RNA–Protein interactions for RNA: ENST00000571484.1

CBX2-203, Transcript of chromobox 2, humanhuman

TSL 1 (best)

Gene CBX2, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX2-203ENST00000571484 NISCHQ9Y2I1 1504 aa48.1■■■■■ 5.29
CBX2-203ENST00000571484 ABCC9O60706 1549 aa43.03■■■■■ 4.48
CBX2-203ENST00000571484 CCDC180Q9P1Z9 1646 aa43.03■■■■■ 4.48
CBX2-203ENST00000571484 RB1CC1Q8TDY2 1594 aa40.95■■■■■ 4.15
CBX2-203ENST00000571484 NACADO15069 1562 aa40.71■■■■■ 4.11
CBX2-203ENST00000571484 DCAF8L2P0C7V8 631 aa40.61■■■■■ 4.09
CBX2-203ENST00000571484 DNAJC5BQ9UF47 199 aa40.34■■■■■ 4.05
CBX2-203ENST00000571484 MYO15BQ96JP2 1530 aa40.2■■■■■ 4.03
CBX2-203ENST00000571484 PABPN1Q86U42 306 aaKnown RBP eCLIP40.14■■■■■ 4.02
CBX2-203ENST00000571484 UNC13AQ9UPW8 1703 aa39.96■■■■□ 3.99
CBX2-203ENST00000571484 ZCCHC6Q5VYS8 1495 aaKnown RBP39.88■■■■□ 3.98
CBX2-203ENST00000571484 BICRAQ9NZM4 1560 aa39.78■■■■□ 3.96
CBX2-203ENST00000571484 DCAF1Q9Y4B6 1507 aa39.72■■■■□ 3.95
CBX2-203ENST00000571484 SCRIBQ14160 1630 aa39.27■■■■□ 3.88
CBX2-203ENST00000571484 SHROOM4Q9ULL8 1493 aa39.24■■■■□ 3.87
CBX2-203ENST00000571484 CC2D2AQ9P2K1 1620 aa38.84■■■■□ 3.81
CBX2-203ENST00000571484 EIF4G1Q04637 1599 aaKnown RBP38.79■■■■□ 3.8
CBX2-203ENST00000571484 CECR2Q9BXF3 1484 aa38.75■■■■□ 3.79
CBX2-203ENST00000571484 NCAPD3P42695 1498 aa37.63■■■■□ 3.61
CBX2-203ENST00000571484 ATAD2BQ9ULI0 1458 aa37.53■■■■□ 3.6
CBX2-203ENST00000571484 SMARCA4P51532 1647 aa37.47■■■■□ 3.59
CBX2-203ENST00000571484 SMARCA2P51531 1590 aa37.39■■■■□ 3.58
CBX2-203ENST00000571484 HMGXB3Q12766 1538 aa37.31■■■■□ 3.56
CBX2-203ENST00000571484 BAZ1AQ9NRL2 1556 aaPredicted RBP37.31■■■■□ 3.56
CBX2-203ENST00000571484 BAZ1BQ9UIG0 1483 aaKnown RBP37.15■■■■□ 3.54
CBX2-203ENST00000571484 ERCC6Q03468 1493 aa37.14■■■■□ 3.54
CBX2-203ENST00000571484 PEG3Q9GZU2 1588 aa37.11■■■■□ 3.53
CBX2-203ENST00000571484 MROH2BQ7Z745 1585 aa37.08■■■■□ 3.53
CBX2-203ENST00000571484 CUX2O14529 1486 aa37.03■■■■□ 3.52
CBX2-203ENST00000571484 NESP48681 1621 aa36.99■■■■□ 3.51
CBX2-203ENST00000571484 DNAJC5Q9H3Z4 198 aa36.95■■■■□ 3.51
CBX2-203ENST00000571484 LAMC3Q9Y6N6 1575 aa36.71■■■■□ 3.47
CBX2-203ENST00000571484 WIZO95785 1651 aa36.59■■■■□ 3.45
CBX2-203ENST00000571484 THOC2Q8NI27 1593 aaKnown RBP36.55■■■■□ 3.44
CBX2-203ENST00000571484 PDS5BQ9NTI5 1447 aa36.55■■■■□ 3.44
CBX2-203ENST00000571484 CADPSQ9ULU8 1353 aa36.5■■■■□ 3.43
CBX2-203ENST00000571484 KIF21AQ7Z4S6 1674 aa36.44■■■■□ 3.42
CBX2-203ENST00000571484 RSF1Q96T23 1441 aaPredicted RBP36.37■■■■□ 3.41
CBX2-203ENST00000571484 MRC2Q9UBG0 1479 aa36.21■■■■□ 3.39
CBX2-203ENST00000571484 TOP2AP11388 1531 aaKnown RBP36.15■■■■□ 3.38
CBX2-203ENST00000571484 WDR62O43379 1518 aa36.1■■■■□ 3.37
CBX2-203ENST00000571484 CFTRP13569 1480 aa36.1■■■■□ 3.37
CBX2-203ENST00000571484 CEP164Q9UPV0 1460 aa36.09■■■■□ 3.37
CBX2-203ENST00000571484 FANCD2Q9BXW9 1451 aa36.07■■■■□ 3.37
CBX2-203ENST00000571484 CCDC88BA6NC98 1476 aa35.78■■■■□ 3.32
CBX2-203ENST00000571484 URB2Q14146 1524 aaKnown RBP35.77■■■■□ 3.32
CBX2-203ENST00000571484 PRDM2Q13029 1718 aa35.59■■■■□ 3.29
CBX2-203ENST00000571484 OSCARQ8IYS5 282 aa35.41■■■■□ 3.26
CBX2-203ENST00000571484 TOPBP1Q92547 1522 aa35.39■■■■□ 3.26
CBX2-203ENST00000571484 IFT140Q96RY7 1462 aa35.37■■■■□ 3.25
CBX2-203ENST00000571484 TRIM41Q8WV44 630 aa35.37■■■■□ 3.25
CBX2-203ENST00000571484 ZNF608Q9ULD9 1512 aaPredicted RBP35.32■■■■□ 3.25
CBX2-203ENST00000571484 ABCC8Q09428 1581 aa35.3■■■■□ 3.24
CBX2-203ENST00000571484 DNMBPQ6XZF7 1577 aa35.24■■■■□ 3.23
CBX2-203ENST00000571484 EIF4G3O43432 1585 aaKnown RBP35.07■■■■□ 3.2
CBX2-203ENST00000571484 POLA1P09884 1462 aaPredicted RBP35.04■■■■□ 3.2
CBX2-203ENST00000571484 TARBP1Q13395 1621 aaKnown RBP35.04■■■■□ 3.2
CBX2-203ENST00000571484 AQRO60306 1485 aaKnown RBP eCLIP35.02■■■■□ 3.23e-7■■■■□ 21.2
CBX2-203ENST00000571484 RAD54L2Q9Y4B4 1467 aa34.92■■■■□ 3.18
CBX2-203ENST00000571484 SOGA1O94964 1423 aa34.9■■■■□ 3.18
CBX2-203ENST00000571484 RIMBP3CA6NJZ7 1639 aa34.86■■■■□ 3.17
CBX2-203ENST00000571484 RIMBP3BA6NNM3 1639 aa34.86■■■■□ 3.17
CBX2-203ENST00000571484 RIMBP3Q9UFD9 1639 aa34.86■■■■□ 3.17
CBX2-203ENST00000571484 SUPT5HO00267 1087 aaKnown RBP34.86■■■■□ 3.17
CBX2-203ENST00000571484 TDRD9Q8NDG6 1382 aaKnown RBP34.84■■■■□ 3.17
CBX2-203ENST00000571484 FGD5Q6ZNL6 1462 aa34.83■■■■□ 3.17
CBX2-203ENST00000571484 CUX1P39880 1505 aa34.82■■■■□ 3.16
CBX2-203ENST00000571484 FBLN2P98095 1184 aa34.79■■■■□ 3.16
CBX2-203ENST00000571484 ARHGEF11O15085 1522 aa34.79■■■■□ 3.16
CBX2-203ENST00000571484 CHD1O14646 1710 aa34.75■■■■□ 3.15
CBX2-203ENST00000571484 WDR97A6NE52 1622 aa34.67■■■■□ 3.14
CBX2-203ENST00000571484 SNAPC4Q5SXM2 1469 aa34.65■■■■□ 3.14
CBX2-203ENST00000571484 CYB5RLQ6IPT4 315 aa34.59■■■■□ 3.13
CBX2-203ENST00000571484 GRIN2BQ13224 1484 aa34.58■■■■□ 3.13
CBX2-203ENST00000571484 MAGI1Q96QZ7 1491 aaPredicted RBP34.55■■■■□ 3.12
CBX2-203ENST00000571484 CHMP7Q8WUX9 453 aaPredicted RBP34.55■■■■□ 3.12
CBX2-203ENST00000571484 ARAP1Q96P48 1450 aa34.47■■■■□ 3.11
CBX2-203ENST00000571484 GAPVD1Q14C86 1478 aa34.46■■■■□ 3.11
CBX2-203ENST00000571484 ABCA10Q8WWZ4 1543 aa34.45■■■■□ 3.1
CBX2-203ENST00000571484 SYNJ2O15056 1496 aa34.44■■■■□ 3.1
CBX2-203ENST00000571484 CLASP1Q7Z460 1538 aa34.42■■■■□ 3.1
CBX2-203ENST00000571484 SYNJ1O43426 1573 aa34.39■■■■□ 3.1
CBX2-203ENST00000571484 PBRM1Q86U86 1689 aa34.35■■■■□ 3.09
CBX2-203ENST00000571484 ABCA5Q8WWZ7 1642 aa34.35■■■■□ 3.09
CBX2-203ENST00000571484 WRNQ14191 1432 aaPredicted RBP eCLIP34.34■■■■□ 3.09
CBX2-203ENST00000571484 TOP2BQ02880 1626 aa34.26■■■■□ 3.07
CBX2-203ENST00000571484 BIVM-ERCC5R4GMW8 1640 aa34.23■■■■□ 3.07
CBX2-203ENST00000571484 TRHP20396 242 aaPredicted RBP34.15■■■■□ 3.06
CBX2-203ENST00000571484 GRIN2AQ12879 1464 aa34.12■■■■□ 3.05
CBX2-203ENST00000571484 ADAMTS12P58397 1594 aa34.08■■■■□ 3.05
CBX2-203ENST00000571484 FHAD1B1AJZ9 1412 aa34.04■■■■□ 3.04
CBX2-203ENST00000571484 NUP160Q12769 1436 aa34.02■■■■□ 3.04
CBX2-203ENST00000571484 ERICH3Q5RHP9 1530 aa34■■■■□ 3.03
CBX2-203ENST00000571484 CEP170Q5SW79 1584 aa33.98■■■■□ 3.03
CBX2-203ENST00000571484 ERCC6L2Q5T890 1561 aa33.9■■■■□ 3.02
CBX2-203ENST00000571484 SHROOM2Q13796 1616 aa33.79■■■■□ 3
CBX2-203ENST00000571484 JPH4Q96JJ6 628 aa33.71■■■□□ 2.99
CBX2-203ENST00000571484 PRG4Q92954 1404 aaPredicted RBP33.69■■■□□ 2.98
CBX2-203ENST00000571484 IGF1RP08069 1367 aa33.65■■■□□ 2.98
CBX2-203ENST00000571484 KIF27Q86VH2 1401 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 1413.7 ms