RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 PTPRKQ15262 1439 aa18.87■□□□□ 0.61
GGA2-213ENST00000568922 ABCA9Q8IUA7 1624 aa18.85■□□□□ 0.61
GGA2-213ENST00000568922 ZNF644Q9H582 1327 aaPredicted RBP18.85■□□□□ 0.61
GGA2-213ENST00000568922 DAPK1P53355 1430 aa18.85■□□□□ 0.61
GGA2-213ENST00000568922 ARHGAP5Q13017 1502 aa18.84■□□□□ 0.61
GGA2-213ENST00000568922 SETD5Q9C0A6 1442 aa18.84■□□□□ 0.61
GGA2-213ENST00000568922 HRCP23327 699 aa18.84■□□□□ 0.61
GGA2-213ENST00000568922 ZNF777Q9ULD5 760 aaPredicted RBP18.84■□□□□ 0.61
GGA2-213ENST00000568922 PLCH2O75038 1416 aa18.83■□□□□ 0.61
GGA2-213ENST00000568922 ARAP3Q8WWN8 1544 aa18.83■□□□□ 0.61
GGA2-213ENST00000568922 SAMD9LQ8IVG5 1584 aa18.83■□□□□ 0.6
GGA2-213ENST00000568922 MAPKBP1O60336 1514 aa18.83■□□□□ 0.6
GGA2-213ENST00000568922 ABCC5O15440 1437 aa18.82■□□□□ 0.6
GGA2-213ENST00000568922 CROCC2H7BZ55 1655 aa18.82■□□□□ 0.6
GGA2-213ENST00000568922 AKNAQ7Z591 1439 aa18.81■□□□□ 0.6
GGA2-213ENST00000568922 CCER1Q8TC90 406 aaPredicted RBP18.81■□□□□ 0.6
GGA2-213ENST00000568922 HFM1A2PYH4 1435 aa18.8■□□□□ 0.6
GGA2-213ENST00000568922 ARHGEF5Q12774 1597 aa18.8■□□□□ 0.6
GGA2-213ENST00000568922 RAB3GAP2Q9H2M9 1393 aa18.79■□□□□ 0.6
GGA2-213ENST00000568922 GCC2Q8IWJ2 1684 aa18.79■□□□□ 0.6
GGA2-213ENST00000568922 PLEKHH2Q8IVE3 1493 aa18.79■□□□□ 0.6
GGA2-213ENST00000568922 ADGBQ8N7X0 1667 aa18.78■□□□□ 0.6
GGA2-213ENST00000568922 ROCK1Q13464 1354 aa18.77■□□□□ 0.6
GGA2-213ENST00000568922 ZEB1P37275 1124 aaPredicted RBP18.77■□□□□ 0.59
GGA2-213ENST00000568922 NAIPQ13075 1403 aa18.76■□□□□ 0.59
GGA2-213ENST00000568922 EFCAB2Q5VUJ9 269 aa18.76■□□□□ 0.59
GGA2-213ENST00000568922 SHANK2Q9UPX8 1470 aa18.76■□□□□ 0.59
GGA2-213ENST00000568922 KIAA1107Q9UPP5 1409 aa18.75■□□□□ 0.59
GGA2-213ENST00000568922 RSPH4AQ5TD94 716 aa18.75■□□□□ 0.59
GGA2-213ENST00000568922 MBD5Q9P267 1494 aa18.75■□□□□ 0.59
GGA2-213ENST00000568922 CHIC2Q9UKJ5 165 aa18.74■□□□□ 0.59
GGA2-213ENST00000568922 SYCP2Q9BX26 1530 aa18.73■□□□□ 0.59
GGA2-213ENST00000568922 ADGRL2O95490 1459 aa18.73■□□□□ 0.59
GGA2-213ENST00000568922 CCDC141Q6ZP82 1450 aa18.73■□□□□ 0.59
GGA2-213ENST00000568922 ABCC1P33527 1531 aa18.71■□□□□ 0.59
GGA2-213ENST00000568922 HNRNPMP52272 730 aaKnown RBP eCLIP18.71■□□□□ 0.591e-16■■□□□ 13.2
GGA2-213ENST00000568922 FANCAO15360 1455 aa18.7■□□□□ 0.58
GGA2-213ENST00000568922 DHX57Q6P158 1386 aaKnown RBP18.7■□□□□ 0.58
GGA2-213ENST00000568922 RRP7BPQ9NSQ0 103 aa18.7■□□□□ 0.58
GGA2-213ENST00000568922 CFAP74Q9C0B2 1584 aa18.69■□□□□ 0.58
GGA2-213ENST00000568922 TSPY4P0CV99 314 aa18.69■□□□□ 0.58
GGA2-213ENST00000568922 TSPY10P0CW01 314 aa18.69■□□□□ 0.58
GGA2-213ENST00000568922 GLI2P10070 1586 aa18.69■□□□□ 0.58
GGA2-213ENST00000568922 MAST1Q9Y2H9 1570 aa18.69■□□□□ 0.58
GGA2-213ENST00000568922 C9orf84Q5VXU9 1444 aa18.68■□□□□ 0.58
GGA2-213ENST00000568922 NCOA1Q15788 1441 aa18.68■□□□□ 0.58
GGA2-213ENST00000568922 CD109Q6YHK3 1445 aa18.68■□□□□ 0.58
GGA2-213ENST00000568922 ANKRD30AQ9BXX3 1397 aa18.68■□□□□ 0.58
GGA2-213ENST00000568922 ARHGEF12Q9NZN5 1544 aa18.66■□□□□ 0.58
GGA2-213ENST00000568922 MAP3K4Q9Y6R4 1608 aa18.66■□□□□ 0.58
GGA2-213ENST00000568922 CLSPNQ9HAW4 1339 aa18.66■□□□□ 0.58
GGA2-213ENST00000568922 ACIN1Q9UKV3 1341 aaKnown RBP18.66■□□□□ 0.58
GGA2-213ENST00000568922 DIP2BQ9P265 1576 aa18.64■□□□□ 0.57
GGA2-213ENST00000568922 KDM6BO15054 1643 aa18.63■□□□□ 0.57
GGA2-213ENST00000568922 ADGRL1O94910 1474 aa18.61■□□□□ 0.57
GGA2-213ENST00000568922 PLXNC1O60486 1568 aa18.6■□□□□ 0.57
GGA2-213ENST00000568922 TRAPPC8Q9Y2L5 1435 aa18.6■□□□□ 0.57
GGA2-213ENST00000568922 NEO1Q92859 1461 aa18.59■□□□□ 0.57
GGA2-213ENST00000568922 SCAPERQ9BY12 1400 aa18.58■□□□□ 0.56
GGA2-213ENST00000568922 KIF15Q9NS87 1388 aa18.57■□□□□ 0.56
GGA2-213ENST00000568922 ANKRD50Q9ULJ7 1429 aa18.57■□□□□ 0.56
GGA2-213ENST00000568922 RTEL1-TNFRSF6BF6WH68 1400 aa18.56■□□□□ 0.56
GGA2-213ENST00000568922 FAM69CQ0P6D2 419 aa18.55■□□□□ 0.56
GGA2-213ENST00000568922 ZFYVE16Q7Z3T8 1539 aa18.53■□□□□ 0.56
GGA2-213ENST00000568922 KIF13AQ9H1H9 1805 aa18.53■□□□□ 0.56
GGA2-213ENST00000568922 INO80Q9ULG1 1556 aaPredicted RBP18.53■□□□□ 0.56
GGA2-213ENST00000568922 ZNF518AQ6AHZ1 1483 aa18.52■□□□□ 0.56
GGA2-213ENST00000568922 SPAG9O60271 1321 aaKnown RBP18.52■□□□□ 0.56
GGA2-213ENST00000568922 TRIM52Q96A61 297 aa18.52■□□□□ 0.56
GGA2-213ENST00000568922 DUOX2Q9NRD8 1548 aa18.52■□□□□ 0.55
GGA2-213ENST00000568922 AFAP1Q8N556 730 aa18.51■□□□□ 0.55
GGA2-213ENST00000568922 ATP7AQ04656 1500 aa18.5■□□□□ 0.55
GGA2-213ENST00000568922 POGZQ7Z3K3 1410 aa18.5■□□□□ 0.55
GGA2-213ENST00000568922 PPRC1Q5VV67 1664 aaKnown RBP18.49■□□□□ 0.55
GGA2-213ENST00000568922 KDM5CP41229 1560 aa18.49■□□□□ 0.55
GGA2-213ENST00000568922 TEX14Q8IWB6 1497 aa18.49■□□□□ 0.55
GGA2-213ENST00000568922 TSPOAP1O95153 1857 aa18.48■□□□□ 0.55
GGA2-213ENST00000568922 ERBINQ96RT1 1412 aa18.47■□□□□ 0.55
GGA2-213ENST00000568922 DENND4BO75064 1496 aaPredicted RBP18.47■□□□□ 0.55
GGA2-213ENST00000568922 DNAJC5Q9H3Z4 198 aa18.46■□□□□ 0.55
GGA2-213ENST00000568922 KIDINS220Q9ULH0 1771 aa18.46■□□□□ 0.55
GGA2-213ENST00000568922 KDM5DQ9BY66 1539 aa18.45■□□□□ 0.54
GGA2-213ENST00000568922 RICTORQ6R327 1708 aa18.45■□□□□ 0.54
GGA2-213ENST00000568922 MPHOSPH9Q99550 1183 aa18.44■□□□□ 0.54
GGA2-213ENST00000568922 HECW2Q9P2P5 1572 aa18.44■□□□□ 0.54
GGA2-213ENST00000568922 UNC13BO14795 1591 aa18.44■□□□□ 0.54
GGA2-213ENST00000568922 MLH3Q9UHC1 1453 aa18.44■□□□□ 0.54
GGA2-213ENST00000568922 PZPP20742 1482 aa18.43■□□□□ 0.54
GGA2-213ENST00000568922 MYT1LQ9UL68 1186 aa18.41■□□□□ 0.54
GGA2-213ENST00000568922 SLC4A1APQ9BWU0 796 aaKnown RBP18.4■□□□□ 0.54
GGA2-213ENST00000568922 EIF2AK4Q9P2K8 1649 aaKnown RBP18.4■□□□□ 0.54
GGA2-213ENST00000568922 NUP155O75694 1391 aa18.39■□□□□ 0.53
GGA2-213ENST00000568922 MAGI2Q86UL8 1455 aa18.38■□□□□ 0.53
GGA2-213ENST00000568922 FRMPD1Q5SYB0 1578 aa18.38■□□□□ 0.53
GGA2-213ENST00000568922 DHX29Q7Z478 1369 aaKnown RBP18.37■□□□□ 0.53
GGA2-213ENST00000568922 IQGAP3Q86VI3 1631 aa18.36■□□□□ 0.53
GGA2-213ENST00000568922 RAPGEF3O95398 923 aa18.36■□□□□ 0.53
GGA2-213ENST00000568922 ZMYM4Q5VZL5 1548 aa18.35■□□□□ 0.53
GGA2-213ENST00000568922 FAM135AQ9P2D6 1515 aa18.35■□□□□ 0.53
GGA2-213ENST00000568922 DEPDC5O75140 1603 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms