RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 ARHGAP5Q13017 1502 aa32.39■■■□□ 2.78
ABCA3-206ENST00000569062 ZMYM4Q5VZL5 1548 aa32.36■■■□□ 2.77
ABCA3-206ENST00000569062 ARHGEF40Q8TER5 1519 aa32.36■■■□□ 2.77
ABCA3-206ENST00000569062 PREX2Q70Z35 1606 aa32.35■■■□□ 2.77
ABCA3-206ENST00000569062 POGZQ7Z3K3 1410 aa32.34■■■□□ 2.77
ABCA3-206ENST00000569062 CDC42BPAQ5VT25 1732 aa32.33■■■□□ 2.77
ABCA3-206ENST00000569062 YEATS2Q9ULM3 1422 aa32.28■■■□□ 2.76
ABCA3-206ENST00000569062 ZFYVE16Q7Z3T8 1539 aa32.28■■■□□ 2.76
ABCA3-206ENST00000569062 MAGI2Q86UL8 1455 aa32.25■■■□□ 2.75
ABCA3-206ENST00000569062 BCORL1Q5H9F3 1711 aa32.24■■■□□ 2.75
ABCA3-206ENST00000569062 ADAMTSL3P82987 1691 aa32.24■■■□□ 2.75
ABCA3-206ENST00000569062 ARID4BQ4LE39 1312 aaPredicted RBP32.23■■■□□ 2.75
ABCA3-206ENST00000569062 SIGLEC1Q9BZZ2 1709 aa32.23■■■□□ 2.75
ABCA3-206ENST00000569062 MTUS2Q5JR59 1369 aa32.21■■■□□ 2.75
ABCA3-206ENST00000569062 ZNF518AQ6AHZ1 1483 aa32.21■■■□□ 2.75
ABCA3-206ENST00000569062 ABCC1P33527 1531 aa32.2■■■□□ 2.74
ABCA3-206ENST00000569062 AFAP1Q8N556 730 aa32.19■■■□□ 2.74
ABCA3-206ENST00000569062 GPATCH8Q9UKJ3 1502 aaKnown RBP32.19■■■□□ 2.74
ABCA3-206ENST00000569062 ITSN2Q9NZM3 1697 aa32.18■■■□□ 2.74
ABCA3-206ENST00000569062 ARHGEF12Q9NZN5 1544 aa32.18■■■□□ 2.74
ABCA3-206ENST00000569062 KDM5CP41229 1560 aa32.18■■■□□ 2.74
ABCA3-206ENST00000569062 EHBP1L1Q8N3D4 1523 aa32.16■■■□□ 2.74
ABCA3-206ENST00000569062 MADDQ8WXG6 1647 aa32.14■■■□□ 2.74
ABCA3-206ENST00000569062 SAMD9LQ8IVG5 1584 aa32.13■■■□□ 2.73
ABCA3-206ENST00000569062 VPS8Q8N3P4 1428 aa32.12■■■□□ 2.73
ABCA3-206ENST00000569062 TRAPPC8Q9Y2L5 1435 aa32.12■■■□□ 2.73
ABCA3-206ENST00000569062 HECW2Q9P2P5 1572 aa32.11■■■□□ 2.73
ABCA3-206ENST00000569062 ZNF777Q9ULD5 760 aaPredicted RBP32.11■■■□□ 2.73
ABCA3-206ENST00000569062 ATP10AO60312 1499 aa32.1■■■□□ 2.73
ABCA3-206ENST00000569062 CCNB3Q8WWL7 1395 aa32.1■■■□□ 2.73
ABCA3-206ENST00000569062 PTPRMP28827 1452 aa32.08■■■□□ 2.73
ABCA3-206ENST00000569062 TIAM1Q13009 1591 aa32.07■■■□□ 2.72
ABCA3-206ENST00000569062 MYT1LQ9UL68 1186 aa32.06■■■□□ 2.72
ABCA3-206ENST00000569062 C9orf84Q5VXU9 1444 aa32.06■■■□□ 2.72
ABCA3-206ENST00000569062 CFDP1Q9UEE9 299 aaPredicted RBP32.05■■■□□ 2.72
ABCA3-206ENST00000569062 SYCP2Q9BX26 1530 aa32.05■■■□□ 2.72
ABCA3-206ENST00000569062 RIMS1Q86UR5 1692 aaKnown RBP32.05■■■□□ 2.72
ABCA3-206ENST00000569062 MLH3Q9UHC1 1453 aa32.04■■■□□ 2.72
ABCA3-206ENST00000569062 DIP2CQ9Y2E4 1556 aa32.04■■■□□ 2.72
ABCA3-206ENST00000569062 ABCA6Q8N139 1617 aa32.03■■■□□ 2.72
ABCA3-206ENST00000569062 MLECQ14165 292 aa32.01■■■□□ 2.71
ABCA3-206ENST00000569062 SUPT6HQ7KZ85 1726 aaKnown RBP32■■■□□ 2.71
ABCA3-206ENST00000569062 KIDINS220Q9ULH0 1771 aa32■■■□□ 2.71
ABCA3-206ENST00000569062 HNRNPMP52272 730 aaKnown RBP eCLIP31.99■■■□□ 2.71
ABCA3-206ENST00000569062 NCOA2Q15596 1464 aa31.97■■■□□ 2.71
ABCA3-206ENST00000569062 FER1L4A9Z1Z3 1794 aa31.96■■■□□ 2.71
ABCA3-206ENST00000569062 KIAA1107Q9UPP5 1409 aa31.95■■■□□ 2.71
ABCA3-206ENST00000569062 PLEKHH2Q8IVE3 1493 aa31.95■■■□□ 2.7
ABCA3-206ENST00000569062 REREQ9P2R6 1566 aa31.94■■■□□ 2.7
ABCA3-206ENST00000569062 ZNF644Q9H582 1327 aaPredicted RBP31.93■■■□□ 2.7
ABCA3-206ENST00000569062 LRRC9Q6ZRR7 1453 aa31.92■■■□□ 2.7
ABCA3-206ENST00000569062 MAP3K1Q13233 1512 aa31.89■■■□□ 2.7
ABCA3-206ENST00000569062 SPAG9O60271 1321 aaKnown RBP31.87■■■□□ 2.69
ABCA3-206ENST00000569062 KANK4Q5T7N3 995 aaPredicted RBP31.86■■■□□ 2.69
ABCA3-206ENST00000569062 INO80Q9ULG1 1556 aaPredicted RBP31.85■■■□□ 2.69
ABCA3-206ENST00000569062 ATP7AQ04656 1500 aa31.85■■■□□ 2.69
ABCA3-206ENST00000569062 PLPPR3Q6T4P5 718 aa31.84■■■□□ 2.69
ABCA3-206ENST00000569062 MBD5Q9P267 1494 aa31.84■■■□□ 2.69
ABCA3-206ENST00000569062 AGLP35573 1532 aa31.83■■■□□ 2.69
ABCA3-206ENST00000569062 CAMSAP2Q08AD1 1489 aa31.79■■■□□ 2.68
ABCA3-206ENST00000569062 LMTK3Q96Q04 1460 aa31.72■■■□□ 2.67
ABCA3-206ENST00000569062 PLXNC1O60486 1568 aa31.71■■■□□ 2.67
ABCA3-206ENST00000569062 CEBPAP49715 358 aaPredicted RBP31.7■■■□□ 2.67
ABCA3-206ENST00000569062 A2MP01023 1474 aa31.7■■■□□ 2.66
ABCA3-206ENST00000569062 ADGBQ8N7X0 1667 aa31.7■■■□□ 2.66
ABCA3-206ENST00000569062 APLP2Q06481 763 aa31.69■■■□□ 2.66
ABCA3-206ENST00000569062 CCDC141Q6ZP82 1450 aa31.69■■■□□ 2.66
ABCA3-206ENST00000569062 RTEL1-TNFRSF6BF6WH68 1400 aa31.66■■■□□ 2.66
ABCA3-206ENST00000569062 ARHGEF5Q12774 1597 aa31.65■■■□□ 2.66
ABCA3-206ENST00000569062 C3P01024 1663 aa31.65■■■□□ 2.66
ABCA3-206ENST00000569062 MYOM3Q5VTT5 1437 aa31.65■■■□□ 2.66
ABCA3-206ENST00000569062 RSPH4AQ5TD94 716 aa31.62■■■□□ 2.65
ABCA3-206ENST00000569062 ESF1Q9H501 851 aaKnown RBP31.61■■■□□ 2.65
ABCA3-206ENST00000569062 MIA2Q96PC5 1412 aa31.6■■■□□ 2.65
ABCA3-206ENST00000569062 PREX1Q8TCU6 1659 aa31.58■■■□□ 2.65
ABCA3-206ENST00000569062 HSPA2P54652 639 aa31.56■■■□□ 2.64
ABCA3-206ENST00000569062 CNTLNQ9NXG0 1405 aa31.55■■■□□ 2.64
ABCA3-206ENST00000569062 DHX29Q7Z478 1369 aaKnown RBP31.54■■■□□ 2.64
ABCA3-206ENST00000569062 MROH2AA6NES4 1674 aa31.54■■■□□ 2.64
ABCA3-206ENST00000569062 CLTCQ00610 1675 aaKnown RBP31.54■■■□□ 2.64
ABCA3-206ENST00000569062 TSPY4P0CV99 314 aa31.53■■■□□ 2.64
ABCA3-206ENST00000569062 TSPY10P0CW01 314 aa31.53■■■□□ 2.64
ABCA3-206ENST00000569062 GGT6Q6P531 493 aa31.53■■■□□ 2.64
ABCA3-206ENST00000569062 SETD1BQ9UPS6 1966 aaKnown RBP31.51■■■□□ 2.63
ABCA3-206ENST00000569062 PTPN23Q9H3S7 1636 aa31.49■■■□□ 2.63
ABCA3-206ENST00000569062 MAST1Q9Y2H9 1570 aa31.49■■■□□ 2.63
ABCA3-206ENST00000569062 ZMYM3Q14202 1370 aa31.46■■■□□ 2.63
ABCA3-206ENST00000569062 UHRF1BP1Q6BDS2 1440 aa31.44■■■□□ 2.62
ABCA3-206ENST00000569062 KIF3BO15066 747 aa31.43■■■□□ 2.62
ABCA3-206ENST00000569062 FGD6Q6ZV73 1430 aa31.42■■■□□ 2.62
ABCA3-206ENST00000569062 CROCC2H7BZ55 1655 aa31.41■■■□□ 2.62
ABCA3-206ENST00000569062 PPP6R1Q9UPN7 881 aa31.39■■■□□ 2.62
ABCA3-206ENST00000569062 TCOF1Q13428 1488 aaKnown RBP31.39■■■□□ 2.62
ABCA3-206ENST00000569062 ABCC5O15440 1437 aa31.37■■■□□ 2.61
ABCA3-206ENST00000569062 NPATQ14207 1427 aa31.35■■■□□ 2.61
ABCA3-206ENST00000569062 DNMT1P26358 1616 aaKnown RBP31.35■■■□□ 2.61
ABCA3-206ENST00000569062 SHANK2Q9UPX8 1470 aa31.32■■■□□ 2.6
ABCA3-206ENST00000569062 DAPK1P53355 1430 aa31.32■■■□□ 2.6
ABCA3-206ENST00000569062 PTPRKQ15262 1439 aa31.32■■■□□ 2.6
ABCA3-206ENST00000569062 STRCQ7RTU9 1775 aa31.31■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms