RNA–Protein interactions for RNA: ENST00000571484.1

CBX2-203, Transcript of chromobox 2, humanhuman

TSL 1 (best)

Gene CBX2, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX2-203ENST00000571484 KIF14Q15058 1648 aa31.48■■■□□ 2.63
CBX2-203ENST00000571484 MADDQ8WXG6 1647 aa31.48■■■□□ 2.63
CBX2-203ENST00000571484 CLIP1P30622 1438 aa31.47■■■□□ 2.63
CBX2-203ENST00000571484 MYO5CQ9NQX4 1742 aa31.44■■■□□ 2.62
CBX2-203ENST00000571484 CASKIN1Q8WXD9 1431 aa31.43■■■□□ 2.62
CBX2-203ENST00000571484 ILDR1Q86SU0 546 aaPredicted RBP31.43■■■□□ 2.62
CBX2-203ENST00000571484 LRRIQ1Q96JM4 1722 aa31.43■■■□□ 2.62
CBX2-203ENST00000571484 PCF11O94913 1555 aaKnown RBP31.39■■■□□ 2.62
CBX2-203ENST00000571484 ARHGAP5Q13017 1502 aa31.38■■■□□ 2.61
CBX2-203ENST00000571484 SIGLEC1Q9BZZ2 1709 aa31.38■■■□□ 2.61
CBX2-203ENST00000571484 CCDC18Q5T9S5 1454 aa31.37■■■□□ 2.61
CBX2-203ENST00000571484 RIMS1Q86UR5 1692 aaKnown RBP31.35■■■□□ 2.61
CBX2-203ENST00000571484 MLECQ14165 292 aa31.34■■■□□ 2.61
CBX2-203ENST00000571484 ATP10AO60312 1499 aa31.33■■■□□ 2.61
CBX2-203ENST00000571484 AFAP1Q8N556 730 aa31.32■■■□□ 2.6
CBX2-203ENST00000571484 ZNF518AQ6AHZ1 1483 aa31.32■■■□□ 2.6
CBX2-203ENST00000571484 FYCO1Q9BQS8 1478 aa31.29■■■□□ 2.6
CBX2-203ENST00000571484 C9orf84Q5VXU9 1444 aa31.29■■■□□ 2.6
CBX2-203ENST00000571484 PLPPR3Q6T4P5 718 aa31.28■■■□□ 2.6
CBX2-203ENST00000571484 LMTK3Q96Q04 1460 aa31.27■■■□□ 2.6
CBX2-203ENST00000571484 KDM5CP41229 1560 aa31.25■■■□□ 2.59
CBX2-203ENST00000571484 CDC42BPBQ9Y5S2 1711 aa31.24■■■□□ 2.59
CBX2-203ENST00000571484 MYT1LQ9UL68 1186 aa31.22■■■□□ 2.59
CBX2-203ENST00000571484 PREX2Q70Z35 1606 aa31.21■■■□□ 2.59
CBX2-203ENST00000571484 ARHGEF12Q9NZN5 1544 aa31.19■■■□□ 2.58
CBX2-203ENST00000571484 TRAPPC8Q9Y2L5 1435 aa31.18■■■□□ 2.58
CBX2-203ENST00000571484 ABCC1P33527 1531 aa31.17■■■□□ 2.58
CBX2-203ENST00000571484 FER1L4A9Z1Z3 1794 aa31.17■■■□□ 2.58
CBX2-203ENST00000571484 MLH3Q9UHC1 1453 aa31.16■■■□□ 2.58
CBX2-203ENST00000571484 HSPA2P54652 639 aa31.14■■■□□ 2.58
CBX2-203ENST00000571484 DIP2CQ9Y2E4 1556 aa31.13■■■□□ 2.57
CBX2-203ENST00000571484 CDC42BPAQ5VT25 1732 aa31.11■■■□□ 2.57
CBX2-203ENST00000571484 ZNF777Q9ULD5 760 aaPredicted RBP31.09■■■□□ 2.57
CBX2-203ENST00000571484 GPATCH8Q9UKJ3 1502 aaKnown RBP31.08■■■□□ 2.57
CBX2-203ENST00000571484 ITSN2Q9NZM3 1697 aa31.08■■■□□ 2.57
CBX2-203ENST00000571484 ABCA6Q8N139 1617 aa31.08■■■□□ 2.57
CBX2-203ENST00000571484 REREQ9P2R6 1566 aa31.08■■■□□ 2.57
CBX2-203ENST00000571484 CEBPAP49715 358 aaPredicted RBP31.07■■■□□ 2.56
CBX2-203ENST00000571484 MTUS2Q5JR59 1369 aa31.02■■■□□ 2.56
CBX2-203ENST00000571484 SAMD9LQ8IVG5 1584 aa31.01■■■□□ 2.56
CBX2-203ENST00000571484 AGLP35573 1532 aa31■■■□□ 2.55
CBX2-203ENST00000571484 HNRNPMP52272 730 aaKnown RBP eCLIP31■■■□□ 2.55
CBX2-203ENST00000571484 CFDP1Q9UEE9 299 aaPredicted RBP31■■■□□ 2.55
CBX2-203ENST00000571484 FBXO41Q8TF61 875 aa30.99■■■□□ 2.55
CBX2-203ENST00000571484 CCNB3Q8WWL7 1395 aa30.99■■■□□ 2.55
CBX2-203ENST00000571484 KIDINS220Q9ULH0 1771 aa30.99■■■□□ 2.55
CBX2-203ENST00000571484 SYCP2Q9BX26 1530 aa30.98■■■□□ 2.55
CBX2-203ENST00000571484 CEP162Q5TB80 1403 aa30.97■■■□□ 2.55
CBX2-203ENST00000571484 SPAG9O60271 1321 aaKnown RBP30.96■■■□□ 2.55
CBX2-203ENST00000571484 KIAA1107Q9UPP5 1409 aa30.95■■■□□ 2.54
CBX2-203ENST00000571484 ESF1Q9H501 851 aaKnown RBP30.92■■■□□ 2.54
CBX2-203ENST00000571484 PLEKHH2Q8IVE3 1493 aa30.92■■■□□ 2.54
CBX2-203ENST00000571484 PREX1Q8TCU6 1659 aa30.9■■■□□ 2.54
CBX2-203ENST00000571484 UHRF1BP1Q6BDS2 1440 aa30.87■■■□□ 2.53
CBX2-203ENST00000571484 EHBP1L1Q8N3D4 1523 aa30.86■■■□□ 2.53
CBX2-203ENST00000571484 ZNF644Q9H582 1327 aaPredicted RBP30.84■■■□□ 2.53
CBX2-203ENST00000571484 TIAM1Q13009 1591 aa30.83■■■□□ 2.53
CBX2-203ENST00000571484 ATP7AQ04656 1500 aa30.83■■■□□ 2.53
CBX2-203ENST00000571484 CNTLNQ9NXG0 1405 aa30.83■■■□□ 2.53
CBX2-203ENST00000571484 C3P01024 1663 aa30.83■■■□□ 2.53
CBX2-203ENST00000571484 SETD1BQ9UPS6 1966 aaKnown RBP30.82■■■□□ 2.52
CBX2-203ENST00000571484 INO80Q9ULG1 1556 aaPredicted RBP30.79■■■□□ 2.52
CBX2-203ENST00000571484 A2MP01023 1474 aa30.78■■■□□ 2.52
CBX2-203ENST00000571484 MBD5Q9P267 1494 aa30.76■■■□□ 2.51
CBX2-203ENST00000571484 LOC105371045A0A1W2PR82 267 aa30.75■■■□□ 2.51
CBX2-203ENST00000571484 SUPT6HQ7KZ85 1726 aaKnown RBP30.75■■■□□ 2.51
CBX2-203ENST00000571484 PLXNC1O60486 1568 aa30.75■■■□□ 2.51
CBX2-203ENST00000571484 CERKQ8TCT0 537 aa30.73■■■□□ 2.51
CBX2-203ENST00000571484 DMRT2Q9Y5R5 561 aa30.73■■■□□ 2.51
CBX2-203ENST00000571484 ZMYM3Q14202 1370 aa30.73■■■□□ 2.51
CBX2-203ENST00000571484 STRCQ7RTU9 1775 aa30.71■■■□□ 2.51
CBX2-203ENST00000571484 NCOA2Q15596 1464 aa30.7■■■□□ 2.51
CBX2-203ENST00000571484 GGT6Q6P531 493 aa30.69■■■□□ 2.5
CBX2-203ENST00000571484 NPATQ14207 1427 aa30.68■■■□□ 2.5
CBX2-203ENST00000571484 MROH2AA6NES4 1674 aa30.68■■■□□ 2.5
CBX2-203ENST00000571484 RTEL1-TNFRSF6BF6WH68 1400 aa30.67■■■□□ 2.5
CBX2-203ENST00000571484 VPS8Q8N3P4 1428 aa30.64■■■□□ 2.5
CBX2-203ENST00000571484 ADGBQ8N7X0 1667 aa30.62■■■□□ 2.49
CBX2-203ENST00000571484 PPP6R1Q9UPN7 881 aa30.61■■■□□ 2.49
CBX2-203ENST00000571484 CAMSAP2Q08AD1 1489 aa30.61■■■□□ 2.49
CBX2-203ENST00000571484 PTPRTO14522 1441 aa30.6■■■□□ 2.49
CBX2-203ENST00000571484 CLTCQ00610 1675 aaKnown RBP30.6■■■□□ 2.49
CBX2-203ENST00000571484 CCDC141Q6ZP82 1450 aa30.6■■■□□ 2.49
CBX2-203ENST00000571484 DHX29Q7Z478 1369 aaKnown RBP30.6■■■□□ 2.49
CBX2-203ENST00000571484 RSPH4AQ5TD94 716 aa30.59■■■□□ 2.49
CBX2-203ENST00000571484 NCOA1Q15788 1441 aa30.58■■■□□ 2.49
CBX2-203ENST00000571484 LRRC9Q6ZRR7 1453 aa30.57■■■□□ 2.48
CBX2-203ENST00000571484 PTPRKQ15262 1439 aa30.56■■■□□ 2.48
CBX2-203ENST00000571484 KIF3BO15066 747 aa30.51■■■□□ 2.47
CBX2-203ENST00000571484 CAMSAP1Q5T5Y3 1602 aa30.51■■■□□ 2.47
CBX2-203ENST00000571484 KANK4Q5T7N3 995 aaPredicted RBP30.5■■■□□ 2.47
CBX2-203ENST00000571484 TSPY4P0CV99 314 aa30.48■■■□□ 2.47
CBX2-203ENST00000571484 TSPY10P0CW01 314 aa30.48■■■□□ 2.47
CBX2-203ENST00000571484 ARHGEF5Q12774 1597 aa30.47■■■□□ 2.47
CBX2-203ENST00000571484 MAP3K1Q13233 1512 aa30.47■■■□□ 2.47
CBX2-203ENST00000571484 NCKAP5LQ9HCH0 1330 aa30.46■■■□□ 2.47
CBX2-203ENST00000571484 MYO3AQ8NEV4 1616 aa30.45■■■□□ 2.47
CBX2-203ENST00000571484 CEP170BQ9Y4F5 1589 aaPredicted RBP30.42■■■□□ 2.46
CBX2-203ENST00000571484 ZNF142P52746 1687 aaPredicted RBP30.42■■■□□ 2.46
CBX2-203ENST00000571484 PLA2R1Q13018 1463 aa30.39■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms