RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 KDM4FA0A1W2PPD8 638 aa32.67■■■□□ 2.82
CHMP6-204ENST00000572778 EHBP1L1Q8N3D4 1523 aa32.66■■■□□ 2.82
CHMP6-204ENST00000572778 PREX2Q70Z35 1606 aa32.65■■■□□ 2.82
CHMP6-204ENST00000572778 CCNB3Q8WWL7 1395 aa32.64■■■□□ 2.82
CHMP6-204ENST00000572778 ZNF777Q9ULD5 760 aaPredicted RBP32.63■■■□□ 2.81
CHMP6-204ENST00000572778 CDC42BPBQ9Y5S2 1711 aa32.63■■■□□ 2.81
CHMP6-204ENST00000572778 TIAM1Q13009 1591 aa32.62■■■□□ 2.81
CHMP6-204ENST00000572778 GPATCH8Q9UKJ3 1502 aaKnown RBP32.62■■■□□ 2.81
CHMP6-204ENST00000572778 POGZQ7Z3K3 1410 aa32.62■■■□□ 2.81
CHMP6-204ENST00000572778 RICTORQ6R327 1708 aa32.62■■■□□ 2.81
CHMP6-204ENST00000572778 CFDP1Q9UEE9 299 aaPredicted RBP32.59■■■□□ 2.81
CHMP6-204ENST00000572778 CDC42BPAQ5VT25 1732 aa32.58■■■□□ 2.81
CHMP6-204ENST00000572778 AFAP1Q8N556 730 aa32.56■■■□□ 2.8
CHMP6-204ENST00000572778 APLP2Q06481 763 aa32.55■■■□□ 2.8
CHMP6-204ENST00000572778 ZMYM4Q5VZL5 1548 aa32.54■■■□□ 2.8
CHMP6-204ENST00000572778 ZNF518AQ6AHZ1 1483 aa32.53■■■□□ 2.8
CHMP6-204ENST00000572778 LRRC9Q6ZRR7 1453 aa32.53■■■□□ 2.8
CHMP6-204ENST00000572778 MAGI2Q86UL8 1455 aa32.51■■■□□ 2.79
CHMP6-204ENST00000572778 KANK4Q5T7N3 995 aaPredicted RBP32.51■■■□□ 2.79
CHMP6-204ENST00000572778 MYT1LQ9UL68 1186 aa32.51■■■□□ 2.79
CHMP6-204ENST00000572778 MAP3K1Q13233 1512 aa32.51■■■□□ 2.79
CHMP6-204ENST00000572778 YEATS2Q9ULM3 1422 aa32.51■■■□□ 2.79
CHMP6-204ENST00000572778 ARID4BQ4LE39 1312 aaPredicted RBP32.51■■■□□ 2.79
CHMP6-204ENST00000572778 ABCC1P33527 1531 aa32.5■■■□□ 2.79
CHMP6-204ENST00000572778 ZFYVE16Q7Z3T8 1539 aa32.5■■■□□ 2.79
CHMP6-204ENST00000572778 NCOA2Q15596 1464 aa32.49■■■□□ 2.79
CHMP6-204ENST00000572778 ARHGEF40Q8TER5 1519 aa32.49■■■□□ 2.79
CHMP6-204ENST00000572778 ARHGEF12Q9NZN5 1544 aa32.49■■■□□ 2.79
CHMP6-204ENST00000572778 TRAPPC8Q9Y2L5 1435 aa32.48■■■□□ 2.79
CHMP6-204ENST00000572778 SUPT6HQ7KZ85 1726 aaKnown RBP32.46■■■□□ 2.79
CHMP6-204ENST00000572778 SAMD9LQ8IVG5 1584 aa32.45■■■□□ 2.79
CHMP6-204ENST00000572778 HNRNPMP52272 730 aaKnown RBP eCLIP32.45■■■□□ 2.79
CHMP6-204ENST00000572778 KDM5CP41229 1560 aa32.41■■■□□ 2.78
CHMP6-204ENST00000572778 ZNF644Q9H582 1327 aaPredicted RBP32.41■■■□□ 2.78
CHMP6-204ENST00000572778 PLEKHH2Q8IVE3 1493 aa32.41■■■□□ 2.78
CHMP6-204ENST00000572778 ITSN2Q9NZM3 1697 aa32.4■■■□□ 2.78
CHMP6-204ENST00000572778 SYCP2Q9BX26 1530 aa32.4■■■□□ 2.78
CHMP6-204ENST00000572778 KIAA1107Q9UPP5 1409 aa32.39■■■□□ 2.78
CHMP6-204ENST00000572778 ATP10AO60312 1499 aa32.37■■■□□ 2.77
CHMP6-204ENST00000572778 MLH3Q9UHC1 1453 aa32.35■■■□□ 2.77
CHMP6-204ENST00000572778 HECW2Q9P2P5 1572 aa32.34■■■□□ 2.77
CHMP6-204ENST00000572778 C9orf84Q5VXU9 1444 aa32.32■■■□□ 2.76
CHMP6-204ENST00000572778 SPAG9O60271 1321 aaKnown RBP32.31■■■□□ 2.76
CHMP6-204ENST00000572778 MLECQ14165 292 aa32.29■■■□□ 2.76
CHMP6-204ENST00000572778 DIP2CQ9Y2E4 1556 aa32.25■■■□□ 2.75
CHMP6-204ENST00000572778 CAMSAP2Q08AD1 1489 aa32.24■■■□□ 2.75
CHMP6-204ENST00000572778 MBD5Q9P267 1494 aa32.24■■■□□ 2.75
CHMP6-204ENST00000572778 BCORL1Q5H9F3 1711 aa32.24■■■□□ 2.75
CHMP6-204ENST00000572778 MYOM3Q5VTT5 1437 aa32.23■■■□□ 2.75
CHMP6-204ENST00000572778 SIGLEC1Q9BZZ2 1709 aa32.23■■■□□ 2.75
CHMP6-204ENST00000572778 ABCA6Q8N139 1617 aa32.22■■■□□ 2.75
CHMP6-204ENST00000572778 ADAMTSL3P82987 1691 aa32.21■■■□□ 2.75
CHMP6-204ENST00000572778 KIDINS220Q9ULH0 1771 aa32.2■■■□□ 2.75
CHMP6-204ENST00000572778 RSPH4AQ5TD94 716 aa32.18■■■□□ 2.74
CHMP6-204ENST00000572778 MIA2Q96PC5 1412 aa32.17■■■□□ 2.74
CHMP6-204ENST00000572778 ATP7AQ04656 1500 aa32.16■■■□□ 2.74
CHMP6-204ENST00000572778 CCDC141Q6ZP82 1450 aa32.15■■■□□ 2.74
CHMP6-204ENST00000572778 MADDQ8WXG6 1647 aa32.15■■■□□ 2.74
CHMP6-204ENST00000572778 REREQ9P2R6 1566 aa32.14■■■□□ 2.74
CHMP6-204ENST00000572778 PTPRMP28827 1452 aa32.13■■■□□ 2.73
CHMP6-204ENST00000572778 INO80Q9ULG1 1556 aaPredicted RBP32.12■■■□□ 2.73
CHMP6-204ENST00000572778 TSPY4P0CV99 314 aa32.1■■■□□ 2.73
CHMP6-204ENST00000572778 TSPY10P0CW01 314 aa32.1■■■□□ 2.73
CHMP6-204ENST00000572778 RTEL1-TNFRSF6BF6WH68 1400 aa32.09■■■□□ 2.73
CHMP6-204ENST00000572778 PLPPR3Q6T4P5 718 aa32.07■■■□□ 2.72
CHMP6-204ENST00000572778 AGLP35573 1532 aa32.06■■■□□ 2.72
CHMP6-204ENST00000572778 ARHGEF5Q12774 1597 aa32.06■■■□□ 2.72
CHMP6-204ENST00000572778 A2MP01023 1474 aa32.05■■■□□ 2.72
CHMP6-204ENST00000572778 RIMS1Q86UR5 1692 aaKnown RBP32.05■■■□□ 2.72
CHMP6-204ENST00000572778 FGD6Q6ZV73 1430 aa32.03■■■□□ 2.72
CHMP6-204ENST00000572778 PPARGC1BQ86YN6 1023 aaKnown RBP32■■■□□ 2.71
CHMP6-204ENST00000572778 ESF1Q9H501 851 aaKnown RBP31.99■■■□□ 2.71
CHMP6-204ENST00000572778 PTPN23Q9H3S7 1636 aa31.98■■■□□ 2.71
CHMP6-204ENST00000572778 FER1L4A9Z1Z3 1794 aa31.96■■■□□ 2.71
CHMP6-204ENST00000572778 DHX29Q7Z478 1369 aaKnown RBP31.95■■■□□ 2.71
CHMP6-204ENST00000572778 PLXNC1O60486 1568 aa31.94■■■□□ 2.7
CHMP6-204ENST00000572778 ADGBQ8N7X0 1667 aa31.93■■■□□ 2.7
CHMP6-204ENST00000572778 GGT6Q6P531 493 aa31.93■■■□□ 2.7
CHMP6-204ENST00000572778 TCOF1Q13428 1488 aaKnown RBP31.92■■■□□ 2.7
CHMP6-204ENST00000572778 CEBPAP49715 358 aaPredicted RBP31.91■■■□□ 2.7
CHMP6-204ENST00000572778 FAM50AQ14320 339 aaKnown RBP31.91■■■□□ 2.7
CHMP6-204ENST00000572778 ABCC5O15440 1437 aa31.89■■■□□ 2.7
CHMP6-204ENST00000572778 MAST1Q9Y2H9 1570 aa31.88■■■□□ 2.69
CHMP6-204ENST00000572778 KIF3BO15066 747 aa31.87■■■□□ 2.69
CHMP6-204ENST00000572778 DAPK1P53355 1430 aa31.85■■■□□ 2.69
CHMP6-204ENST00000572778 CNTLNQ9NXG0 1405 aa31.83■■■□□ 2.69
CHMP6-204ENST00000572778 SHANK2Q9UPX8 1470 aa31.81■■■□□ 2.68
CHMP6-204ENST00000572778 CHIC2Q9UKJ5 165 aa31.81■■■□□ 2.68
CHMP6-204ENST00000572778 DNMT1P26358 1616 aaKnown RBP31.8■■■□□ 2.68
CHMP6-204ENST00000572778 PPP6R1Q9UPN7 881 aa31.79■■■□□ 2.68
CHMP6-204ENST00000572778 RRP7BPQ9NSQ0 103 aa31.78■■■□□ 2.68
CHMP6-204ENST00000572778 CROCC2H7BZ55 1655 aa31.74■■■□□ 2.67
CHMP6-204ENST00000572778 ZMYM3Q14202 1370 aa31.74■■■□□ 2.67
CHMP6-204ENST00000572778 KIF15Q9NS87 1388 aa31.74■■■□□ 2.67
CHMP6-204ENST00000572778 ANKRD30AQ9BXX3 1397 aa31.71■■■□□ 2.67
CHMP6-204ENST00000572778 DUOX2Q9NRD8 1548 aa31.71■■■□□ 2.67
CHMP6-204ENST00000572778 LMTK3Q96Q04 1460 aa31.7■■■□□ 2.66
CHMP6-204ENST00000572778 C3P01024 1663 aa31.7■■■□□ 2.66
CHMP6-204ENST00000572778 CLTCQ00610 1675 aaKnown RBP31.68■■■□□ 2.66
CHMP6-204ENST00000572778 WASHC2CQ9Y4E1 1318 aa31.68■■■□□ 2.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms