RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 HECW1Q76N89 1606 aa20.21■□□□□ 0.83
CTDNEP1-205ENST00000570828 POTEHQ6S545 545 aa20.21■□□□□ 0.83
CTDNEP1-205ENST00000570828 ATP1B4Q9UN42 357 aaPredicted RBP20.21■□□□□ 0.83
CTDNEP1-205ENST00000570828 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.16■□□□□ 0.82
CTDNEP1-205ENST00000570828 TTC37Q6PGP7 1564 aa20.13■□□□□ 0.81
CTDNEP1-205ENST00000570828 RAPGEF3O95398 923 aa20.13■□□□□ 0.81
CTDNEP1-205ENST00000570828 CDK11AQ9UQ88 783 aaPredicted RBP20.13■□□□□ 0.81
CTDNEP1-205ENST00000570828 FANCAO15360 1455 aa20.12■□□□□ 0.81
CTDNEP1-205ENST00000570828 CFAP74Q9C0B2 1584 aa20.11■□□□□ 0.81
CTDNEP1-205ENST00000570828 AKNAQ7Z591 1439 aa20.09■□□□□ 0.81
CTDNEP1-205ENST00000570828 DENND4BO75064 1496 aaPredicted RBP20.08■□□□□ 0.81
CTDNEP1-205ENST00000570828 CLIP1P30622 1438 aa20.07■□□□□ 0.8
CTDNEP1-205ENST00000570828 FRMPD1Q5SYB0 1578 aa20.07■□□□□ 0.8
CTDNEP1-205ENST00000570828 PCF11O94913 1555 aaKnown RBP20.06■□□□□ 0.8
CTDNEP1-205ENST00000570828 TROQ12816 1431 aaPredicted RBP20.06■□□□□ 0.8
CTDNEP1-205ENST00000570828 CASKIN1Q8WXD9 1431 aa20.06■□□□□ 0.8
CTDNEP1-205ENST00000570828 PLCH2O75038 1416 aa20.05■□□□□ 0.8
CTDNEP1-205ENST00000570828 KIF14Q15058 1648 aa20.05■□□□□ 0.8
CTDNEP1-205ENST00000570828 CCDC18Q5T9S5 1454 aa20.04■□□□□ 0.8
CTDNEP1-205ENST00000570828 FYCO1Q9BQS8 1478 aa20.01■□□□□ 0.79
CTDNEP1-205ENST00000570828 ARHGEF40Q8TER5 1519 aa20■□□□□ 0.79
CTDNEP1-205ENST00000570828 RICTORQ6R327 1708 aa19.99■□□□□ 0.79
CTDNEP1-205ENST00000570828 EFCAB2Q5VUJ9 269 aa19.98■□□□□ 0.79
CTDNEP1-205ENST00000570828 ZMYM4Q5VZL5 1548 aa19.97■□□□□ 0.79
CTDNEP1-205ENST00000570828 LRRIQ1Q96JM4 1722 aa19.97■□□□□ 0.79
CTDNEP1-205ENST00000570828 MYO5CQ9NQX4 1742 aa19.97■□□□□ 0.79
CTDNEP1-205ENST00000570828 SCAPERQ9BY12 1400 aa19.97■□□□□ 0.79
CTDNEP1-205ENST00000570828 ARID4BQ4LE39 1312 aaPredicted RBP19.97■□□□□ 0.79
CTDNEP1-205ENST00000570828 POGZQ7Z3K3 1410 aa19.96■□□□□ 0.79
CTDNEP1-205ENST00000570828 ARHGAP5Q13017 1502 aa19.96■□□□□ 0.79
CTDNEP1-205ENST00000570828 ZFYVE16Q7Z3T8 1539 aa19.94■□□□□ 0.78
CTDNEP1-205ENST00000570828 MAGI2Q86UL8 1455 aa19.93■□□□□ 0.78
CTDNEP1-205ENST00000570828 YEATS2Q9ULM3 1422 aa19.91■□□□□ 0.78
CTDNEP1-205ENST00000570828 CEP162Q5TB80 1403 aa19.89■□□□□ 0.77
CTDNEP1-205ENST00000570828 ADAMTSL3P82987 1691 aa19.88■□□□□ 0.77
CTDNEP1-205ENST00000570828 ZNF518AQ6AHZ1 1483 aa19.88■□□□□ 0.77
CTDNEP1-205ENST00000570828 BCORL1Q5H9F3 1711 aa19.87■□□□□ 0.77
CTDNEP1-205ENST00000570828 PTPRMP28827 1452 aa19.86■□□□□ 0.77
CTDNEP1-205ENST00000570828 APLP2Q06481 763 aa19.86■□□□□ 0.77
CTDNEP1-205ENST00000570828 PREX2Q70Z35 1606 aa19.86■□□□□ 0.77
CTDNEP1-205ENST00000570828 HECW2Q9P2P5 1572 aa19.86■□□□□ 0.77
CTDNEP1-205ENST00000570828 SLC4A2P04920 1241 aa19.85■□□□□ 0.77
CTDNEP1-205ENST00000570828 MADDQ8WXG6 1647 aa19.84■□□□□ 0.77
CTDNEP1-205ENST00000570828 C9orf84Q5VXU9 1444 aa19.82■□□□□ 0.76
CTDNEP1-205ENST00000570828 KDM5CP41229 1560 aa19.82■□□□□ 0.76
CTDNEP1-205ENST00000570828 MTUS2Q5JR59 1369 aa19.82■□□□□ 0.76
CTDNEP1-205ENST00000570828 ATP10AO60312 1499 aa19.81■□□□□ 0.76
CTDNEP1-205ENST00000570828 AFAP1Q8N556 730 aa19.81■□□□□ 0.76
CTDNEP1-205ENST00000570828 CDC42BPBQ9Y5S2 1711 aa19.81■□□□□ 0.76
CTDNEP1-205ENST00000570828 ABCC1P33527 1531 aa19.81■□□□□ 0.76
CTDNEP1-205ENST00000570828 MYT1LQ9UL68 1186 aa19.8■□□□□ 0.76
CTDNEP1-205ENST00000570828 ZNF219Q9P2Y4 722 aaPredicted RBP19.78■□□□□ 0.76
CTDNEP1-205ENST00000570828 KCNA4P22459 653 aa19.77■□□□□ 0.76
CTDNEP1-205ENST00000570828 MLECQ14165 292 aa19.77■□□□□ 0.76
CTDNEP1-205ENST00000570828 GPATCH8Q9UKJ3 1502 aaKnown RBP19.76■□□□□ 0.75
CTDNEP1-205ENST00000570828 CDC42BPAQ5VT25 1732 aa19.76■□□□□ 0.75
CTDNEP1-205ENST00000570828 CCNB3Q8WWL7 1395 aa19.76■□□□□ 0.75
CTDNEP1-205ENST00000570828 ZNF777Q9ULD5 760 aaPredicted RBP19.76■□□□□ 0.75
CTDNEP1-205ENST00000570828 SIGLEC1Q9BZZ2 1709 aa19.76■□□□□ 0.75
CTDNEP1-205ENST00000570828 ARHGEF12Q9NZN5 1544 aa19.76■□□□□ 0.75
CTDNEP1-205ENST00000570828 TRAPPC8Q9Y2L5 1435 aa19.76■□□□□ 0.75
CTDNEP1-205ENST00000570828 MLH3Q9UHC1 1453 aa19.75■□□□□ 0.75
CTDNEP1-205ENST00000570828 RIMS1Q86UR5 1692 aaKnown RBP19.75■□□□□ 0.75
CTDNEP1-205ENST00000570828 EHBP1L1Q8N3D4 1523 aa19.74■□□□□ 0.75
CTDNEP1-205ENST00000570828 ITSN2Q9NZM3 1697 aa19.73■□□□□ 0.75
CTDNEP1-205ENST00000570828 CFDP1Q9UEE9 299 aaPredicted RBP19.73■□□□□ 0.75
CTDNEP1-205ENST00000570828 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
CTDNEP1-205ENST00000570828 DIP2CQ9Y2E4 1556 aa19.72■□□□□ 0.75
CTDNEP1-205ENST00000570828 SAMD9LQ8IVG5 1584 aa19.71■□□□□ 0.75
CTDNEP1-205ENST00000570828 ABCB7O75027 752 aa19.71■□□□□ 0.75
CTDNEP1-205ENST00000570828 SYCP2Q9BX26 1530 aa19.71■□□□□ 0.75
CTDNEP1-205ENST00000570828 PLEKHH2Q8IVE3 1493 aa19.7■□□□□ 0.74
CTDNEP1-205ENST00000570828 ABCA6Q8N139 1617 aa19.69■□□□□ 0.74
CTDNEP1-205ENST00000570828 REREQ9P2R6 1566 aa19.69■□□□□ 0.74
CTDNEP1-205ENST00000570828 KIAA1107Q9UPP5 1409 aa19.68■□□□□ 0.74
CTDNEP1-205ENST00000570828 FER1L4A9Z1Z3 1794 aa19.67■□□□□ 0.74
CTDNEP1-205ENST00000570828 VPS8Q8N3P4 1428 aa19.67■□□□□ 0.74
CTDNEP1-205ENST00000570828 TIAM1Q13009 1591 aa19.66■□□□□ 0.74
CTDNEP1-205ENST00000570828 HNRNPMP52272 730 aaKnown RBP eCLIP19.65■□□□□ 0.74
CTDNEP1-205ENST00000570828 SPAG9O60271 1321 aaKnown RBP19.65■□□□□ 0.74
CTDNEP1-205ENST00000570828 LMTK3Q96Q04 1460 aa19.64■□□□□ 0.73
CTDNEP1-205ENST00000570828 AGLP35573 1532 aa19.63■□□□□ 0.73
CTDNEP1-205ENST00000570828 KIDINS220Q9ULH0 1771 aa19.62■□□□□ 0.73
CTDNEP1-205ENST00000570828 NCOA2Q15596 1464 aa19.6■□□□□ 0.73
CTDNEP1-205ENST00000570828 ATP7AQ04656 1500 aa19.6■□□□□ 0.73
CTDNEP1-205ENST00000570828 ESF1Q9H501 851 aaKnown RBP19.59■□□□□ 0.73
CTDNEP1-205ENST00000570828 SUPT6HQ7KZ85 1726 aaKnown RBP19.59■□□□□ 0.73
CTDNEP1-205ENST00000570828 ZNF644Q9H582 1327 aaPredicted RBP19.58■□□□□ 0.73
CTDNEP1-205ENST00000570828 INO80Q9ULG1 1556 aaPredicted RBP19.57■□□□□ 0.72
CTDNEP1-205ENST00000570828 LRRC9Q6ZRR7 1453 aa19.55■□□□□ 0.72
CTDNEP1-205ENST00000570828 CEBPAP49715 358 aaPredicted RBP19.55■□□□□ 0.72
CTDNEP1-205ENST00000570828 SAMD1Q6SPF0 538 aaPredicted RBP19.55■□□□□ 0.72
CTDNEP1-205ENST00000570828 MBD5Q9P267 1494 aa19.54■□□□□ 0.72
CTDNEP1-205ENST00000570828 HSPA2P54652 639 aa19.54■□□□□ 0.72
CTDNEP1-205ENST00000570828 A2MP01023 1474 aa19.54■□□□□ 0.72
CTDNEP1-205ENST00000570828 CNTLNQ9NXG0 1405 aa19.53■□□□□ 0.72
CTDNEP1-205ENST00000570828 CAMSAP2Q08AD1 1489 aa19.53■□□□□ 0.72
CTDNEP1-205ENST00000570828 MAP3K1Q13233 1512 aa19.52■□□□□ 0.72
CTDNEP1-205ENST00000570828 PLXNC1O60486 1568 aa19.51■□□□□ 0.71
CTDNEP1-205ENST00000570828 CCDC141Q6ZP82 1450 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms