RNA–Protein interactions for RNA: ENST00000572116.1

ATP2A3-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 1 (best)

Gene ATP2A3, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-210ENST00000572116 PLCH2O75038 1416 aa18.18■□□□□ 0.5
ATP2A3-210ENST00000572116 NCOA2Q15596 1464 aa18.15■□□□□ 0.5
ATP2A3-210ENST00000572116 KANK4Q5T7N3 995 aaPredicted RBP18.13■□□□□ 0.49
ATP2A3-210ENST00000572116 CCNB3Q8WWL7 1395 aa18.13■□□□□ 0.49
ATP2A3-210ENST00000572116 PHLDB1Q86UU1 1377 aa18.12■□□□□ 0.49
ATP2A3-210ENST00000572116 AKNAQ7Z591 1439 aa18.12■□□□□ 0.49
ATP2A3-210ENST00000572116 GPATCH8Q9UKJ3 1502 aaKnown RBP18.12■□□□□ 0.49
ATP2A3-210ENST00000572116 FRMPD1Q5SYB0 1578 aa18.12■□□□□ 0.49
ATP2A3-210ENST00000572116 SAMD9LQ8IVG5 1584 aa18.12■□□□□ 0.49
ATP2A3-210ENST00000572116 COL17A1Q9UMD9 1497 aaPredicted RBP18.11■□□□□ 0.49
ATP2A3-210ENST00000572116 ABCC1P33527 1531 aa18.09■□□□□ 0.49
ATP2A3-210ENST00000572116 ADGRL1O94910 1474 aa18.09■□□□□ 0.49
ATP2A3-210ENST00000572116 EFCAB2Q5VUJ9 269 aa18.08■□□□□ 0.48
ATP2A3-210ENST00000572116 DENND4BO75064 1496 aaPredicted RBP18.05■□□□□ 0.48
ATP2A3-210ENST00000572116 SYCP2Q9BX26 1530 aa18.04■□□□□ 0.48
ATP2A3-210ENST00000572116 SCAPERQ9BY12 1400 aa18.03■□□□□ 0.48
ATP2A3-210ENST00000572116 CFDP1Q9UEE9 299 aaPredicted RBP18.02■□□□□ 0.48
ATP2A3-210ENST00000572116 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
ATP2A3-210ENST00000572116 ZMYM4Q5VZL5 1548 aa18.02■□□□□ 0.47
ATP2A3-210ENST00000572116 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
ATP2A3-210ENST00000572116 POGZQ7Z3K3 1410 aa18.01■□□□□ 0.47
ATP2A3-210ENST00000572116 PTPN23Q9H3S7 1636 aa18.01■□□□□ 0.47
ATP2A3-210ENST00000572116 CAMSAP2Q08AD1 1489 aa18.01■□□□□ 0.47
ATP2A3-210ENST00000572116 KDM5CP41229 1560 aa18■□□□□ 0.47
ATP2A3-210ENST00000572116 ARHGEF12Q9NZN5 1544 aa18■□□□□ 0.47
ATP2A3-210ENST00000572116 PLEKHH2Q8IVE3 1493 aa18■□□□□ 0.47
ATP2A3-210ENST00000572116 HECW2Q9P2P5 1572 aa18■□□□□ 0.47
ATP2A3-210ENST00000572116 RAPGEF3O95398 923 aa17.99■□□□□ 0.47
ATP2A3-210ENST00000572116 ZNF518AQ6AHZ1 1483 aa17.99■□□□□ 0.47
ATP2A3-210ENST00000572116 CROCC2H7BZ55 1655 aa17.99■□□□□ 0.47
ATP2A3-210ENST00000572116 KIDINS220Q9ULH0 1771 aa17.98■□□□□ 0.47
ATP2A3-210ENST00000572116 ARHGEF40Q8TER5 1519 aa17.98■□□□□ 0.47
ATP2A3-210ENST00000572116 ZFYVE16Q7Z3T8 1539 aa17.95■□□□□ 0.46
ATP2A3-210ENST00000572116 PPARGC1BQ86YN6 1023 aaKnown RBP17.95■□□□□ 0.46
ATP2A3-210ENST00000572116 MIA2Q96PC5 1412 aa17.95■□□□□ 0.46
ATP2A3-210ENST00000572116 TRAPPC8Q9Y2L5 1435 aa17.95■□□□□ 0.46
ATP2A3-210ENST00000572116 ARHGEF5Q12774 1597 aa17.95■□□□□ 0.46
ATP2A3-210ENST00000572116 KIAA1107Q9UPP5 1409 aa17.94■□□□□ 0.46
ATP2A3-210ENST00000572116 INO80Q9ULG1 1556 aaPredicted RBP17.94■□□□□ 0.46
ATP2A3-210ENST00000572116 ZNF644Q9H582 1327 aaPredicted RBP17.94■□□□□ 0.46
ATP2A3-210ENST00000572116 ABCA6Q8N139 1617 aa17.94■□□□□ 0.46
ATP2A3-210ENST00000572116 ADGBQ8N7X0 1667 aa17.93■□□□□ 0.46
ATP2A3-210ENST00000572116 FGD6Q6ZV73 1430 aa17.92■□□□□ 0.46
ATP2A3-210ENST00000572116 SIGLEC1Q9BZZ2 1709 aa17.92■□□□□ 0.46
ATP2A3-210ENST00000572116 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
ATP2A3-210ENST00000572116 HNRNPMP52272 730 aaKnown RBP eCLIP17.91■□□□□ 0.46
ATP2A3-210ENST00000572116 DNMT1P26358 1616 aaKnown RBP17.9■□□□□ 0.46
ATP2A3-210ENST00000572116 MBD5Q9P267 1494 aa17.9■□□□□ 0.46
ATP2A3-210ENST00000572116 DIP2CQ9Y2E4 1556 aa17.9■□□□□ 0.46
ATP2A3-210ENST00000572116 TCOF1Q13428 1488 aaKnown RBP17.89■□□□□ 0.45
ATP2A3-210ENST00000572116 CCDC141Q6ZP82 1450 aa17.89■□□□□ 0.45
ATP2A3-210ENST00000572116 ATP7AQ04656 1500 aa17.89■□□□□ 0.45
ATP2A3-210ENST00000572116 AFAP1Q8N556 730 aa17.89■□□□□ 0.45
ATP2A3-210ENST00000572116 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
ATP2A3-210ENST00000572116 YEATS2Q9ULM3 1422 aa17.87■□□□□ 0.45
ATP2A3-210ENST00000572116 MAST1Q9Y2H9 1570 aa17.86■□□□□ 0.45
ATP2A3-210ENST00000572116 MYT1LQ9UL68 1186 aa17.85■□□□□ 0.45
ATP2A3-210ENST00000572116 BCORL1Q5H9F3 1711 aa17.84■□□□□ 0.45
ATP2A3-210ENST00000572116 REREQ9P2R6 1566 aa17.83■□□□□ 0.44
ATP2A3-210ENST00000572116 SPAG9O60271 1321 aaKnown RBP17.82■□□□□ 0.44
ATP2A3-210ENST00000572116 ATP10AO60312 1499 aa17.82■□□□□ 0.44
ATP2A3-210ENST00000572116 PLXNC1O60486 1568 aa17.81■□□□□ 0.44
ATP2A3-210ENST00000572116 FER1L4A9Z1Z3 1794 aa17.81■□□□□ 0.44
ATP2A3-210ENST00000572116 RSPH4AQ5TD94 716 aa17.8■□□□□ 0.44
ATP2A3-210ENST00000572116 C9orf84Q5VXU9 1444 aa17.8■□□□□ 0.44
ATP2A3-210ENST00000572116 RTEL1-TNFRSF6BF6WH68 1400 aa17.79■□□□□ 0.44
ATP2A3-210ENST00000572116 DAPK1P53355 1430 aa17.79■□□□□ 0.44
ATP2A3-210ENST00000572116 SHANK2Q9UPX8 1470 aa17.78■□□□□ 0.44
ATP2A3-210ENST00000572116 FAM50AQ14320 339 aaKnown RBP17.78■□□□□ 0.44
ATP2A3-210ENST00000572116 ADAMTSL3P82987 1691 aa17.77■□□□□ 0.43
ATP2A3-210ENST00000572116 ABCC5O15440 1437 aa17.76■□□□□ 0.43
ATP2A3-210ENST00000572116 TSPY4P0CV99 314 aa17.75■□□□□ 0.43
ATP2A3-210ENST00000572116 TSPY10P0CW01 314 aa17.75■□□□□ 0.43
ATP2A3-210ENST00000572116 RRBP1Q9P2E9 1410 aaKnown RBP17.74■□□□□ 0.43
ATP2A3-210ENST00000572116 RIMS1Q86UR5 1692 aaKnown RBP17.74■□□□□ 0.43
ATP2A3-210ENST00000572116 MADDQ8WXG6 1647 aa17.73■□□□□ 0.43
ATP2A3-210ENST00000572116 A2MP01023 1474 aa17.73■□□□□ 0.43
ATP2A3-210ENST00000572116 ARID4BQ4LE39 1312 aaPredicted RBP17.72■□□□□ 0.43
ATP2A3-210ENST00000572116 AGLP35573 1532 aa17.72■□□□□ 0.43
ATP2A3-210ENST00000572116 EIF2AK4Q9P2K8 1649 aaKnown RBP17.72■□□□□ 0.43
ATP2A3-210ENST00000572116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.71■□□□□ 0.43
ATP2A3-210ENST00000572116 DUOX2Q9NRD8 1548 aa17.68■□□□□ 0.42
ATP2A3-210ENST00000572116 ADGRL2O95490 1459 aa17.68■□□□□ 0.42
ATP2A3-210ENST00000572116 CLTCQ00610 1675 aaKnown RBP17.67■□□□□ 0.42
ATP2A3-210ENST00000572116 RNF17Q9BXT8 1623 aaKnown RBP17.66■□□□□ 0.42
ATP2A3-210ENST00000572116 CHIC2Q9UKJ5 165 aa17.66■□□□□ 0.42
ATP2A3-210ENST00000572116 GCC2Q8IWJ2 1684 aa17.66■□□□□ 0.42
ATP2A3-210ENST00000572116 CFAP65Q6ZU64 1925 aaKnown RBP17.65■□□□□ 0.42
ATP2A3-210ENST00000572116 CEP152O94986 1710 aa17.65■□□□□ 0.42
ATP2A3-210ENST00000572116 DHX29Q7Z478 1369 aaKnown RBP17.65■□□□□ 0.42
ATP2A3-210ENST00000572116 ANKRD30AQ9BXX3 1397 aa17.65■□□□□ 0.42
ATP2A3-210ENST00000572116 MROH2AA6NES4 1674 aa17.64■□□□□ 0.42
ATP2A3-210ENST00000572116 PTPRKQ15262 1439 aa17.64■□□□□ 0.42
ATP2A3-210ENST00000572116 ITGAEP38570 1179 aa17.64■□□□□ 0.41
ATP2A3-210ENST00000572116 KIF15Q9NS87 1388 aa17.64■□□□□ 0.41
ATP2A3-210ENST00000572116 KDM4FA0A1W2PPD8 638 aa17.63■□□□□ 0.41
ATP2A3-210ENST00000572116 MLECQ14165 292 aa17.63■□□□□ 0.41
ATP2A3-210ENST00000572116 DEPDC5O75140 1603 aa17.62■□□□□ 0.41
ATP2A3-210ENST00000572116 C3P01024 1663 aa17.62■□□□□ 0.41
ATP2A3-210ENST00000572116 NCOA1Q15788 1441 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms