RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 ADGRL1O94910 1474 aa20.11■□□□□ 0.81
CDT1-203ENST00000569140 SUPT6HQ7KZ85 1726 aaKnown RBP20.11■□□□□ 0.81
CDT1-203ENST00000569140 CDC42BPBQ9Y5S2 1711 aa20.11■□□□□ 0.81
CDT1-203ENST00000569140 RAPGEF3O95398 923 aa20.1■□□□□ 0.81
CDT1-203ENST00000569140 ZNF777Q9ULD5 760 aaPredicted RBP20.1■□□□□ 0.81
CDT1-203ENST00000569140 DENND4BO75064 1496 aaPredicted RBP20.09■□□□□ 0.81
CDT1-203ENST00000569140 LRRC9Q6ZRR7 1453 aa20.09■□□□□ 0.81
CDT1-203ENST00000569140 MAP3K1Q13233 1512 aa20.07■□□□□ 0.8
CDT1-203ENST00000569140 SCAPERQ9BY12 1400 aa20.07■□□□□ 0.8
CDT1-203ENST00000569140 NCOA2Q15596 1464 aa20.06■□□□□ 0.8
CDT1-203ENST00000569140 KANK4Q5T7N3 995 aaPredicted RBP20.06■□□□□ 0.8
CDT1-203ENST00000569140 ITSN2Q9NZM3 1697 aa20.06■□□□□ 0.8
CDT1-203ENST00000569140 GPATCH8Q9UKJ3 1502 aaKnown RBP20.06■□□□□ 0.8
CDT1-203ENST00000569140 FRMPD1Q5SYB0 1578 aa20.05■□□□□ 0.8
CDT1-203ENST00000569140 CFDP1Q9UEE9 299 aaPredicted RBP20.04■□□□□ 0.8
CDT1-203ENST00000569140 RICTORQ6R327 1708 aa20.04■□□□□ 0.8
CDT1-203ENST00000569140 POGZQ7Z3K3 1410 aa20.02■□□□□ 0.79
CDT1-203ENST00000569140 MYT1LQ9UL68 1186 aa20.01■□□□□ 0.79
CDT1-203ENST00000569140 ABCC1P33527 1531 aa20.01■□□□□ 0.79
CDT1-203ENST00000569140 SAMD9LQ8IVG5 1584 aa20■□□□□ 0.79
CDT1-203ENST00000569140 SYCP2Q9BX26 1530 aa19.97■□□□□ 0.79
CDT1-203ENST00000569140 ZNF518AQ6AHZ1 1483 aa19.97■□□□□ 0.79
CDT1-203ENST00000569140 ZMYM4Q5VZL5 1548 aa19.95■□□□□ 0.78
CDT1-203ENST00000569140 ZFYVE16Q7Z3T8 1539 aa19.95■□□□□ 0.78
CDT1-203ENST00000569140 PLEKHH2Q8IVE3 1493 aa19.94■□□□□ 0.78
CDT1-203ENST00000569140 ARHGEF12Q9NZN5 1544 aa19.94■□□□□ 0.78
CDT1-203ENST00000569140 AFAP1Q8N556 730 aa19.94■□□□□ 0.78
CDT1-203ENST00000569140 TRAPPC8Q9Y2L5 1435 aa19.93■□□□□ 0.78
CDT1-203ENST00000569140 ARHGEF40Q8TER5 1519 aa19.93■□□□□ 0.78
CDT1-203ENST00000569140 HNRNPMP52272 730 aaKnown RBP eCLIP19.93■□□□□ 0.78
CDT1-203ENST00000569140 ZNF644Q9H582 1327 aaPredicted RBP19.92■□□□□ 0.78
CDT1-203ENST00000569140 YEATS2Q9ULM3 1422 aa19.91■□□□□ 0.78
CDT1-203ENST00000569140 CAMSAP2Q08AD1 1489 aa19.91■□□□□ 0.78
CDT1-203ENST00000569140 HECW2Q9P2P5 1572 aa19.91■□□□□ 0.78
CDT1-203ENST00000569140 ARID4BQ4LE39 1312 aaPredicted RBP19.9■□□□□ 0.78
CDT1-203ENST00000569140 MYOM3Q5VTT5 1437 aa19.9■□□□□ 0.78
CDT1-203ENST00000569140 KDM5CP41229 1560 aa19.9■□□□□ 0.78
CDT1-203ENST00000569140 MAGI2Q86UL8 1455 aa19.89■□□□□ 0.77
CDT1-203ENST00000569140 PPARGC1BQ86YN6 1023 aaKnown RBP19.89■□□□□ 0.77
CDT1-203ENST00000569140 KIAA1107Q9UPP5 1409 aa19.88■□□□□ 0.77
CDT1-203ENST00000569140 SPAG9O60271 1321 aaKnown RBP19.85■□□□□ 0.77
CDT1-203ENST00000569140 AEBP2Q6ZN18 517 aaPredicted RBP19.84■□□□□ 0.77
CDT1-203ENST00000569140 MIA2Q96PC5 1412 aa19.83■□□□□ 0.76
CDT1-203ENST00000569140 MLH3Q9UHC1 1453 aa19.82■□□□□ 0.76
CDT1-203ENST00000569140 ABCA6Q8N139 1617 aa19.82■□□□□ 0.76
CDT1-203ENST00000569140 C9orf84Q5VXU9 1444 aa19.82■□□□□ 0.76
CDT1-203ENST00000569140 ATP10AO60312 1499 aa19.81■□□□□ 0.76
CDT1-203ENST00000569140 DIP2CQ9Y2E4 1556 aa19.81■□□□□ 0.76
CDT1-203ENST00000569140 ATP7AQ04656 1500 aa19.81■□□□□ 0.76
CDT1-203ENST00000569140 PTPN23Q9H3S7 1636 aa19.8■□□□□ 0.76
CDT1-203ENST00000569140 CCDC141Q6ZP82 1450 aa19.8■□□□□ 0.76
CDT1-203ENST00000569140 MBD5Q9P267 1494 aa19.8■□□□□ 0.76
CDT1-203ENST00000569140 KDM4FA0A1W2PPD8 638 aa19.8■□□□□ 0.76
CDT1-203ENST00000569140 KIDINS220Q9ULH0 1771 aa19.8■□□□□ 0.76
CDT1-203ENST00000569140 FGD6Q6ZV73 1430 aa19.79■□□□□ 0.76
CDT1-203ENST00000569140 INO80Q9ULG1 1556 aaPredicted RBP19.78■□□□□ 0.76
CDT1-203ENST00000569140 MLECQ14165 292 aa19.77■□□□□ 0.76
CDT1-203ENST00000569140 ARHGEF5Q12774 1597 aa19.77■□□□□ 0.76
CDT1-203ENST00000569140 SIGLEC1Q9BZZ2 1709 aa19.76■□□□□ 0.75
CDT1-203ENST00000569140 FAM50AQ14320 339 aaKnown RBP19.75■□□□□ 0.75
CDT1-203ENST00000569140 BCORL1Q5H9F3 1711 aa19.75■□□□□ 0.75
CDT1-203ENST00000569140 TSPY4P0CV99 314 aa19.74■□□□□ 0.75
CDT1-203ENST00000569140 TSPY10P0CW01 314 aa19.74■□□□□ 0.75
CDT1-203ENST00000569140 RSPH4AQ5TD94 716 aa19.74■□□□□ 0.75
CDT1-203ENST00000569140 TCOF1Q13428 1488 aaKnown RBP19.71■□□□□ 0.75
CDT1-203ENST00000569140 REREQ9P2R6 1566 aa19.7■□□□□ 0.74
CDT1-203ENST00000569140 MADDQ8WXG6 1647 aa19.69■□□□□ 0.74
CDT1-203ENST00000569140 RTEL1-TNFRSF6BF6WH68 1400 aa19.69■□□□□ 0.74
CDT1-203ENST00000569140 ADGBQ8N7X0 1667 aa19.69■□□□□ 0.74
CDT1-203ENST00000569140 CROCC2H7BZ55 1655 aa19.68■□□□□ 0.74
CDT1-203ENST00000569140 ADAMTSL3P82987 1691 aa19.68■□□□□ 0.74
CDT1-203ENST00000569140 A2MP01023 1474 aa19.68■□□□□ 0.74
CDT1-203ENST00000569140 DNMT1P26358 1616 aaKnown RBP19.67■□□□□ 0.74
CDT1-203ENST00000569140 PLPPR3Q6T4P5 718 aa19.67■□□□□ 0.74
CDT1-203ENST00000569140 RIMS1Q86UR5 1692 aaKnown RBP19.67■□□□□ 0.74
CDT1-203ENST00000569140 DAPK1P53355 1430 aa19.67■□□□□ 0.74
CDT1-203ENST00000569140 MAST1Q9Y2H9 1570 aa19.66■□□□□ 0.74
CDT1-203ENST00000569140 FER1L4A9Z1Z3 1794 aa19.65■□□□□ 0.74
CDT1-203ENST00000569140 ABCC5O15440 1437 aa19.65■□□□□ 0.74
CDT1-203ENST00000569140 AGLP35573 1532 aa19.64■□□□□ 0.73
CDT1-203ENST00000569140 ESF1Q9H501 851 aaKnown RBP19.63■□□□□ 0.73
CDT1-203ENST00000569140 CHIC2Q9UKJ5 165 aa19.63■□□□□ 0.73
CDT1-203ENST00000569140 PLXNC1O60486 1568 aa19.62■□□□□ 0.73
CDT1-203ENST00000569140 SHANK2Q9UPX8 1470 aa19.62■□□□□ 0.73
CDT1-203ENST00000569140 ITGAEP38570 1179 aa19.6■□□□□ 0.73
CDT1-203ENST00000569140 PTPRMP28827 1452 aa19.6■□□□□ 0.73
CDT1-203ENST00000569140 DHX29Q7Z478 1369 aaKnown RBP19.59■□□□□ 0.73
CDT1-203ENST00000569140 GGT6Q6P531 493 aa19.59■□□□□ 0.73
CDT1-203ENST00000569140 RRP7BPQ9NSQ0 103 aa19.58■□□□□ 0.72
CDT1-203ENST00000569140 KIF3BO15066 747 aa19.57■□□□□ 0.72
CDT1-203ENST00000569140 ANKRD30AQ9BXX3 1397 aa19.57■□□□□ 0.72
CDT1-203ENST00000569140 KIF15Q9NS87 1388 aa19.57■□□□□ 0.72
CDT1-203ENST00000569140 DUOX2Q9NRD8 1548 aa19.54■□□□□ 0.72
CDT1-203ENST00000569140 RRBP1Q9P2E9 1410 aaKnown RBP19.51■□□□□ 0.71
CDT1-203ENST00000569140 CLTCQ00610 1675 aaKnown RBP19.51■□□□□ 0.71
CDT1-203ENST00000569140 EIF2AK4Q9P2K8 1649 aaKnown RBP19.5■□□□□ 0.71
CDT1-203ENST00000569140 CEBPAP49715 358 aaPredicted RBP19.49■□□□□ 0.71
CDT1-203ENST00000569140 CNTLNQ9NXG0 1405 aa19.49■□□□□ 0.71
CDT1-203ENST00000569140 ADGRL2O95490 1459 aa19.48■□□□□ 0.71
CDT1-203ENST00000569140 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms