RNA–Protein interactions for RNA: ENST00000573548.1

RNF213-216, Transcript of ring finger protein 213, humanhuman

TSL 2

Gene RNF213, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF213-216ENST00000573548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.26■□□□□ 0.83
RNF213-216ENST00000573548 PHLDB1Q86UU1 1377 aa20.25■□□□□ 0.83
RNF213-216ENST00000573548 FRMPD1Q5SYB0 1578 aa20.24■□□□□ 0.83
RNF213-216ENST00000573548 CFDP1Q9UEE9 299 aaPredicted RBP20.23■□□□□ 0.83
RNF213-216ENST00000573548 MYOM3Q5VTT5 1437 aa20.21■□□□□ 0.83
RNF213-216ENST00000573548 MIA2Q96PC5 1412 aa20.19■□□□□ 0.82
RNF213-216ENST00000573548 FANCAO15360 1455 aa20.19■□□□□ 0.82
RNF213-216ENST00000573548 RICTORQ6R327 1708 aa20.18■□□□□ 0.82
RNF213-216ENST00000573548 MYO5CQ9NQX4 1742 aa20.18■□□□□ 0.82
RNF213-216ENST00000573548 FAM50AQ14320 339 aaKnown RBP20.17■□□□□ 0.82
RNF213-216ENST00000573548 EFCAB2Q5VUJ9 269 aa20.17■□□□□ 0.82
RNF213-216ENST00000573548 ARHGEF40Q8TER5 1519 aa20.16■□□□□ 0.82
RNF213-216ENST00000573548 FGD6Q6ZV73 1430 aa20.15■□□□□ 0.82
RNF213-216ENST00000573548 RRBP1Q9P2E9 1410 aaKnown RBP20.15■□□□□ 0.82
RNF213-216ENST00000573548 GPATCH8Q9UKJ3 1502 aaKnown RBP20.15■□□□□ 0.82
RNF213-216ENST00000573548 ZNF777Q9ULD5 760 aaPredicted RBP20.14■□□□□ 0.81
RNF213-216ENST00000573548 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.13■□□□□ 0.81
RNF213-216ENST00000573548 DENND4BO75064 1496 aaPredicted RBP20.12■□□□□ 0.81
RNF213-216ENST00000573548 PLCH2O75038 1416 aa20.12■□□□□ 0.81
RNF213-216ENST00000573548 AKNAQ7Z591 1439 aa20.12■□□□□ 0.81
RNF213-216ENST00000573548 RAPGEF3O95398 923 aa20.11■□□□□ 0.81
RNF213-216ENST00000573548 ZMYM4Q5VZL5 1548 aa20.11■□□□□ 0.81
RNF213-216ENST00000573548 RSPH4AQ5TD94 716 aa20.09■□□□□ 0.81
RNF213-216ENST00000573548 ITSN2Q9NZM3 1697 aa20.08■□□□□ 0.81
RNF213-216ENST00000573548 PCGF6Q9BYE7 350 aa20.08■□□□□ 0.81
RNF213-216ENST00000573548 ARHGAP5Q13017 1502 aa20.07■□□□□ 0.8
RNF213-216ENST00000573548 PLEKHH2Q8IVE3 1493 aa20.05■□□□□ 0.8
RNF213-216ENST00000573548 ZFYVE16Q7Z3T8 1539 aa20.05■□□□□ 0.8
RNF213-216ENST00000573548 ADAMTSL3P82987 1691 aa20.04■□□□□ 0.8
RNF213-216ENST00000573548 POGZQ7Z3K3 1410 aa20.04■□□□□ 0.8
RNF213-216ENST00000573548 PREX2Q70Z35 1606 aa20.04■□□□□ 0.8
RNF213-216ENST00000573548 BCORL1Q5H9F3 1711 aa20.04■□□□□ 0.8
RNF213-216ENST00000573548 TCOF1Q13428 1488 aaKnown RBP20.03■□□□□ 0.8
RNF213-216ENST00000573548 ITGAEP38570 1179 aa20.02■□□□□ 0.8
RNF213-216ENST00000573548 PTPN23Q9H3S7 1636 aa20.02■□□□□ 0.79
RNF213-216ENST00000573548 TSPY4P0CV99 314 aa20.01■□□□□ 0.79
RNF213-216ENST00000573548 TSPY10P0CW01 314 aa20.01■□□□□ 0.79
RNF213-216ENST00000573548 ZNF644Q9H582 1327 aaPredicted RBP20.01■□□□□ 0.79
RNF213-216ENST00000573548 HECW2Q9P2P5 1572 aa20■□□□□ 0.79
RNF213-216ENST00000573548 CDC42BPBQ9Y5S2 1711 aa20■□□□□ 0.79
RNF213-216ENST00000573548 MADDQ8WXG6 1647 aa20■□□□□ 0.79
RNF213-216ENST00000573548 KIAA1107Q9UPP5 1409 aa20■□□□□ 0.79
RNF213-216ENST00000573548 MAGI2Q86UL8 1455 aa19.99■□□□□ 0.79
RNF213-216ENST00000573548 SCAPERQ9BY12 1400 aa19.99■□□□□ 0.79
RNF213-216ENST00000573548 CDC42BPAQ5VT25 1732 aa19.98■□□□□ 0.79
RNF213-216ENST00000573548 CAMSAP2Q08AD1 1489 aa19.98■□□□□ 0.79
RNF213-216ENST00000573548 YEATS2Q9ULM3 1422 aa19.97■□□□□ 0.79
RNF213-216ENST00000573548 HNRNPMP52272 730 aaKnown RBP eCLIP19.97■□□□□ 0.79
RNF213-216ENST00000573548 SIGLEC1Q9BZZ2 1709 aa19.96■□□□□ 0.79
RNF213-216ENST00000573548 ZNF518AQ6AHZ1 1483 aa19.96■□□□□ 0.79
RNF213-216ENST00000573548 KDM5CP41229 1560 aa19.95■□□□□ 0.78
RNF213-216ENST00000573548 ARID4BQ4LE39 1312 aaPredicted RBP19.95■□□□□ 0.78
RNF213-216ENST00000573548 ABCC1P33527 1531 aa19.94■□□□□ 0.78
RNF213-216ENST00000573548 RIMS1Q86UR5 1692 aaKnown RBP19.94■□□□□ 0.78
RNF213-216ENST00000573548 PTPRMP28827 1452 aa19.93■□□□□ 0.78
RNF213-216ENST00000573548 DAPK1P53355 1430 aa19.9■□□□□ 0.78
RNF213-216ENST00000573548 FER1L4A9Z1Z3 1794 aa19.89■□□□□ 0.77
RNF213-216ENST00000573548 MYT1LQ9UL68 1186 aa19.89■□□□□ 0.77
RNF213-216ENST00000573548 SAMD9LQ8IVG5 1584 aa19.88■□□□□ 0.77
RNF213-216ENST00000573548 CCDC141Q6ZP82 1450 aa19.88■□□□□ 0.77
RNF213-216ENST00000573548 ABCC5O15440 1437 aa19.88■□□□□ 0.77
RNF213-216ENST00000573548 C9orf84Q5VXU9 1444 aa19.88■□□□□ 0.77
RNF213-216ENST00000573548 CHIC2Q9UKJ5 165 aa19.88■□□□□ 0.77
RNF213-216ENST00000573548 ARHGEF5Q12774 1597 aa19.87■□□□□ 0.77
RNF213-216ENST00000573548 MBD5Q9P267 1494 aa19.86■□□□□ 0.77
RNF213-216ENST00000573548 ACIN1Q9UKV3 1341 aaKnown RBP19.86■□□□□ 0.77
RNF213-216ENST00000573548 ABCA6Q8N139 1617 aa19.86■□□□□ 0.77
RNF213-216ENST00000573548 DIP2CQ9Y2E4 1556 aa19.86■□□□□ 0.77
RNF213-216ENST00000573548 ANKRD30AQ9BXX3 1397 aa19.85■□□□□ 0.77
RNF213-216ENST00000573548 SPAG9O60271 1321 aaKnown RBP19.85■□□□□ 0.77
RNF213-216ENST00000573548 SYCP2Q9BX26 1530 aa19.85■□□□□ 0.77
RNF213-216ENST00000573548 ATP10AO60312 1499 aa19.85■□□□□ 0.77
RNF213-216ENST00000573548 ROCK1Q13464 1354 aa19.84■□□□□ 0.77
RNF213-216ENST00000573548 AFAP1Q8N556 730 aa19.84■□□□□ 0.77
RNF213-216ENST00000573548 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
RNF213-216ENST00000573548 SHANK2Q9UPX8 1470 aa19.83■□□□□ 0.76
RNF213-216ENST00000573548 REREQ9P2R6 1566 aa19.83■□□□□ 0.76
RNF213-216ENST00000573548 ARHGEF12Q9NZN5 1544 aa19.82■□□□□ 0.76
RNF213-216ENST00000573548 MLH3Q9UHC1 1453 aa19.8■□□□□ 0.76
RNF213-216ENST00000573548 TRAPPC8Q9Y2L5 1435 aa19.8■□□□□ 0.76
RNF213-216ENST00000573548 RRP7BPQ9NSQ0 103 aa19.8■□□□□ 0.76
RNF213-216ENST00000573548 RTEL1-TNFRSF6BF6WH68 1400 aa19.79■□□□□ 0.76
RNF213-216ENST00000573548 PTPRKQ15262 1439 aa19.79■□□□□ 0.76
RNF213-216ENST00000573548 KIDINS220Q9ULH0 1771 aa19.78■□□□□ 0.76
RNF213-216ENST00000573548 HRCP23327 699 aa19.78■□□□□ 0.76
RNF213-216ENST00000573548 SETD5Q9C0A6 1442 aa19.77■□□□□ 0.76
RNF213-216ENST00000573548 NCOA1Q15788 1441 aa19.76■□□□□ 0.75
RNF213-216ENST00000573548 HFM1A2PYH4 1435 aa19.76■□□□□ 0.75
RNF213-216ENST00000573548 ADGRL2O95490 1459 aa19.75■□□□□ 0.75
RNF213-216ENST00000573548 LMTK3Q96Q04 1460 aa19.74■□□□□ 0.75
RNF213-216ENST00000573548 MLECQ14165 292 aa19.74■□□□□ 0.75
RNF213-216ENST00000573548 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
RNF213-216ENST00000573548 KIF15Q9NS87 1388 aa19.72■□□□□ 0.75
RNF213-216ENST00000573548 MAST1Q9Y2H9 1570 aa19.72■□□□□ 0.75
RNF213-216ENST00000573548 AGLP35573 1532 aa19.71■□□□□ 0.75
RNF213-216ENST00000573548 ATP7AQ04656 1500 aa19.71■□□□□ 0.75
RNF213-216ENST00000573548 NAIPQ13075 1403 aa19.7■□□□□ 0.74
RNF213-216ENST00000573548 CROCC2H7BZ55 1655 aa19.68■□□□□ 0.74
RNF213-216ENST00000573548 PREX1Q8TCU6 1659 aa19.68■□□□□ 0.74
RNF213-216ENST00000573548 RAB3GAP2Q9H2M9 1393 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms