST00000574379 C9orf84Q5VXU9 1444 aa16.41■□□□□ 0.22
NCBP3-203ENST00000574379 NCOA1Q15788 1441 aa16.4■□□□□ 0.22
NCBP3-203ENST00000574379 ATP10AO60312 1499 aa16.4■□□□□ 0.22
NCBP3-203ENST00000574379 SETD1BQ9UPS6 1966 aaKnown RBP16.4■□□□□ 0.22
NCBP3-203ENST00000574379 NCKAP5LQ9HCH0 1330 aa16.4■□□□□ 0.22
NCBP3-203ENST00000574379 PLEKHD1A6NEE1 506 aa16.37■□□□□ 0.21
NCBP3-203ENST00000574379 TOM1O60784 492 aa16.36■□□□□ 0.21
NCBP3-203ENST00000574379 CAMSAP1Q5T5Y3 1602 aa16.36■□□□□ 0.21
NCBP3-203ENST00000574379 SCAPERQ9BY12 1400 aa16.36■□□□□ 0.21
NCBP3-203ENST00000574379 C3P01024 1663 aa16.35■□□□□ 0.21
NCBP3-203ENST00000574379 RAPGEF6Q8TEU7 1601 aa16.34■□□□□ 0.21
NCBP3-203ENST00000574379 EHMT2Q96KQ7 1210 aa16.33■□□□□ 0.2
NCBP3-203ENST00000574379 TRAPPC8Q9Y2L5 1435 aa16.33■□□□□ 0.2
NCBP3-203ENST00000574379 UBTFP17480 764 aaKnown RBP16.32■□□□□ 0.2
NCBP3-203ENST00000574379 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.3■□□□□ 0.2
NCBP3-203ENST00000574379 RANGAP1P46060 587 aaPredicted RBP16.27■□□□□ 0.2
NCBP3-203ENST00000574379 NUP153P49790 1475 aaKnown RBP16.25■□□□□ 0.19
NCBP3-203ENST00000574379 ARHGAP35Q9NRY4 1499 aa16.25■□□□□ 0.19
NCBP3-203ENST00000574379 POTEDQ86YR6 584 aa16.25■□□□□ 0.19
NCBP3-203ENST00000574379 PKD2Q13563 968 aa16.23■□□□□ 0.19
NCBP3-203ENST00000574379 SUPT6HQ7KZ85 1726 aaKnown RBP16.22■□□□□ 0.19
NCBP3-203ENST00000574379 AFAP1Q8N556 730 aa16.2■□□□□ 0.18
NCBP3-203ENST00000574379 MAPK8IP2Q13387 824 aaPredicted RBP16.19■□□□□ 0.18
NCBP3-203ENST00000574379 EFCAB2Q5VUJ9 269 aa16.19■□□□□ 0.18
NCBP3-203ENST00000574379 RGS17Q9UGC6 210 aaPredicted RBP16.19■□□□□ 0.18
NCBP3-203ENST00000574379 PLCH2O75038 1416 aa16.18■□□□□ 0.18
NCBP3-203ENST00000574379 ZNF518AQ6AHZ1 1483 aa16.17■□□□□ 0.18
NCBP3-203ENST00000574379 DIP2CQ9Y2E4 1556 aa16.17■□□□□ 0.18
NCBP3-203ENST00000574379 LRRIQ1Q96JM4 1722 aa16.16■□□□□ 0.18
NCBP3-203ENST00000574379 PTPRKQ15262 1439 aa16.15■□□□□ 0.18
NCBP3-203ENST00000574379 CNTLNQ9NXG0 1405 aa16.15■□□□□ 0.18
NCBP3-203ENST00000574379 CPS1P31327 1500 aa16.14■□□□□ 0.18
NCBP3-203ENST00000574379 FMN1Q68DA7 1419 aa16.14■□□□□ 0.17
NCBP3-203ENST00000574379 PLA2R1Q13018 1463 aa16.14■□□□□ 0.17
NCBP3-203ENST00000574379 NPATQ14207 1427 aa16.13■□□□□ 0.17
NCBP3-203ENST00000574379 CLIP1P30622 1438 aa16.12■□□□□ 0.17
NCBP3-203ENST00000574379 POTEAQ6S8J7 498 aa16.12■□□□□ 0.17
NCBP3-203ENST00000574379 PPP4R3CPQ6ZMV5 832 aa16.12■□□□□ 0.17
NCBP3-203ENST00000574379 ABCA6Q8N139 1617 aa16.12■□□□□ 0.17
NCBP3-203ENST00000574379 AGLP35573 1532 aa16.11■□□□□ 0.17
NCBP3-203ENST00000574379 ATP1B4Q9UN42 357 aaPredicted RBP16.11■□□□□ 0.17
NCBP3-203ENST00000574379 MYO3AQ8NEV4 1616 aa16.11■□□□□ 0.17
NCBP3-203ENST00000574379 ZMYM3Q14202 1370 aa16.11■□□□□ 0.17
NCBP3-203ENST00000574379 MYO5CQ9NQX4 1742 aa16.11■□□□□ 0.17
NCBP3-203ENST00000574379 TCOF1Q13428 1488 aaKnown RBP16.1■□□□□ 0.17
NCBP3-203ENST00000574379 SETD1AO15047 1707 aaKnown RBP16.1■□□□□ 0.17
NCBP3-203ENST00000574379 SHANK2Q9UPX8 1470 aa16.1■□□□□ 0.17
NCBP3-203ENST00000574379 CEP170BQ9Y4F5 1589 aaPredicted RBP16.09■□□□□ 0.17
NCBP3-203ENST00000574379 ARHGAP5Q13017 1502 aa16.09■□□□□ 0.17
NCBP3-203ENST00000574379 REREQ9P2R6 1566 aa16.09■□□□□ 0.17
NCBP3-203ENST00000574379 CEP162Q5TB80 1403 aa16.08■□□□□ 0.16
NCBP3-203ENST00000574379 CDK13Q14004 1512 aaKnown RBP16.08■□□□□ 0.16
NCBP3-203ENST00000574379 KDM5CP41229 1560 aa16.08■□□□□ 0.16
NCBP3-203ENST00000574379 ZNF142P52746 1687 aaPredicted RBP16.07■□□□□ 0.16
NCBP3-203ENST00000574379 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
NCBP3-203ENST00000574379 MROH2AA6NES4 1674 aa16.05■□□□□ 0.16
NCBP3-203ENST00000574379 CASKIN1Q8WXD9 1431 aa16.04■□□□□ 0.16
NCBP3-203ENST00000574379 FYCO1Q9BQS8 1478 aa16.03■□□□□ 0.16
NCBP3-203ENST00000574379 CLTCQ00610 1675 aaKnown RBP16.02■□□□□ 0.16
NCBP3-203ENST00000574379 ALKQ9UM73 1620 aa16.01■□□□□ 0.15
NCBP3-203ENST00000574379 MLH3Q9UHC1 1453 aa16.01■□□□□ 0.15
NCBP3-203ENST00000574379 POLR1AO95602 1720 aaPredicted RBP15.99■□□□□ 0.15
NCBP3-203ENST00000574379 CCDC18Q5T9S5 1454 aa15.98■□□□□ 0.15
NCBP3-203ENST00000574379 GGT6Q6P531 493 aa15.97■□□□□ 0.15
NCBP3-203ENST00000574379 UPF1Q92900 1129 aaKnown RBP eCLIP15.96■□□□□ 0.15
NCBP3-203ENST00000574379 KIF14Q15058 1648 aa15.96■□□□□ 0.15
NCBP3-203ENST00000574379 A2ML1A8K2U0 1454 aa15.96■□□□□ 0.14
NCBP3-203ENST00000574379 DNMT1P26358 1616 aaKnown RBP15.95■□□□□ 0.14
NCBP3-203ENST00000574379 ANKLE2Q86XL3 938 aa15.95■□□□□ 0.14
NCBP3-203ENST00000574379 CDK11AQ9UQ88 783 aaPredicted RBP15.95■□□□□ 0.14
NCBP3-203ENST00000574379 RNF17Q9BXT8 1623 aaKnown RBP15.94■□□□□ 0.14
NCBP3-203ENST00000574379 VWDEQ8N2E2 1590 aa15.94■□□□□ 0.14
NCBP3-203ENST00000574379 NEURL4Q96JN8 1562 aa15.94■□□□□ 0.14
NCBP3-203ENST00000574379 TRIM52Q96A61 297 aa15.93■□□□□ 0.14
NCBP3-203ENST00000574379 KIDINS220Q9ULH0 1771 aa15.92■□□□□ 0.14
NCBP3-203ENST00000574379 TROQ12816 1431 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms