RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 ADGRL1O94910 1474 aa19.68■□□□□ 0.74
NSMCE1-214ENST00000569236 RAPGEF3O95398 923 aa19.67■□□□□ 0.74
NSMCE1-214ENST00000569236 APLP2Q06481 763 aa19.67■□□□□ 0.74
NSMCE1-214ENST00000569236 DENND4BO75064 1496 aaPredicted RBP19.67■□□□□ 0.74
NSMCE1-214ENST00000569236 LRRC9Q6ZRR7 1453 aa19.66■□□□□ 0.74
NSMCE1-214ENST00000569236 CCNB3Q8WWL7 1395 aa19.66■□□□□ 0.74
NSMCE1-214ENST00000569236 SUPT6HQ7KZ85 1726 aaKnown RBP19.66■□□□□ 0.74
NSMCE1-214ENST00000569236 GPATCH8Q9UKJ3 1502 aaKnown RBP19.66■□□□□ 0.74
NSMCE1-214ENST00000569236 RICTORQ6R327 1708 aa19.64■□□□□ 0.74
NSMCE1-214ENST00000569236 FRMPD1Q5SYB0 1578 aa19.64■□□□□ 0.74
NSMCE1-214ENST00000569236 SCAPERQ9BY12 1400 aa19.64■□□□□ 0.73
NSMCE1-214ENST00000569236 NCOA2Q15596 1464 aa19.62■□□□□ 0.73
NSMCE1-214ENST00000569236 ITSN2Q9NZM3 1697 aa19.61■□□□□ 0.73
NSMCE1-214ENST00000569236 KANK4Q5T7N3 995 aaPredicted RBP19.61■□□□□ 0.73
NSMCE1-214ENST00000569236 CFDP1Q9UEE9 299 aaPredicted RBP19.6■□□□□ 0.73
NSMCE1-214ENST00000569236 POGZQ7Z3K3 1410 aa19.6■□□□□ 0.73
NSMCE1-214ENST00000569236 ZNF777Q9ULD5 760 aaPredicted RBP19.6■□□□□ 0.73
NSMCE1-214ENST00000569236 ABCC1P33527 1531 aa19.58■□□□□ 0.73
NSMCE1-214ENST00000569236 SAMD9LQ8IVG5 1584 aa19.57■□□□□ 0.72
NSMCE1-214ENST00000569236 ZMYM4Q5VZL5 1548 aa19.57■□□□□ 0.72
NSMCE1-214ENST00000569236 ZNF518AQ6AHZ1 1483 aa19.56■□□□□ 0.72
NSMCE1-214ENST00000569236 ARHGEF12Q9NZN5 1544 aa19.54■□□□□ 0.72
NSMCE1-214ENST00000569236 MAGI2Q86UL8 1455 aa19.53■□□□□ 0.72
NSMCE1-214ENST00000569236 PLEKHH2Q8IVE3 1493 aa19.53■□□□□ 0.72
NSMCE1-214ENST00000569236 AFAP1Q8N556 730 aa19.52■□□□□ 0.72
NSMCE1-214ENST00000569236 KDM5CP41229 1560 aa19.52■□□□□ 0.72
NSMCE1-214ENST00000569236 ARHGEF40Q8TER5 1519 aa19.52■□□□□ 0.72
NSMCE1-214ENST00000569236 SYCP2Q9BX26 1530 aa19.52■□□□□ 0.72
NSMCE1-214ENST00000569236 ZFYVE16Q7Z3T8 1539 aa19.51■□□□□ 0.71
NSMCE1-214ENST00000569236 KIAA1107Q9UPP5 1409 aa19.51■□□□□ 0.71
NSMCE1-214ENST00000569236 TRAPPC8Q9Y2L5 1435 aa19.51■□□□□ 0.71
NSMCE1-214ENST00000569236 HNRNPMP52272 730 aaKnown RBP eCLIP19.48■□□□□ 0.71
NSMCE1-214ENST00000569236 YEATS2Q9ULM3 1422 aa19.48■□□□□ 0.71
NSMCE1-214ENST00000569236 HECW2Q9P2P5 1572 aa19.48■□□□□ 0.71
NSMCE1-214ENST00000569236 ZNF644Q9H582 1327 aaPredicted RBP19.48■□□□□ 0.71
NSMCE1-214ENST00000569236 MYT1LQ9UL68 1186 aa19.47■□□□□ 0.71
NSMCE1-214ENST00000569236 MYOM3Q5VTT5 1437 aa19.47■□□□□ 0.71
NSMCE1-214ENST00000569236 CAMSAP2Q08AD1 1489 aa19.45■□□□□ 0.7
NSMCE1-214ENST00000569236 MLH3Q9UHC1 1453 aa19.45■□□□□ 0.7
NSMCE1-214ENST00000569236 MIA2Q96PC5 1412 aa19.44■□□□□ 0.7
NSMCE1-214ENST00000569236 KDM4FA0A1W2PPD8 638 aa19.42■□□□□ 0.7
NSMCE1-214ENST00000569236 MBD5Q9P267 1494 aa19.42■□□□□ 0.7
NSMCE1-214ENST00000569236 ATP10AO60312 1499 aa19.42■□□□□ 0.7
NSMCE1-214ENST00000569236 ARID4BQ4LE39 1312 aaPredicted RBP19.42■□□□□ 0.7
NSMCE1-214ENST00000569236 SPAG9O60271 1321 aaKnown RBP19.41■□□□□ 0.7
NSMCE1-214ENST00000569236 KIDINS220Q9ULH0 1771 aa19.41■□□□□ 0.7
NSMCE1-214ENST00000569236 DIP2CQ9Y2E4 1556 aa19.4■□□□□ 0.7
NSMCE1-214ENST00000569236 C9orf84Q5VXU9 1444 aa19.4■□□□□ 0.7
NSMCE1-214ENST00000569236 ABCA6Q8N139 1617 aa19.39■□□□□ 0.7
NSMCE1-214ENST00000569236 AEBP2Q6ZN18 517 aaPredicted RBP19.39■□□□□ 0.69
NSMCE1-214ENST00000569236 RSPH4AQ5TD94 716 aa19.38■□□□□ 0.69
NSMCE1-214ENST00000569236 ATP7AQ04656 1500 aa19.38■□□□□ 0.69
NSMCE1-214ENST00000569236 CCDC141Q6ZP82 1450 aa19.38■□□□□ 0.69
NSMCE1-214ENST00000569236 INO80Q9ULG1 1556 aaPredicted RBP19.38■□□□□ 0.69
NSMCE1-214ENST00000569236 ARHGEF5Q12774 1597 aa19.37■□□□□ 0.69
NSMCE1-214ENST00000569236 SIGLEC1Q9BZZ2 1709 aa19.37■□□□□ 0.69
NSMCE1-214ENST00000569236 FGD6Q6ZV73 1430 aa19.36■□□□□ 0.69
NSMCE1-214ENST00000569236 PTPN23Q9H3S7 1636 aa19.35■□□□□ 0.69
NSMCE1-214ENST00000569236 BCORL1Q5H9F3 1711 aa19.35■□□□□ 0.69
NSMCE1-214ENST00000569236 REREQ9P2R6 1566 aa19.35■□□□□ 0.69
NSMCE1-214ENST00000569236 PPARGC1BQ86YN6 1023 aaKnown RBP19.32■□□□□ 0.68
NSMCE1-214ENST00000569236 RTEL1-TNFRSF6BF6WH68 1400 aa19.32■□□□□ 0.68
NSMCE1-214ENST00000569236 ADAMTSL3P82987 1691 aa19.32■□□□□ 0.68
NSMCE1-214ENST00000569236 TSPY4P0CV99 314 aa19.32■□□□□ 0.68
NSMCE1-214ENST00000569236 TSPY10P0CW01 314 aa19.32■□□□□ 0.68
NSMCE1-214ENST00000569236 TCOF1Q13428 1488 aaKnown RBP19.3■□□□□ 0.68
NSMCE1-214ENST00000569236 ADGBQ8N7X0 1667 aa19.29■□□□□ 0.68
NSMCE1-214ENST00000569236 MLECQ14165 292 aa19.29■□□□□ 0.68
NSMCE1-214ENST00000569236 AGLP35573 1532 aa19.28■□□□□ 0.68
NSMCE1-214ENST00000569236 MADDQ8WXG6 1647 aa19.28■□□□□ 0.68
NSMCE1-214ENST00000569236 A2MP01023 1474 aa19.27■□□□□ 0.67
NSMCE1-214ENST00000569236 MAST1Q9Y2H9 1570 aa19.26■□□□□ 0.67
NSMCE1-214ENST00000569236 PLXNC1O60486 1568 aa19.25■□□□□ 0.67
NSMCE1-214ENST00000569236 DNMT1P26358 1616 aaKnown RBP19.25■□□□□ 0.67
NSMCE1-214ENST00000569236 CROCC2H7BZ55 1655 aa19.24■□□□□ 0.67
NSMCE1-214ENST00000569236 FAM50AQ14320 339 aaKnown RBP19.24■□□□□ 0.67
NSMCE1-214ENST00000569236 FER1L4A9Z1Z3 1794 aa19.23■□□□□ 0.67
NSMCE1-214ENST00000569236 ABCC5O15440 1437 aa19.23■□□□□ 0.67
NSMCE1-214ENST00000569236 DAPK1P53355 1430 aa19.23■□□□□ 0.67
NSMCE1-214ENST00000569236 RIMS1Q86UR5 1692 aaKnown RBP19.22■□□□□ 0.67
NSMCE1-214ENST00000569236 SHANK2Q9UPX8 1470 aa19.22■□□□□ 0.67
NSMCE1-214ENST00000569236 PTPRMP28827 1452 aa19.21■□□□□ 0.67
NSMCE1-214ENST00000569236 DHX29Q7Z478 1369 aaKnown RBP19.2■□□□□ 0.66
NSMCE1-214ENST00000569236 ESF1Q9H501 851 aaKnown RBP19.16■□□□□ 0.66
NSMCE1-214ENST00000569236 CHIC2Q9UKJ5 165 aa19.14■□□□□ 0.66
NSMCE1-214ENST00000569236 GGT6Q6P531 493 aa19.14■□□□□ 0.65
NSMCE1-214ENST00000569236 KIF15Q9NS87 1388 aa19.13■□□□□ 0.65
NSMCE1-214ENST00000569236 KIF3BO15066 747 aa19.13■□□□□ 0.65
NSMCE1-214ENST00000569236 DUOX2Q9NRD8 1548 aa19.13■□□□□ 0.65
NSMCE1-214ENST00000569236 ANKRD30AQ9BXX3 1397 aa19.12■□□□□ 0.65
NSMCE1-214ENST00000569236 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.12■□□□□ 0.65
NSMCE1-214ENST00000569236 PLPPR3Q6T4P5 718 aa19.11■□□□□ 0.65
NSMCE1-214ENST00000569236 RRP7BPQ9NSQ0 103 aa19.11■□□□□ 0.65
NSMCE1-214ENST00000569236 CNTLNQ9NXG0 1405 aa19.11■□□□□ 0.65
NSMCE1-214ENST00000569236 RRBP1Q9P2E9 1410 aaKnown RBP19.11■□□□□ 0.65
NSMCE1-214ENST00000569236 PCGF6Q9BYE7 350 aa19.11■□□□□ 0.65
NSMCE1-214ENST00000569236 EIF2AK4Q9P2K8 1649 aaKnown RBP19.1■□□□□ 0.65
NSMCE1-214ENST00000569236 ADGRL2O95490 1459 aa19.09■□□□□ 0.65
NSMCE1-214ENST00000569236 NCOA1Q15788 1441 aa19.09■□□□□ 0.65
NSMCE1-214ENST00000569236 PPP6R1Q9UPN7 881 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms