RNA–Protein interactions for RNA: ENST00000569653.1

GTF3C1-211, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 2

Gene GTF3C1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-211ENST00000569653 CASKIN1Q8WXD9 1431 aa22.76■■□□□ 1.23
GTF3C1-211ENST00000569653 ZFYVE16Q7Z3T8 1539 aa22.76■■□□□ 1.23
GTF3C1-211ENST00000569653 SCAPERQ9BY12 1400 aa22.75■■□□□ 1.23
GTF3C1-211ENST00000569653 CDC42BPBQ9Y5S2 1711 aa22.75■■□□□ 1.23
GTF3C1-211ENST00000569653 RIMS1Q86UR5 1692 aaKnown RBP22.71■■□□□ 1.23
GTF3C1-211ENST00000569653 CLIP1P30622 1438 aa22.69■■□□□ 1.22
GTF3C1-211ENST00000569653 PREX2Q70Z35 1606 aa22.68■■□□□ 1.22
GTF3C1-211ENST00000569653 ARHGAP5Q13017 1502 aa22.68■■□□□ 1.22
GTF3C1-211ENST00000569653 CCDC18Q5T9S5 1454 aa22.68■■□□□ 1.22
GTF3C1-211ENST00000569653 MAGI2Q86UL8 1455 aa22.68■■□□□ 1.22
GTF3C1-211ENST00000569653 ARID4BQ4LE39 1312 aaPredicted RBP22.68■■□□□ 1.22
GTF3C1-211ENST00000569653 CDK11AQ9UQ88 783 aaPredicted RBP22.68■■□□□ 1.22
GTF3C1-211ENST00000569653 FYCO1Q9BQS8 1478 aa22.67■■□□□ 1.22
GTF3C1-211ENST00000569653 CDC42BPAQ5VT25 1732 aa22.67■■□□□ 1.22
GTF3C1-211ENST00000569653 KDM5CP41229 1560 aa22.66■■□□□ 1.22
GTF3C1-211ENST00000569653 EFCAB2Q5VUJ9 269 aa22.65■■□□□ 1.22
GTF3C1-211ENST00000569653 ARHGEF12Q9NZN5 1544 aa22.63■■□□□ 1.21
GTF3C1-211ENST00000569653 ITSN2Q9NZM3 1697 aa22.61■■□□□ 1.21
GTF3C1-211ENST00000569653 ABCC1P33527 1531 aa22.61■■□□□ 1.21
GTF3C1-211ENST00000569653 FER1L4A9Z1Z3 1794 aa22.61■■□□□ 1.21
GTF3C1-211ENST00000569653 ZNF518AQ6AHZ1 1483 aa22.6■■□□□ 1.21
GTF3C1-211ENST00000569653 AFAP1Q8N556 730 aa22.59■■□□□ 1.21
GTF3C1-211ENST00000569653 ATP10AO60312 1499 aa22.59■■□□□ 1.21
GTF3C1-211ENST00000569653 DIP2CQ9Y2E4 1556 aa22.59■■□□□ 1.21
GTF3C1-211ENST00000569653 ABCA6Q8N139 1617 aa22.58■■□□□ 1.21
GTF3C1-211ENST00000569653 LMTK3Q96Q04 1460 aa22.58■■□□□ 1.2
GTF3C1-211ENST00000569653 C9orf84Q5VXU9 1444 aa22.57■■□□□ 1.2
GTF3C1-211ENST00000569653 TRAPPC8Q9Y2L5 1435 aa22.57■■□□□ 1.2
GTF3C1-211ENST00000569653 SAMD9LQ8IVG5 1584 aa22.54■■□□□ 1.2
GTF3C1-211ENST00000569653 MLECQ14165 292 aa22.53■■□□□ 1.2
GTF3C1-211ENST00000569653 KIDINS220Q9ULH0 1771 aa22.52■■□□□ 1.2
GTF3C1-211ENST00000569653 GPATCH8Q9UKJ3 1502 aaKnown RBP22.52■■□□□ 1.19
GTF3C1-211ENST00000569653 ILDR1Q86SU0 546 aaPredicted RBP22.51■■□□□ 1.19
GTF3C1-211ENST00000569653 MLH3Q9UHC1 1453 aa22.51■■□□□ 1.19
GTF3C1-211ENST00000569653 REREQ9P2R6 1566 aa22.5■■□□□ 1.19
GTF3C1-211ENST00000569653 CEP162Q5TB80 1403 aa22.48■■□□□ 1.19
GTF3C1-211ENST00000569653 SYCP2Q9BX26 1530 aa22.47■■□□□ 1.19
GTF3C1-211ENST00000569653 PLPPR3Q6T4P5 718 aa22.47■■□□□ 1.19
GTF3C1-211ENST00000569653 TIAM1Q13009 1591 aa22.42■■□□□ 1.18
GTF3C1-211ENST00000569653 HSPA2P54652 639 aa22.42■■□□□ 1.18
GTF3C1-211ENST00000569653 AGLP35573 1532 aa22.41■■□□□ 1.18
GTF3C1-211ENST00000569653 CEBPAP49715 358 aaPredicted RBP22.39■■□□□ 1.17
GTF3C1-211ENST00000569653 ZNF777Q9ULD5 760 aaPredicted RBP22.39■■□□□ 1.17
GTF3C1-211ENST00000569653 EHBP1L1Q8N3D4 1523 aa22.38■■□□□ 1.17
GTF3C1-211ENST00000569653 INO80Q9ULG1 1556 aaPredicted RBP22.38■■□□□ 1.17
GTF3C1-211ENST00000569653 MTUS2Q5JR59 1369 aa22.38■■□□□ 1.17
GTF3C1-211ENST00000569653 C3P01024 1663 aa22.37■■□□□ 1.17
GTF3C1-211ENST00000569653 PREX1Q8TCU6 1659 aa22.37■■□□□ 1.17
GTF3C1-211ENST00000569653 HNRNPMP52272 730 aaKnown RBP eCLIP22.36■■□□□ 1.17
GTF3C1-211ENST00000569653 MYT1LQ9UL68 1186 aa22.36■■□□□ 1.17
GTF3C1-211ENST00000569653 CCNB3Q8WWL7 1395 aa22.36■■□□□ 1.17
GTF3C1-211ENST00000569653 KIAA1107Q9UPP5 1409 aa22.34■■□□□ 1.17
GTF3C1-211ENST00000569653 ATP7AQ04656 1500 aa22.34■■□□□ 1.17
GTF3C1-211ENST00000569653 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.17
GTF3C1-211ENST00000569653 SUPT6HQ7KZ85 1726 aaKnown RBP22.33■■□□□ 1.17
GTF3C1-211ENST00000569653 ZNF644Q9H582 1327 aaPredicted RBP22.32■■□□□ 1.16
GTF3C1-211ENST00000569653 CFDP1Q9UEE9 299 aaPredicted RBP22.32■■□□□ 1.16
GTF3C1-211ENST00000569653 PLXNC1O60486 1568 aa22.32■■□□□ 1.16
GTF3C1-211ENST00000569653 PLEKHH2Q8IVE3 1493 aa22.29■■□□□ 1.16
GTF3C1-211ENST00000569653 MBD5Q9P267 1494 aa22.29■■□□□ 1.16
GTF3C1-211ENST00000569653 SPAG9O60271 1321 aaKnown RBP22.29■■□□□ 1.16
GTF3C1-211ENST00000569653 SETD1BQ9UPS6 1966 aaKnown RBP22.29■■□□□ 1.16
GTF3C1-211ENST00000569653 STRCQ7RTU9 1775 aa22.28■■□□□ 1.16
GTF3C1-211ENST00000569653 NCOA2Q15596 1464 aa22.26■■□□□ 1.15
GTF3C1-211ENST00000569653 MROH2AA6NES4 1674 aa22.23■■□□□ 1.15
GTF3C1-211ENST00000569653 A2MP01023 1474 aa22.23■■□□□ 1.15
GTF3C1-211ENST00000569653 ADGBQ8N7X0 1667 aa22.23■■□□□ 1.15
GTF3C1-211ENST00000569653 VPS8Q8N3P4 1428 aa22.23■■□□□ 1.15
GTF3C1-211ENST00000569653 CLTCQ00610 1675 aaKnown RBP22.21■■□□□ 1.15
GTF3C1-211ENST00000569653 CAMSAP2Q08AD1 1489 aa22.2■■□□□ 1.14
GTF3C1-211ENST00000569653 UHRF1BP1Q6BDS2 1440 aa22.19■■□□□ 1.14
GTF3C1-211ENST00000569653 CNTLNQ9NXG0 1405 aa22.18■■□□□ 1.14
GTF3C1-211ENST00000569653 LRRC9Q6ZRR7 1453 aa22.16■■□□□ 1.14
GTF3C1-211ENST00000569653 FBXO41Q8TF61 875 aa22.15■■□□□ 1.14
GTF3C1-211ENST00000569653 CCDC141Q6ZP82 1450 aa22.13■■□□□ 1.13
GTF3C1-211ENST00000569653 RTEL1-TNFRSF6BF6WH68 1400 aa22.13■■□□□ 1.13
GTF3C1-211ENST00000569653 ZMYM3Q14202 1370 aa22.12■■□□□ 1.13
GTF3C1-211ENST00000569653 KANK4Q5T7N3 995 aaPredicted RBP22.12■■□□□ 1.13
GTF3C1-211ENST00000569653 ARHGEF5Q12774 1597 aa22.11■■□□□ 1.13
GTF3C1-211ENST00000569653 NPATQ14207 1427 aa22.1■■□□□ 1.13
GTF3C1-211ENST00000569653 ESF1Q9H501 851 aaKnown RBP22.1■■□□□ 1.13
GTF3C1-211ENST00000569653 MAP3K1Q13233 1512 aa22.1■■□□□ 1.13
GTF3C1-211ENST00000569653 MYO3AQ8NEV4 1616 aa22.09■■□□□ 1.13
GTF3C1-211ENST00000569653 PTPRKQ15262 1439 aa22.08■■□□□ 1.13
GTF3C1-211ENST00000569653 GGT6Q6P531 493 aa22.07■■□□□ 1.12
GTF3C1-211ENST00000569653 DHX29Q7Z478 1369 aaKnown RBP22.07■■□□□ 1.12
GTF3C1-211ENST00000569653 ZNF142P52746 1687 aaPredicted RBP22.07■■□□□ 1.12
GTF3C1-211ENST00000569653 NCOA1Q15788 1441 aa22.06■■□□□ 1.12
GTF3C1-211ENST00000569653 CAMSAP1Q5T5Y3 1602 aa22.04■■□□□ 1.12
GTF3C1-211ENST00000569653 CERKQ8TCT0 537 aa22.03■■□□□ 1.12
GTF3C1-211ENST00000569653 MAST1Q9Y2H9 1570 aa22.01■■□□□ 1.11
GTF3C1-211ENST00000569653 CEP170BQ9Y4F5 1589 aaPredicted RBP22.01■■□□□ 1.11
GTF3C1-211ENST00000569653 PTPRTO14522 1441 aa22.01■■□□□ 1.11
GTF3C1-211ENST00000569653 MYOM3Q5VTT5 1437 aa22■■□□□ 1.11
GTF3C1-211ENST00000569653 KIF3BO15066 747 aa21.97■■□□□ 1.11
GTF3C1-211ENST00000569653 LTBP4Q8N2S1 1624 aa21.97■■□□□ 1.11
GTF3C1-211ENST00000569653 KDM5DQ9BY66 1539 aa21.96■■□□□ 1.11
GTF3C1-211ENST00000569653 RNF17Q9BXT8 1623 aaKnown RBP21.96■■□□□ 1.11
GTF3C1-211ENST00000569653 RSPH4AQ5TD94 716 aa21.96■■□□□ 1.11
GTF3C1-211ENST00000569653 PPP6R1Q9UPN7 881 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms