RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 SCAPERQ9BY12 1400 aa26.71■■□□□ 1.87
EDC3-216ENST00000569561 PREX2Q70Z35 1606 aa26.69■■□□□ 1.86
EDC3-216ENST00000569561 ARHGAP5Q13017 1502 aa26.69■■□□□ 1.86
EDC3-216ENST00000569561 ARHGEF40Q8TER5 1519 aa26.69■■□□□ 1.86
EDC3-216ENST00000569561 CDC42BPBQ9Y5S2 1711 aa26.68■■□□□ 1.86
EDC3-216ENST00000569561 VPS8Q8N3P4 1428 aa26.66■■□□□ 1.86
EDC3-216ENST00000569561 MAGI2Q86UL8 1455 aa26.63■■□□□ 1.85
EDC3-216ENST00000569561 GPATCH8Q9UKJ3 1502 aaKnown RBP26.63■■□□□ 1.85
EDC3-216ENST00000569561 CDC42BPAQ5VT25 1732 aa26.62■■□□□ 1.85
EDC3-216ENST00000569561 MTUS2Q5JR59 1369 aa26.61■■□□□ 1.85
EDC3-216ENST00000569561 EHBP1L1Q8N3D4 1523 aa26.61■■□□□ 1.85
EDC3-216ENST00000569561 YEATS2Q9ULM3 1422 aa26.61■■□□□ 1.85
EDC3-216ENST00000569561 ABCC1P33527 1531 aa26.6■■□□□ 1.85
EDC3-216ENST00000569561 KDM5CP41229 1560 aa26.59■■□□□ 1.85
EDC3-216ENST00000569561 ZFYVE16Q7Z3T8 1539 aa26.59■■□□□ 1.85
EDC3-216ENST00000569561 ARHGEF12Q9NZN5 1544 aa26.59■■□□□ 1.85
EDC3-216ENST00000569561 ZNF518AQ6AHZ1 1483 aa26.57■■□□□ 1.84
EDC3-216ENST00000569561 TIAM1Q13009 1591 aa26.55■■□□□ 1.84
EDC3-216ENST00000569561 TRAPPC8Q9Y2L5 1435 aa26.53■■□□□ 1.84
EDC3-216ENST00000569561 SAMD9LQ8IVG5 1584 aa26.53■■□□□ 1.84
EDC3-216ENST00000569561 AFAP1Q8N556 730 aa26.52■■□□□ 1.84
EDC3-216ENST00000569561 SIGLEC1Q9BZZ2 1709 aa26.51■■□□□ 1.83
EDC3-216ENST00000569561 ADAMTSL3P82987 1691 aa26.51■■□□□ 1.83
EDC3-216ENST00000569561 ITSN2Q9NZM3 1697 aa26.5■■□□□ 1.83
EDC3-216ENST00000569561 CCNB3Q8WWL7 1395 aa26.5■■□□□ 1.83
EDC3-216ENST00000569561 BCORL1Q5H9F3 1711 aa26.49■■□□□ 1.83
EDC3-216ENST00000569561 MAP3K1Q13233 1512 aa26.49■■□□□ 1.83
EDC3-216ENST00000569561 MLH3Q9UHC1 1453 aa26.49■■□□□ 1.83
EDC3-216ENST00000569561 HECW2Q9P2P5 1572 aa26.46■■□□□ 1.83
EDC3-216ENST00000569561 ATP10AO60312 1499 aa26.46■■□□□ 1.83
EDC3-216ENST00000569561 KIAA1107Q9UPP5 1409 aa26.46■■□□□ 1.83
EDC3-216ENST00000569561 NCOA2Q15596 1464 aa26.45■■□□□ 1.82
EDC3-216ENST00000569561 LRRC9Q6ZRR7 1453 aa26.45■■□□□ 1.82
EDC3-216ENST00000569561 SYCP2Q9BX26 1530 aa26.44■■□□□ 1.82
EDC3-216ENST00000569561 CFDP1Q9UEE9 299 aaPredicted RBP26.44■■□□□ 1.82
EDC3-216ENST00000569561 C9orf84Q5VXU9 1444 aa26.44■■□□□ 1.82
EDC3-216ENST00000569561 PLEKHH2Q8IVE3 1493 aa26.42■■□□□ 1.82
EDC3-216ENST00000569561 DIP2CQ9Y2E4 1556 aa26.42■■□□□ 1.82
EDC3-216ENST00000569561 ARID4BQ4LE39 1312 aaPredicted RBP26.4■■□□□ 1.82
EDC3-216ENST00000569561 SUPT6HQ7KZ85 1726 aaKnown RBP26.4■■□□□ 1.82
EDC3-216ENST00000569561 ZNF777Q9ULD5 760 aaPredicted RBP26.4■■□□□ 1.82
EDC3-216ENST00000569561 REREQ9P2R6 1566 aa26.4■■□□□ 1.82
EDC3-216ENST00000569561 ABCA6Q8N139 1617 aa26.39■■□□□ 1.82
EDC3-216ENST00000569561 MADDQ8WXG6 1647 aa26.39■■□□□ 1.82
EDC3-216ENST00000569561 PTPRMP28827 1452 aa26.38■■□□□ 1.81
EDC3-216ENST00000569561 KANK4Q5T7N3 995 aaPredicted RBP26.37■■□□□ 1.81
EDC3-216ENST00000569561 MBD5Q9P267 1494 aa26.36■■□□□ 1.81
EDC3-216ENST00000569561 KIDINS220Q9ULH0 1771 aa26.36■■□□□ 1.81
EDC3-216ENST00000569561 HNRNPMP52272 730 aaKnown RBP eCLIP26.36■■□□□ 1.81
EDC3-216ENST00000569561 ZNF644Q9H582 1327 aaPredicted RBP26.36■■□□□ 1.81
EDC3-216ENST00000569561 AGLP35573 1532 aa26.3■■□□□ 1.8
EDC3-216ENST00000569561 INO80Q9ULG1 1556 aaPredicted RBP26.3■■□□□ 1.8
EDC3-216ENST00000569561 SPAG9O60271 1321 aaKnown RBP26.28■■□□□ 1.8
EDC3-216ENST00000569561 CAMSAP2Q08AD1 1489 aa26.28■■□□□ 1.8
EDC3-216ENST00000569561 ATP7AQ04656 1500 aa26.28■■□□□ 1.8
EDC3-216ENST00000569561 RIMS1Q86UR5 1692 aaKnown RBP26.26■■□□□ 1.79
EDC3-216ENST00000569561 MYT1LQ9UL68 1186 aa26.24■■□□□ 1.79
EDC3-216ENST00000569561 MLECQ14165 292 aa26.23■■□□□ 1.79
EDC3-216ENST00000569561 PLXNC1O60486 1568 aa26.21■■□□□ 1.79
EDC3-216ENST00000569561 RTEL1-TNFRSF6BF6WH68 1400 aa26.21■■□□□ 1.79
EDC3-216ENST00000569561 MYOM3Q5VTT5 1437 aa26.21■■□□□ 1.79
EDC3-216ENST00000569561 CCDC141Q6ZP82 1450 aa26.2■■□□□ 1.78
EDC3-216ENST00000569561 MIA2Q96PC5 1412 aa26.2■■□□□ 1.78
EDC3-216ENST00000569561 FER1L4A9Z1Z3 1794 aa26.19■■□□□ 1.78
EDC3-216ENST00000569561 ARHGEF5Q12774 1597 aa26.19■■□□□ 1.78
EDC3-216ENST00000569561 A2MP01023 1474 aa26.17■■□□□ 1.78
EDC3-216ENST00000569561 RSPH4AQ5TD94 716 aa26.15■■□□□ 1.78
EDC3-216ENST00000569561 APLP2Q06481 763 aa26.14■■□□□ 1.78
EDC3-216ENST00000569561 LMTK3Q96Q04 1460 aa26.1■■□□□ 1.77
EDC3-216ENST00000569561 ADGBQ8N7X0 1667 aa26.09■■□□□ 1.77
EDC3-216ENST00000569561 DHX29Q7Z478 1369 aaKnown RBP26.07■■□□□ 1.76
EDC3-216ENST00000569561 MAST1Q9Y2H9 1570 aa26.06■■□□□ 1.76
EDC3-216ENST00000569561 FGD6Q6ZV73 1430 aa26.05■■□□□ 1.76
EDC3-216ENST00000569561 TCOF1Q13428 1488 aaKnown RBP26.04■■□□□ 1.76
EDC3-216ENST00000569561 CNTLNQ9NXG0 1405 aa26.04■■□□□ 1.76
EDC3-216ENST00000569561 CEBPAP49715 358 aaPredicted RBP26.02■■□□□ 1.76
EDC3-216ENST00000569561 PTPN23Q9H3S7 1636 aa26.02■■□□□ 1.76
EDC3-216ENST00000569561 TSPY4P0CV99 314 aa25.99■■□□□ 1.75
EDC3-216ENST00000569561 TSPY10P0CW01 314 aa25.99■■□□□ 1.75
EDC3-216ENST00000569561 ABCC5O15440 1437 aa25.98■■□□□ 1.75
EDC3-216ENST00000569561 PLPPR3Q6T4P5 718 aa25.98■■□□□ 1.75
EDC3-216ENST00000569561 C3P01024 1663 aa25.98■■□□□ 1.75
EDC3-216ENST00000569561 SHANK2Q9UPX8 1470 aa25.97■■□□□ 1.75
EDC3-216ENST00000569561 MROH2AA6NES4 1674 aa25.96■■□□□ 1.75
EDC3-216ENST00000569561 PPP6R1Q9UPN7 881 aa25.94■■□□□ 1.74
EDC3-216ENST00000569561 DAPK1P53355 1430 aa25.92■■□□□ 1.74
EDC3-216ENST00000569561 CROCC2H7BZ55 1655 aa25.92■■□□□ 1.74
EDC3-216ENST00000569561 ZMYM3Q14202 1370 aa25.92■■□□□ 1.74
EDC3-216ENST00000569561 DNMT1P26358 1616 aaKnown RBP25.92■■□□□ 1.74
EDC3-216ENST00000569561 GGT6Q6P531 493 aa25.91■■□□□ 1.74
EDC3-216ENST00000569561 ESF1Q9H501 851 aaKnown RBP25.91■■□□□ 1.74
EDC3-216ENST00000569561 PREX1Q8TCU6 1659 aa25.9■■□□□ 1.74
EDC3-216ENST00000569561 FAM135AQ9P2D6 1515 aa25.89■■□□□ 1.74
EDC3-216ENST00000569561 CLTCQ00610 1675 aaKnown RBP25.89■■□□□ 1.73
EDC3-216ENST00000569561 NPATQ14207 1427 aa25.88■■□□□ 1.73
EDC3-216ENST00000569561 KIF3BO15066 747 aa25.88■■□□□ 1.73
EDC3-216ENST00000569561 HSPA2P54652 639 aa25.87■■□□□ 1.73
EDC3-216ENST00000569561 RNF17Q9BXT8 1623 aaKnown RBP25.85■■□□□ 1.73
EDC3-216ENST00000569561 PTPRKQ15262 1439 aa25.85■■□□□ 1.73
EDC3-216ENST00000569561 UHRF1BP1Q6BDS2 1440 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms