RNA–Protein interactions for RNA: ENST00000572724.1

EDC4-205, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 4

Gene EDC4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-205ENST00000572724 POGZQ7Z3K3 1410 aa28.86■■■□□ 2.21
EDC4-205ENST00000572724 ARHGAP5Q13017 1502 aa28.86■■■□□ 2.21
EDC4-205ENST00000572724 ARHGEF40Q8TER5 1519 aa28.85■■■□□ 2.21
EDC4-205ENST00000572724 PREX2Q70Z35 1606 aa28.83■■■□□ 2.21
EDC4-205ENST00000572724 CDC42BPBQ9Y5S2 1711 aa28.83■■■□□ 2.21
EDC4-205ENST00000572724 YEATS2Q9ULM3 1422 aa28.79■■■□□ 2.2
EDC4-205ENST00000572724 MAGI2Q86UL8 1455 aa28.78■■■□□ 2.2
EDC4-205ENST00000572724 ZFYVE16Q7Z3T8 1539 aa28.77■■■□□ 2.2
EDC4-205ENST00000572724 CDC42BPAQ5VT25 1732 aa28.76■■■□□ 2.19
EDC4-205ENST00000572724 GPATCH8Q9UKJ3 1502 aaKnown RBP28.74■■■□□ 2.19
EDC4-205ENST00000572724 MTUS2Q5JR59 1369 aa28.74■■■□□ 2.19
EDC4-205ENST00000572724 ABCC1P33527 1531 aa28.73■■■□□ 2.19
EDC4-205ENST00000572724 ARHGEF12Q9NZN5 1544 aa28.73■■■□□ 2.19
EDC4-205ENST00000572724 ZNF518AQ6AHZ1 1483 aa28.72■■■□□ 2.19
EDC4-205ENST00000572724 KDM5CP41229 1560 aa28.72■■■□□ 2.19
EDC4-205ENST00000572724 VPS8Q8N3P4 1428 aa28.72■■■□□ 2.19
EDC4-205ENST00000572724 ADAMTSL3P82987 1691 aa28.7■■■□□ 2.19
EDC4-205ENST00000572724 EHBP1L1Q8N3D4 1523 aa28.7■■■□□ 2.19
EDC4-205ENST00000572724 AFAP1Q8N556 730 aa28.69■■■□□ 2.18
EDC4-205ENST00000572724 SIGLEC1Q9BZZ2 1709 aa28.69■■■□□ 2.18
EDC4-205ENST00000572724 BCORL1Q5H9F3 1711 aa28.67■■■□□ 2.18
EDC4-205ENST00000572724 TRAPPC8Q9Y2L5 1435 aa28.67■■■□□ 2.18
EDC4-205ENST00000572724 SAMD9LQ8IVG5 1584 aa28.65■■■□□ 2.18
EDC4-205ENST00000572724 ARID4BQ4LE39 1312 aaPredicted RBP28.65■■■□□ 2.18
EDC4-205ENST00000572724 ITSN2Q9NZM3 1697 aa28.64■■■□□ 2.18
EDC4-205ENST00000572724 CCNB3Q8WWL7 1395 aa28.63■■■□□ 2.17
EDC4-205ENST00000572724 TIAM1Q13009 1591 aa28.63■■■□□ 2.17
EDC4-205ENST00000572724 ATP10AO60312 1499 aa28.62■■■□□ 2.17
EDC4-205ENST00000572724 HECW2Q9P2P5 1572 aa28.61■■■□□ 2.17
EDC4-205ENST00000572724 MLH3Q9UHC1 1453 aa28.6■■■□□ 2.17
EDC4-205ENST00000572724 C9orf84Q5VXU9 1444 aa28.6■■■□□ 2.17
EDC4-205ENST00000572724 MADDQ8WXG6 1647 aa28.58■■■□□ 2.17
EDC4-205ENST00000572724 CFDP1Q9UEE9 299 aaPredicted RBP28.58■■■□□ 2.17
EDC4-205ENST00000572724 ZNF777Q9ULD5 760 aaPredicted RBP28.58■■■□□ 2.17
EDC4-205ENST00000572724 PTPRMP28827 1452 aa28.58■■■□□ 2.17
EDC4-205ENST00000572724 SYCP2Q9BX26 1530 aa28.58■■■□□ 2.17
EDC4-205ENST00000572724 DIP2CQ9Y2E4 1556 aa28.57■■■□□ 2.16
EDC4-205ENST00000572724 KIAA1107Q9UPP5 1409 aa28.55■■■□□ 2.16
EDC4-205ENST00000572724 NCOA2Q15596 1464 aa28.54■■■□□ 2.16
EDC4-205ENST00000572724 ABCA6Q8N139 1617 aa28.54■■■□□ 2.16
EDC4-205ENST00000572724 LRRC9Q6ZRR7 1453 aa28.53■■■□□ 2.16
EDC4-205ENST00000572724 PLEKHH2Q8IVE3 1493 aa28.53■■■□□ 2.16
EDC4-205ENST00000572724 MAP3K1Q13233 1512 aa28.52■■■□□ 2.16
EDC4-205ENST00000572724 REREQ9P2R6 1566 aa28.51■■■□□ 2.15
EDC4-205ENST00000572724 HNRNPMP52272 730 aaKnown RBP eCLIP28.51■■■□□ 2.15
EDC4-205ENST00000572724 SUPT6HQ7KZ85 1726 aaKnown RBP28.5■■■□□ 2.15
EDC4-205ENST00000572724 KIDINS220Q9ULH0 1771 aa28.5■■■□□ 2.15
EDC4-205ENST00000572724 ZNF644Q9H582 1327 aaPredicted RBP28.48■■■□□ 2.15
EDC4-205ENST00000572724 MYT1LQ9UL68 1186 aa28.47■■■□□ 2.15
EDC4-205ENST00000572724 RIMS1Q86UR5 1692 aaKnown RBP28.46■■■□□ 2.15
EDC4-205ENST00000572724 MLECQ14165 292 aa28.46■■■□□ 2.15
EDC4-205ENST00000572724 KANK4Q5T7N3 995 aaPredicted RBP28.46■■■□□ 2.15
EDC4-205ENST00000572724 MBD5Q9P267 1494 aa28.45■■■□□ 2.14
EDC4-205ENST00000572724 AGLP35573 1532 aa28.42■■■□□ 2.14
EDC4-205ENST00000572724 SPAG9O60271 1321 aaKnown RBP28.42■■■□□ 2.14
EDC4-205ENST00000572724 INO80Q9ULG1 1556 aaPredicted RBP28.41■■■□□ 2.14
EDC4-205ENST00000572724 ATP7AQ04656 1500 aa28.39■■■□□ 2.14
EDC4-205ENST00000572724 FER1L4A9Z1Z3 1794 aa28.37■■■□□ 2.13
EDC4-205ENST00000572724 CAMSAP2Q08AD1 1489 aa28.37■■■□□ 2.13
EDC4-205ENST00000572724 PLXNC1O60486 1568 aa28.3■■■□□ 2.12
EDC4-205ENST00000572724 CCDC141Q6ZP82 1450 aa28.29■■■□□ 2.12
EDC4-205ENST00000572724 RTEL1-TNFRSF6BF6WH68 1400 aa28.28■■■□□ 2.12
EDC4-205ENST00000572724 A2MP01023 1474 aa28.27■■■□□ 2.12
EDC4-205ENST00000572724 MYOM3Q5VTT5 1437 aa28.27■■■□□ 2.12
EDC4-205ENST00000572724 LMTK3Q96Q04 1460 aa28.27■■■□□ 2.12
EDC4-205ENST00000572724 ARHGEF5Q12774 1597 aa28.25■■■□□ 2.11
EDC4-205ENST00000572724 PLPPR3Q6T4P5 718 aa28.25■■■□□ 2.11
EDC4-205ENST00000572724 MIA2Q96PC5 1412 aa28.25■■■□□ 2.11
EDC4-205ENST00000572724 APLP2Q06481 763 aa28.23■■■□□ 2.11
EDC4-205ENST00000572724 RSPH4AQ5TD94 716 aa28.23■■■□□ 2.11
EDC4-205ENST00000572724 CEBPAP49715 358 aaPredicted RBP28.21■■■□□ 2.11
EDC4-205ENST00000572724 ADGBQ8N7X0 1667 aa28.2■■■□□ 2.11
EDC4-205ENST00000572724 DHX29Q7Z478 1369 aaKnown RBP28.15■■■□□ 2.1
EDC4-205ENST00000572724 CNTLNQ9NXG0 1405 aa28.15■■■□□ 2.1
EDC4-205ENST00000572724 C3P01024 1663 aa28.13■■■□□ 2.09
EDC4-205ENST00000572724 MAST1Q9Y2H9 1570 aa28.11■■■□□ 2.09
EDC4-205ENST00000572724 TSPY4P0CV99 314 aa28.1■■■□□ 2.09
EDC4-205ENST00000572724 TSPY10P0CW01 314 aa28.1■■■□□ 2.09
EDC4-205ENST00000572724 ESF1Q9H501 851 aaKnown RBP28.1■■■□□ 2.09
EDC4-205ENST00000572724 HSPA2P54652 639 aa28.08■■■□□ 2.09
EDC4-205ENST00000572724 FGD6Q6ZV73 1430 aa28.08■■■□□ 2.09
EDC4-205ENST00000572724 PTPN23Q9H3S7 1636 aa28.07■■■□□ 2.08
EDC4-205ENST00000572724 GGT6Q6P531 493 aa28.07■■■□□ 2.08
EDC4-205ENST00000572724 MROH2AA6NES4 1674 aa28.07■■■□□ 2.08
EDC4-205ENST00000572724 PREX1Q8TCU6 1659 aa28.07■■■□□ 2.08
EDC4-205ENST00000572724 TCOF1Q13428 1488 aaKnown RBP28.06■■■□□ 2.08
EDC4-205ENST00000572724 ZMYM3Q14202 1370 aa28.04■■■□□ 2.08
EDC4-205ENST00000572724 CLTCQ00610 1675 aaKnown RBP28.03■■■□□ 2.08
EDC4-205ENST00000572724 ABCC5O15440 1437 aa28.02■■■□□ 2.08
EDC4-205ENST00000572724 PPP6R1Q9UPN7 881 aa28.02■■■□□ 2.08
EDC4-205ENST00000572724 KIF3BO15066 747 aa28■■■□□ 2.07
EDC4-205ENST00000572724 UHRF1BP1Q6BDS2 1440 aa28■■■□□ 2.07
EDC4-205ENST00000572724 SHANK2Q9UPX8 1470 aa27.99■■■□□ 2.07
EDC4-205ENST00000572724 NPATQ14207 1427 aa27.98■■■□□ 2.07
EDC4-205ENST00000572724 DAPK1P53355 1430 aa27.97■■■□□ 2.07
EDC4-205ENST00000572724 CROCC2H7BZ55 1655 aa27.97■■■□□ 2.07
EDC4-205ENST00000572724 DNMT1P26358 1616 aaKnown RBP27.96■■■□□ 2.07
EDC4-205ENST00000572724 SETD1BQ9UPS6 1966 aaKnown RBP27.95■■■□□ 2.07
EDC4-205ENST00000572724 PTPRKQ15262 1439 aa27.94■■■□□ 2.06
EDC4-205ENST00000572724 FAM135AQ9P2D6 1515 aa27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms