RNA–Protein interactions for RNA: ENST00000572724.1

EDC4-205, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 4

Gene EDC4, Length 516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-205ENST00000572724 NISCHQ9Y2I1 1504 aa44.35■■■■■ 4.69
EDC4-205ENST00000572724 CCDC180Q9P1Z9 1646 aa39.52■■■■□ 3.92
EDC4-205ENST00000572724 ABCC9O60706 1549 aa38.99■■■■□ 3.83
EDC4-205ENST00000572724 RB1CC1Q8TDY2 1594 aa37.34■■■■□ 3.57
EDC4-205ENST00000572724 NACADO15069 1562 aa37.24■■■■□ 3.55
EDC4-205ENST00000572724 DCAF8L2P0C7V8 631 aa37.07■■■■□ 3.52
EDC4-205ENST00000572724 MYO15BQ96JP2 1530 aa36.95■■■■□ 3.51
EDC4-205ENST00000572724 ZCCHC6Q5VYS8 1495 aaKnown RBP36.9■■■■□ 3.5
EDC4-205ENST00000572724 DCAF1Q9Y4B6 1507 aa36.69■■■■□ 3.46
EDC4-205ENST00000572724 UNC13AQ9UPW8 1703 aa36.48■■■■□ 3.43
EDC4-205ENST00000572724 PABPN1Q86U42 306 aaKnown RBP eCLIP36.38■■■■□ 3.41
EDC4-205ENST00000572724 BICRAQ9NZM4 1560 aa36.3■■■■□ 3.4
EDC4-205ENST00000572724 DNAJC5BQ9UF47 199 aa36.13■■■■□ 3.37
EDC4-205ENST00000572724 SCRIBQ14160 1630 aa36.05■■■■□ 3.36
EDC4-205ENST00000572724 SHROOM4Q9ULL8 1493 aa35.85■■■■□ 3.33
EDC4-205ENST00000572724 EIF4G1Q04637 1599 aaKnown RBP35.33■■■■□ 3.25
EDC4-205ENST00000572724 CC2D2AQ9P2K1 1620 aa35.24■■■■□ 3.23
EDC4-205ENST00000572724 CECR2Q9BXF3 1484 aa35.06■■■■□ 3.2
EDC4-205ENST00000572724 SMARCA4P51532 1647 aa34.47■■■■□ 3.11
EDC4-205ENST00000572724 NCAPD3P42695 1498 aa34.4■■■■□ 3.1
EDC4-205ENST00000572724 ATAD2BQ9ULI0 1458 aa34.38■■■■□ 3.09
EDC4-205ENST00000572724 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
EDC4-205ENST00000572724 SMARCA2P51531 1590 aa34.28■■■■□ 3.08
EDC4-205ENST00000572724 HMGXB3Q12766 1538 aa34.2■■■■□ 3.06
EDC4-205ENST00000572724 MROH2BQ7Z745 1585 aa34.19■■■■□ 3.06
EDC4-205ENST00000572724 PEG3Q9GZU2 1588 aa34.16■■■■□ 3.06
EDC4-205ENST00000572724 BAZ1BQ9UIG0 1483 aaKnown RBP34.03■■■■□ 3.04
EDC4-205ENST00000572724 WIZO95785 1651 aa33.77■■■■□ 3
EDC4-205ENST00000572724 RSF1Q96T23 1441 aaPredicted RBP33.7■■■□□ 2.98
EDC4-205ENST00000572724 NESP48681 1621 aa33.68■■■□□ 2.98
EDC4-205ENST00000572724 ERCC6Q03468 1493 aa33.57■■■□□ 2.97
EDC4-205ENST00000572724 LAMC3Q9Y6N6 1575 aa33.5■■■□□ 2.95
EDC4-205ENST00000572724 TOP2AP11388 1531 aaKnown RBP33.41■■■□□ 2.94
EDC4-205ENST00000572724 CUX2O14529 1486 aa33.37■■■□□ 2.93
EDC4-205ENST00000572724 CADPSQ9ULU8 1353 aa33.36■■■□□ 2.93
EDC4-205ENST00000572724 PDS5BQ9NTI5 1447 aa33.28■■■□□ 2.92
EDC4-205ENST00000572724 THOC2Q8NI27 1593 aaKnown RBP33.22■■■□□ 2.91
EDC4-205ENST00000572724 KIF21AQ7Z4S6 1674 aa33.21■■■□□ 2.91
EDC4-205ENST00000572724 CFTRP13569 1480 aa33.12■■■□□ 2.89
EDC4-205ENST00000572724 CCDC88BA6NC98 1476 aa33.02■■■□□ 2.88
EDC4-205ENST00000572724 FANCD2Q9BXW9 1451 aa32.98■■■□□ 2.87
EDC4-205ENST00000572724 MRC2Q9UBG0 1479 aa32.98■■■□□ 2.87
EDC4-205ENST00000572724 CEP164Q9UPV0 1460 aa32.94■■■□□ 2.86
EDC4-205ENST00000572724 WDR62O43379 1518 aa32.91■■■□□ 2.86
EDC4-205ENST00000572724 PRDM2Q13029 1718 aa32.74■■■□□ 2.83
EDC4-205ENST00000572724 DNAJC5Q9H3Z4 198 aa32.71■■■□□ 2.83
EDC4-205ENST00000572724 URB2Q14146 1524 aaKnown RBP32.7■■■□□ 2.83
EDC4-205ENST00000572724 SUPT5HO00267 1087 aaKnown RBP32.52■■■□□ 2.8
EDC4-205ENST00000572724 TOPBP1Q92547 1522 aa32.43■■■□□ 2.78
EDC4-205ENST00000572724 ABCC8Q09428 1581 aa32.35■■■□□ 2.77
EDC4-205ENST00000572724 DNMBPQ6XZF7 1577 aa32.35■■■□□ 2.77
EDC4-205ENST00000572724 IFT140Q96RY7 1462 aa32.28■■■□□ 2.76
EDC4-205ENST00000572724 ZNF608Q9ULD9 1512 aaPredicted RBP32.21■■■□□ 2.75
EDC4-205ENST00000572724 POLA1P09884 1462 aaPredicted RBP32.15■■■□□ 2.74
EDC4-205ENST00000572724 TARBP1Q13395 1621 aaKnown RBP32.11■■■□□ 2.73
EDC4-205ENST00000572724 CUX1P39880 1505 aa32.09■■■□□ 2.73
EDC4-205ENST00000572724 EIF4G3O43432 1585 aaKnown RBP32.02■■■□□ 2.72
EDC4-205ENST00000572724 FGD5Q6ZNL6 1462 aa32.01■■■□□ 2.71
EDC4-205ENST00000572724 RAD54L2Q9Y4B4 1467 aa32.01■■■□□ 2.71
EDC4-205ENST00000572724 SOGA1O94964 1423 aa31.97■■■□□ 2.71
EDC4-205ENST00000572724 AQRO60306 1485 aaKnown RBP eCLIP31.96■■■□□ 2.71
EDC4-205ENST00000572724 OSCARQ8IYS5 282 aa31.9■■■□□ 2.7
EDC4-205ENST00000572724 TDRD9Q8NDG6 1382 aaKnown RBP31.85■■■□□ 2.69
EDC4-205ENST00000572724 WDR97A6NE52 1622 aa31.78■■■□□ 2.68
EDC4-205ENST00000572724 WRNQ14191 1432 aaPredicted RBP eCLIP31.75■■■□□ 2.67
EDC4-205ENST00000572724 TOP2BQ02880 1626 aa31.71■■■□□ 2.67
EDC4-205ENST00000572724 SYNJ1O43426 1573 aa31.7■■■□□ 2.67
EDC4-205ENST00000572724 BIVM-ERCC5R4GMW8 1640 aa31.7■■■□□ 2.66
EDC4-205ENST00000572724 ABCA10Q8WWZ4 1543 aa31.7■■■□□ 2.66
EDC4-205ENST00000572724 SNAPC4Q5SXM2 1469 aa31.65■■■□□ 2.66
EDC4-205ENST00000572724 CHD1O14646 1710 aa31.64■■■□□ 2.66
EDC4-205ENST00000572724 GRIN2BQ13224 1484 aa31.64■■■□□ 2.66
EDC4-205ENST00000572724 GAPVD1Q14C86 1478 aa31.6■■■□□ 2.65
EDC4-205ENST00000572724 ABCA5Q8WWZ7 1642 aa31.6■■■□□ 2.65
EDC4-205ENST00000572724 MAGI1Q96QZ7 1491 aaPredicted RBP31.59■■■□□ 2.65
EDC4-205ENST00000572724 FBLN2P98095 1184 aa31.55■■■□□ 2.64
EDC4-205ENST00000572724 PBRM1Q86U86 1689 aa31.51■■■□□ 2.64
EDC4-205ENST00000572724 SYNJ2O15056 1496 aa31.47■■■□□ 2.63
EDC4-205ENST00000572724 RIMBP3CA6NJZ7 1639 aa31.46■■■□□ 2.63
EDC4-205ENST00000572724 RIMBP3BA6NNM3 1639 aa31.46■■■□□ 2.63
EDC4-205ENST00000572724 RIMBP3Q9UFD9 1639 aa31.46■■■□□ 2.63
EDC4-205ENST00000572724 TRIM41Q8WV44 630 aa31.45■■■□□ 2.63
EDC4-205ENST00000572724 ARHGEF11O15085 1522 aa31.44■■■□□ 2.62
EDC4-205ENST00000572724 CHMP7Q8WUX9 453 aaPredicted RBP31.43■■■□□ 2.62
EDC4-205ENST00000572724 CLASP1Q7Z460 1538 aa31.37■■■□□ 2.61
EDC4-205ENST00000572724 ADAMTS12P58397 1594 aa31.3■■■□□ 2.6
EDC4-205ENST00000572724 ERICH3Q5RHP9 1530 aa31.28■■■□□ 2.6
EDC4-205ENST00000572724 GRIN2AQ12879 1464 aa31.25■■■□□ 2.59
EDC4-205ENST00000572724 FHAD1B1AJZ9 1412 aa31.23■■■□□ 2.59
EDC4-205ENST00000572724 ARAP1Q96P48 1450 aa31.19■■■□□ 2.58
EDC4-205ENST00000572724 NUP160Q12769 1436 aa31.15■■■□□ 2.58
EDC4-205ENST00000572724 CYB5RLQ6IPT4 315 aa31.12■■■□□ 2.57
EDC4-205ENST00000572724 CEP170Q5SW79 1584 aa31.12■■■□□ 2.57
EDC4-205ENST00000572724 KIF27Q86VH2 1401 aa31.08■■■□□ 2.57
EDC4-205ENST00000572724 IGF1RP08069 1367 aa31.04■■■□□ 2.56
EDC4-205ENST00000572724 SHROOM2Q13796 1616 aa30.93■■■□□ 2.54
EDC4-205ENST00000572724 ERCC6L2Q5T890 1561 aa30.92■■■□□ 2.54
EDC4-205ENST00000572724 CUL7Q14999 1698 aa30.9■■■□□ 2.54
EDC4-205ENST00000572724 RUSC2Q8N2Y8 1516 aa30.86■■■□□ 2.53
EDC4-205ENST00000572724 CARMIL1Q5VZK9 1371 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms