RNA–Protein interactions for RNA: ENST00000570625.5

EIF4A3-202, Transcript of eukaryotic translation initiation factor 4A3, humanhuman

TSL 2

Gene EIF4A3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A3-202ENST00000570625 ZNF316A6NFI3 1004 aaPredicted RBP13.66□□□□□ -0.22
EIF4A3-202ENST00000570625 LSM11P83369 360 aaKnown RBP eCLIP13.66□□□□□ -0.22
EIF4A3-202ENST00000570625 PLA2G2EQ9NZK7 142 aa13.62□□□□□ -0.23
EIF4A3-202ENST00000570625 SOX12O15370 315 aa13.61□□□□□ -0.23
EIF4A3-202ENST00000570625 MS4A4AQ96JQ5 239 aa13.61□□□□□ -0.23
EIF4A3-202ENST00000570625 PHF8Q9UPP1 1060 aa13.57□□□□□ -0.24
EIF4A3-202ENST00000570625 AXIN2Q9Y2T1 843 aa13.53□□□□□ -0.24
EIF4A3-202ENST00000570625 HCSTQ9UBK5 93 aa13.52□□□□□ -0.25
EIF4A3-202ENST00000570625 TRIM41Q8WV44 630 aa13.51□□□□□ -0.25
EIF4A3-202ENST00000570625 NUDT7P0C024 238 aa13.49□□□□□ -0.25
EIF4A3-202ENST00000570625 PBX2P40425 430 aa13.49□□□□□ -0.25
EIF4A3-202ENST00000570625 POTEEQ6S8J3 1075 aa13.49□□□□□ -0.25
EIF4A3-202ENST00000570625 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.47□□□□□ -0.25
EIF4A3-202ENST00000570625 ZFP91Q96JP5 570 aaPredicted RBP13.47□□□□□ -0.25
EIF4A3-202ENST00000570625 LHX6Q9UPM6 363 aa13.45□□□□□ -0.26
EIF4A3-202ENST00000570625 RIOK3O14730 519 aaKnown RBP13.43□□□□□ -0.26
EIF4A3-202ENST00000570625 RNF25Q96BH1 459 aaPredicted RBP13.39□□□□□ -0.27
EIF4A3-202ENST00000570625 VGFO15240 615 aaPredicted RBP13.38□□□□□ -0.27
EIF4A3-202ENST00000570625 NLRP6P59044 892 aa13.38□□□□□ -0.27
EIF4A3-202ENST00000570625 ADGRD1Q6QNK2 874 aa13.38□□□□□ -0.27
EIF4A3-202ENST00000570625 C2orf72A6NCS6 295 aa13.37□□□□□ -0.27
EIF4A3-202ENST00000570625 PCDHGA4Q9Y5G9 962 aa13.36□□□□□ -0.27
EIF4A3-202ENST00000570625 KIF3CO14782 793 aa13.35□□□□□ -0.27
EIF4A3-202ENST00000570625 ARHGAP33O14559 1287 aa13.33□□□□□ -0.28
EIF4A3-202ENST00000570625 FBXO22Q8NEZ5 403 aa13.33□□□□□ -0.28
EIF4A3-202ENST00000570625 SLC34A2O95436 690 aa13.29□□□□□ -0.28
EIF4A3-202ENST00000570625 KCTD12Q96CX2 325 aaKnown RBP13.25□□□□□ -0.29
EIF4A3-202ENST00000570625 HRO43593 1189 aa13.24□□□□□ -0.29
EIF4A3-202ENST00000570625 DMRTA1Q5VZB9 504 aa13.24□□□□□ -0.29
EIF4A3-202ENST00000570625 BCL11BQ9C0K0 894 aaPredicted RBP13.24□□□□□ -0.29
EIF4A3-202ENST00000570625 PSEN2P49810 448 aa13.23□□□□□ -0.29
EIF4A3-202ENST00000570625 MFRPQ9BY79 579 aa13.23□□□□□ -0.29
EIF4A3-202ENST00000570625 TK2O00142 265 aa13.22□□□□□ -0.29
EIF4A3-202ENST00000570625 PSDA5PKW4 1024 aaPredicted RBP13.2□□□□□ -0.3
EIF4A3-202ENST00000570625 STAC3Q96MF2 364 aa13.2□□□□□ -0.3
EIF4A3-202ENST00000570625 STK24Q9Y6E0 443 aa13.2□□□□□ -0.3
EIF4A3-202ENST00000570625 TMC2Q8TDI7 906 aa13.19□□□□□ -0.3
EIF4A3-202ENST00000570625 PTPN5P54829 565 aa13.14□□□□□ -0.31
EIF4A3-202ENST00000570625 IRX2Q9BZI1 471 aaPredicted RBP13.13□□□□□ -0.31
EIF4A3-202ENST00000570625 KDM4FA0A1W2PPD8 638 aa13.12□□□□□ -0.31
EIF4A3-202ENST00000570625 DNAJC5Q9H3Z4 198 aa13.12□□□□□ -0.31
EIF4A3-202ENST00000570625 TAOK2Q9UL54 1235 aa13.11□□□□□ -0.31
EIF4A3-202ENST00000570625 RGS20O76081 388 aa13.09□□□□□ -0.31
EIF4A3-202ENST00000570625 STK25O00506 426 aa13.07□□□□□ -0.32
EIF4A3-202ENST00000570625 PPP4R3BQ5MIZ7 849 aa13.06□□□□□ -0.32
EIF4A3-202ENST00000570625 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
EIF4A3-202ENST00000570625 KCNK17Q96T54 332 aa13.03□□□□□ -0.32
EIF4A3-202ENST00000570625 IFFO2Q5TF58 517 aa13.01□□□□□ -0.33
EIF4A3-202ENST00000570625 VPS9D1Q9Y2B5 631 aa13□□□□□ -0.33
EIF4A3-202ENST00000570625 PPP1R37O75864 691 aa12.99□□□□□ -0.33
EIF4A3-202ENST00000570625 KCNH8Q96L42 1107 aa12.99□□□□□ -0.33
EIF4A3-202ENST00000570625 A0A0G2JS52 829 aa12.97□□□□□ -0.33
EIF4A3-202ENST00000570625 PLPP6Q8IY26 295 aa12.95□□□□□ -0.34
EIF4A3-202ENST00000570625 TBC1D12O60347 775 aa12.94□□□□□ -0.34
EIF4A3-202ENST00000570625 FOXK1P85037 733 aa12.92□□□□□ -0.34
EIF4A3-202ENST00000570625 THSD4Q6ZMP0 1018 aa12.92□□□□□ -0.34
EIF4A3-202ENST00000570625 GOLGA8CPA6NN73 597 aa12.89□□□□□ -0.35
EIF4A3-202ENST00000570625 BHMG1C9JSJ3 638 aaPredicted RBP12.87□□□□□ -0.35
EIF4A3-202ENST00000570625 WNT2BQ93097 391 aa12.87□□□□□ -0.35
EIF4A3-202ENST00000570625 DSG2Q14126 1118 aa12.85□□□□□ -0.35
EIF4A3-202ENST00000570625 SLC4A5Q9BY07 1137 aa12.85□□□□□ -0.35
EIF4A3-202ENST00000570625 GPHNQ9NQX3 736 aaPredicted RBP12.85□□□□□ -0.35
EIF4A3-202ENST00000570625 Q6ZNB5 142 aa12.84□□□□□ -0.35
EIF4A3-202ENST00000570625 ZNF454Q8N9F8 522 aa12.84□□□□□ -0.35
EIF4A3-202ENST00000570625 ECM2O94769 699 aaPredicted RBP12.82□□□□□ -0.36
EIF4A3-202ENST00000570625 MRPL50Q8N5N7 158 aaKnown RBP12.82□□□□□ -0.36
EIF4A3-202ENST00000570625 BCL2L12Q9HB09 334 aa12.8□□□□□ -0.36
EIF4A3-202ENST00000570625 ZBED2Q9BTP6 218 aa12.77□□□□□ -0.37
EIF4A3-202ENST00000570625 PTPREP23469 700 aa12.76□□□□□ -0.37
EIF4A3-202ENST00000570625 UPF1Q92900 1129 aaKnown RBP eCLIP12.76□□□□□ -0.37
EIF4A3-202ENST00000570625 RGL2O15211 777 aa12.74□□□□□ -0.37
EIF4A3-202ENST00000570625 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
EIF4A3-202ENST00000570625 FOSBP53539 338 aa12.7□□□□□ -0.38
EIF4A3-202ENST00000570625 NBPF3Q9H094 633 aa12.69□□□□□ -0.38
EIF4A3-202ENST00000570625 ITGBL1O95965 494 aaPredicted RBP12.67□□□□□ -0.38
EIF4A3-202ENST00000570625 ADAM33Q9BZ11 813 aa12.63□□□□□ -0.39
EIF4A3-202ENST00000570625 ZDHHC16Q969W1 377 aa12.62□□□□□ -0.39
EIF4A3-202ENST00000570625 ANKK1Q8NFD2 765 aa12.61□□□□□ -0.39
EIF4A3-202ENST00000570625 PKD2Q13563 968 aa12.6□□□□□ -0.39
EIF4A3-202ENST00000570625 ANO8Q9HCE9 1232 aaPredicted RBP12.6□□□□□ -0.39
EIF4A3-202ENST00000570625 BCAMP50895 628 aa12.59□□□□□ -0.39
EIF4A3-202ENST00000570625 JPH4Q96JJ6 628 aa12.59□□□□□ -0.39
EIF4A3-202ENST00000570625 LCE2BO14633 110 aa12.57□□□□□ -0.4
EIF4A3-202ENST00000570625 TRAF7Q6Q0C0 670 aa12.57□□□□□ -0.4
EIF4A3-202ENST00000570625 KCNC4Q03721 635 aa12.56□□□□□ -0.4
EIF4A3-202ENST00000570625 LAPTM4AQ15012 233 aa12.56□□□□□ -0.4
EIF4A3-202ENST00000570625 EVI5O60447 810 aa12.55□□□□□ -0.4
EIF4A3-202ENST00000570625 PROX2Q3B8N5 592 aa12.55□□□□□ -0.4
EIF4A3-202ENST00000570625 RABGEF1Q9UJ41 708 aa12.55□□□□□ -0.4
EIF4A3-202ENST00000570625 GFRA3O60609 400 aa12.54□□□□□ -0.4
EIF4A3-202ENST00000570625 PPP1R15BQ5SWA1 713 aa12.54□□□□□ -0.4
EIF4A3-202ENST00000570625 SOWAHBA6NEL2 793 aa12.53□□□□□ -0.4
EIF4A3-202ENST00000570625 WBP1LQ9NX94 342 aa12.51□□□□□ -0.41
EIF4A3-202ENST00000570625 CRISPLD2Q9H0B8 497 aa12.5□□□□□ -0.41
EIF4A3-202ENST00000570625 PPP1R3GB7ZBB8 358 aa12.49□□□□□ -0.41
EIF4A3-202ENST00000570625 NYAP1Q6ZVC0 841 aa12.49□□□□□ -0.41
EIF4A3-202ENST00000570625 COL9A1P20849 921 aa12.48□□□□□ -0.41
EIF4A3-202ENST00000570625 ZFRQ96KR1 1074 aaKnown RBP12.47□□□□□ -0.41
EIF4A3-202ENST00000570625 LAPTM4BQ86VI4 370 aa12.46□□□□□ -0.41
EIF4A3-202ENST00000570625 KIAA1468Q9P260 1216 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms