RNA–Protein interactions for RNA: ENST00000569561.5

EDC3-216, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 5

Gene EDC3, Length 658 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-216ENST00000569561 NISCHQ9Y2I1 1504 aa41.08■■■■■ 4.17
EDC3-216ENST00000569561 CCDC180Q9P1Z9 1646 aa36.58■■■■□ 3.45
EDC3-216ENST00000569561 ABCC9O60706 1549 aa35.98■■■■□ 3.35
EDC3-216ENST00000569561 RB1CC1Q8TDY2 1594 aa34.51■■■■□ 3.12
EDC3-216ENST00000569561 NACADO15069 1562 aa34.45■■■■□ 3.11
EDC3-216ENST00000569561 MYO15BQ96JP2 1530 aa34.26■■■■□ 3.08
EDC3-216ENST00000569561 ZCCHC6Q5VYS8 1495 aaKnown RBP34.21■■■■□ 3.07
EDC3-216ENST00000569561 DCAF8L2P0C7V8 631 aa34.19■■■■□ 3.06
EDC3-216ENST00000569561 DCAF1Q9Y4B6 1507 aa34.03■■■■□ 3.04
EDC3-216ENST00000569561 UNC13AQ9UPW8 1703 aa33.71■■■□□ 2.99
EDC3-216ENST00000569561 BICRAQ9NZM4 1560 aa33.57■■■□□ 2.96
EDC3-216ENST00000569561 PABPN1Q86U42 306 aaKnown RBP eCLIP33.57■■■□□ 2.96
EDC3-216ENST00000569561 SCRIBQ14160 1630 aa33.33■■■□□ 2.93
EDC3-216ENST00000569561 DNAJC5BQ9UF47 199 aa33.3■■■□□ 2.92
EDC3-216ENST00000569561 SHROOM4Q9ULL8 1493 aa33.19■■■□□ 2.9
EDC3-216ENST00000569561 EIF4G1Q04637 1599 aaKnown RBP32.65■■■□□ 2.82
EDC3-216ENST00000569561 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
EDC3-216ENST00000569561 CECR2Q9BXF3 1484 aa32.36■■■□□ 2.77
EDC3-216ENST00000569561 SMARCA4P51532 1647 aa31.9■■■□□ 2.7
EDC3-216ENST00000569561 NCAPD3P42695 1498 aa31.84■■■□□ 2.69
EDC3-216ENST00000569561 BAZ1AQ9NRL2 1556 aaPredicted RBP31.82■■■□□ 2.68
EDC3-216ENST00000569561 ATAD2BQ9ULI0 1458 aa31.82■■■□□ 2.68
EDC3-216ENST00000569561 SMARCA2P51531 1590 aa31.72■■■□□ 2.67
EDC3-216ENST00000569561 MROH2BQ7Z745 1585 aa31.66■■■□□ 2.66
EDC3-216ENST00000569561 PEG3Q9GZU2 1588 aa31.66■■■□□ 2.66
EDC3-216ENST00000569561 HMGXB3Q12766 1538 aa31.65■■■□□ 2.66
EDC3-216ENST00000569561 BAZ1BQ9UIG0 1483 aaKnown RBP31.48■■■□□ 2.63
EDC3-216ENST00000569561 WIZO95785 1651 aa31.25■■■□□ 2.59
EDC3-216ENST00000569561 RSF1Q96T23 1441 aaPredicted RBP31.24■■■□□ 2.59
EDC3-216ENST00000569561 NESP48681 1621 aa31.11■■■□□ 2.57
EDC3-216ENST00000569561 LAMC3Q9Y6N6 1575 aa30.98■■■□□ 2.55
EDC3-216ENST00000569561 ERCC6Q03468 1493 aa30.97■■■□□ 2.55
EDC3-216ENST00000569561 TOP2AP11388 1531 aaKnown RBP30.95■■■□□ 2.55
EDC3-216ENST00000569561 CADPSQ9ULU8 1353 aa30.87■■■□□ 2.53
EDC3-216ENST00000569561 CUX2O14529 1486 aa30.82■■■□□ 2.52
EDC3-216ENST00000569561 PDS5BQ9NTI5 1447 aa30.76■■■□□ 2.51
EDC3-216ENST00000569561 THOC2Q8NI27 1593 aaKnown RBP30.71■■■□□ 2.51
EDC3-216ENST00000569561 CFTRP13569 1480 aa30.67■■■□□ 2.5
EDC3-216ENST00000569561 KIF21AQ7Z4S6 1674 aa30.67■■■□□ 2.5
EDC3-216ENST00000569561 CCDC88BA6NC98 1476 aa30.58■■■□□ 2.49
EDC3-216ENST00000569561 FANCD2Q9BXW9 1451 aa30.5■■■□□ 2.47
EDC3-216ENST00000569561 MRC2Q9UBG0 1479 aa30.49■■■□□ 2.47
EDC3-216ENST00000569561 CEP164Q9UPV0 1460 aa30.45■■■□□ 2.47
EDC3-216ENST00000569561 WDR62O43379 1518 aa30.43■■■□□ 2.46
EDC3-216ENST00000569561 PRDM2Q13029 1718 aa30.3■■■□□ 2.44
EDC3-216ENST00000569561 URB2Q14146 1524 aaKnown RBP30.25■■■□□ 2.43
EDC3-216ENST00000569561 DNAJC5Q9H3Z4 198 aa30.11■■■□□ 2.41
EDC3-216ENST00000569561 SUPT5HO00267 1087 aaKnown RBP30.1■■■□□ 2.41
EDC3-216ENST00000569561 TOPBP1Q92547 1522 aa30.01■■■□□ 2.39
EDC3-216ENST00000569561 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
EDC3-216ENST00000569561 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
EDC3-216ENST00000569561 IFT140Q96RY7 1462 aa29.86■■■□□ 2.37
EDC3-216ENST00000569561 ZNF608Q9ULD9 1512 aaPredicted RBP29.76■■■□□ 2.36
EDC3-216ENST00000569561 POLA1P09884 1462 aaPredicted RBP29.74■■■□□ 2.35
EDC3-216ENST00000569561 CUX1P39880 1505 aa29.71■■■□□ 2.35
EDC3-216ENST00000569561 TARBP1Q13395 1621 aaKnown RBP29.71■■■□□ 2.35
EDC3-216ENST00000569561 FGD5Q6ZNL6 1462 aa29.61■■■□□ 2.33
EDC3-216ENST00000569561 EIF4G3O43432 1585 aaKnown RBP29.6■■■□□ 2.33
EDC3-216ENST00000569561 RAD54L2Q9Y4B4 1467 aa29.6■■■□□ 2.33
EDC3-216ENST00000569561 SOGA1O94964 1423 aa29.57■■■□□ 2.32
EDC3-216ENST00000569561 AQRO60306 1485 aaKnown RBP eCLIP29.53■■■□□ 2.32
EDC3-216ENST00000569561 WDR97A6NE52 1622 aa29.45■■■□□ 2.3
EDC3-216ENST00000569561 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
EDC3-216ENST00000569561 OSCARQ8IYS5 282 aa29.42■■■□□ 2.3
EDC3-216ENST00000569561 WRNQ14191 1432 aaPredicted RBP eCLIP29.4■■■□□ 2.3
EDC3-216ENST00000569561 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
EDC3-216ENST00000569561 SYNJ1O43426 1573 aa29.37■■■□□ 2.29
EDC3-216ENST00000569561 BIVM-ERCC5R4GMW8 1640 aa29.37■■■□□ 2.29
EDC3-216ENST00000569561 ABCA10Q8WWZ4 1543 aa29.35■■■□□ 2.29
EDC3-216ENST00000569561 GRIN2BQ13224 1484 aa29.27■■■□□ 2.28
EDC3-216ENST00000569561 SNAPC4Q5SXM2 1469 aa29.27■■■□□ 2.28
EDC3-216ENST00000569561 ABCA5Q8WWZ7 1642 aa29.25■■■□□ 2.27
EDC3-216ENST00000569561 GAPVD1Q14C86 1478 aa29.23■■■□□ 2.27
EDC3-216ENST00000569561 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
EDC3-216ENST00000569561 CHD1O14646 1710 aa29.22■■■□□ 2.27
EDC3-216ENST00000569561 PBRM1Q86U86 1689 aa29.14■■■□□ 2.26
EDC3-216ENST00000569561 SYNJ2O15056 1496 aa29.11■■■□□ 2.25
EDC3-216ENST00000569561 FBLN2P98095 1184 aa29.08■■■□□ 2.25
EDC3-216ENST00000569561 CHMP7Q8WUX9 453 aaPredicted RBP29.02■■■□□ 2.24
EDC3-216ENST00000569561 ARHGEF11O15085 1522 aa29.02■■■□□ 2.24
EDC3-216ENST00000569561 RIMBP3CA6NJZ7 1639 aa29.02■■■□□ 2.24
EDC3-216ENST00000569561 RIMBP3BA6NNM3 1639 aa29.02■■■□□ 2.24
EDC3-216ENST00000569561 RIMBP3Q9UFD9 1639 aa29.02■■■□□ 2.24
EDC3-216ENST00000569561 CLASP1Q7Z460 1538 aa29.01■■■□□ 2.23
EDC3-216ENST00000569561 ADAMTS12P58397 1594 aa28.98■■■□□ 2.23
EDC3-216ENST00000569561 ERICH3Q5RHP9 1530 aa28.97■■■□□ 2.23
EDC3-216ENST00000569561 FHAD1B1AJZ9 1412 aa28.91■■■□□ 2.22
EDC3-216ENST00000569561 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
EDC3-216ENST00000569561 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
EDC3-216ENST00000569561 NUP160Q12769 1436 aa28.84■■■□□ 2.21
EDC3-216ENST00000569561 ARAP1Q96P48 1450 aa28.8■■■□□ 2.2
EDC3-216ENST00000569561 CEP170Q5SW79 1584 aa28.79■■■□□ 2.2
EDC3-216ENST00000569561 KIF27Q86VH2 1401 aa28.78■■■□□ 2.2
EDC3-216ENST00000569561 IGF1RP08069 1367 aa28.75■■■□□ 2.19
EDC3-216ENST00000569561 CYB5RLQ6IPT4 315 aa28.67■■■□□ 2.18
EDC3-216ENST00000569561 CUL7Q14999 1698 aa28.62■■■□□ 2.17
EDC3-216ENST00000569561 SHROOM2Q13796 1616 aa28.61■■■□□ 2.17
EDC3-216ENST00000569561 ERCC6L2Q5T890 1561 aa28.58■■■□□ 2.17
EDC3-216ENST00000569561 RUSC2Q8N2Y8 1516 aa28.55■■■□□ 2.16
EDC3-216ENST00000569561 CARMIL1Q5VZK9 1371 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms