RNA–Protein interactions for RNA: ENST00000568454.5

TSC2-222, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TSC2, Length 5,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-222ENST00000568454 KTN1Q86UP2 1357 aaKnown RBP21.02■□□□□ 0.95
TSC2-222ENST00000568454 SETD5Q9C0A6 1442 aa21.01■□□□□ 0.95
TSC2-222ENST00000568454 RWDD1Q9H446 243 aaPredicted RBP21.01■□□□□ 0.95
TSC2-222ENST00000568454 NAP1L2Q9ULW6 460 aaPredicted RBP21.01■□□□□ 0.95
TSC2-222ENST00000568454 FHAD1B1AJZ9 1412 aa21■□□□□ 0.95
TSC2-222ENST00000568454 AMER1Q5JTC6 1135 aaPredicted RBP21■□□□□ 0.95
TSC2-222ENST00000568454 IPO8O15397 1037 aaKnown RBP20.99■□□□□ 0.95
TSC2-222ENST00000568454 KCNH8Q96L42 1107 aa20.99■□□□□ 0.95
TSC2-222ENST00000568454 SENP3Q9H4L4 574 aaPredicted RBP20.99■□□□□ 0.95
TSC2-222ENST00000568454 POGKQ9P215 609 aa20.98■□□□□ 0.95
TSC2-222ENST00000568454 RSPH6AQ9H0K4 717 aa20.97■□□□□ 0.95
TSC2-222ENST00000568454 DCAF11Q8TEB1 546 aa20.96■□□□□ 0.95
TSC2-222ENST00000568454 RALBP1Q15311 655 aa20.96■□□□□ 0.95
TSC2-222ENST00000568454 TAOK2Q9UL54 1235 aa20.94■□□□□ 0.94
TSC2-222ENST00000568454 TNNT3P45378 269 aaPredicted RBP20.94■□□□□ 0.94
TSC2-222ENST00000568454 PMFBP1Q8TBY8 1022 aa20.94■□□□□ 0.94
TSC2-222ENST00000568454 HTATSF1O43719 755 aaKnown RBP20.93■□□□□ 0.94
TSC2-222ENST00000568454 MORC1Q86VD1 984 aa20.93■□□□□ 0.94
TSC2-222ENST00000568454 PLEKHG5O94827 1062 aa20.92■□□□□ 0.94
TSC2-222ENST00000568454 HSP90AA2PQ14568 343 aaPredicted RBP20.91■□□□□ 0.94
TSC2-222ENST00000568454 ARID3AQ99856 593 aa20.91■□□□□ 0.94
TSC2-222ENST00000568454 KIAA1211Q6ZU35 1233 aa20.9■□□□□ 0.94
TSC2-222ENST00000568454 CECR2Q9BXF3 1484 aa20.9■□□□□ 0.94
TSC2-222ENST00000568454 CALD1Q05682 793 aaKnown RBP20.88■□□□□ 0.93
TSC2-222ENST00000568454 TULP1O00294 542 aaPredicted RBP20.88■□□□□ 0.93
TSC2-222ENST00000568454 VPS8Q8N3P4 1428 aa20.87■□□□□ 0.93
TSC2-222ENST00000568454 PDE3BQ13370 1112 aa20.87■□□□□ 0.93
TSC2-222ENST00000568454 MFAP1P55081 439 aaKnown RBP20.84■□□□□ 0.93
TSC2-222ENST00000568454 ITPRIPQ8IWB1 547 aa20.83■□□□□ 0.93
TSC2-222ENST00000568454 DDX11L8A8MPP1 907 aa20.83■□□□□ 0.93
TSC2-222ENST00000568454 TPM4P67936 248 aa20.83■□□□□ 0.93
TSC2-222ENST00000568454 CSPP1Q1MSJ5 1256 aa20.82■□□□□ 0.92
TSC2-222ENST00000568454 GNL2Q13823 731 aaKnown RBP20.82■□□□□ 0.92
TSC2-222ENST00000568454 ARHGAP35Q9NRY4 1499 aa20.81■□□□□ 0.92
TSC2-222ENST00000568454 GSE1Q14687 1217 aa20.81■□□□□ 0.92
TSC2-222ENST00000568454 PHF14O94880 888 aa20.8■□□□□ 0.92
TSC2-222ENST00000568454 FANCIQ9NVI1 1328 aa20.79■□□□□ 0.92
TSC2-222ENST00000568454 GOLGA2Q08379 1002 aa20.79■□□□□ 0.92
TSC2-222ENST00000568454 GOLGA6L1Q8N7Z2 621 aa20.78■□□□□ 0.92
TSC2-222ENST00000568454 RAB3GAP2Q9H2M9 1393 aa20.78■□□□□ 0.92
TSC2-222ENST00000568454 KANK1Q14678 1352 aa20.77■□□□□ 0.92
TSC2-222ENST00000568454 APBB1O00213 710 aa20.77■□□□□ 0.92
TSC2-222ENST00000568454 RTF1Q92541 710 aaKnown RBP20.75■□□□□ 0.91
TSC2-222ENST00000568454 SOGA1O94964 1423 aa20.75■□□□□ 0.91
TSC2-222ENST00000568454 SRPK2P78362 688 aaKnown RBP20.75■□□□□ 0.91
TSC2-222ENST00000568454 VSIG10Q8N0Z9 540 aa20.73■□□□□ 0.91
TSC2-222ENST00000568454 NLRP13Q86W25 1043 aa20.73■□□□□ 0.91
TSC2-222ENST00000568454 PHLDB1Q86UU1 1377 aa20.73■□□□□ 0.91
TSC2-222ENST00000568454 U2AF1L5P0DN76 240 aaPredicted RBP20.72■□□□□ 0.91
TSC2-222ENST00000568454 U2AF1Q01081 240 aaKnown RBP eCLIP20.72■□□□□ 0.91
TSC2-222ENST00000568454 SKOR2Q2VWA4 1001 aaPredicted RBP20.72■□□□□ 0.91
TSC2-222ENST00000568454 PKD2Q13563 968 aa20.72■□□□□ 0.91
TSC2-222ENST00000568454 PDE4AP27815 886 aa20.72■□□□□ 0.91
TSC2-222ENST00000568454 ROCK2O75116 1388 aaKnown RBP20.72■□□□□ 0.91
TSC2-222ENST00000568454 CCDC34Q96HJ3 373 aa20.71■□□□□ 0.91
TSC2-222ENST00000568454 FAM161AQ3B820 660 aa20.71■□□□□ 0.91
TSC2-222ENST00000568454 CENPQQ7L2Z9 268 aaPredicted RBP20.71■□□□□ 0.91
TSC2-222ENST00000568454 ST18O60284 1047 aa20.7■□□□□ 0.9
TSC2-222ENST00000568454 CENPJQ9HC77 1338 aaPredicted RBP20.7■□□□□ 0.9
TSC2-222ENST00000568454 HMMRO75330 724 aa20.69■□□□□ 0.9
TSC2-222ENST00000568454 SMC4Q9NTJ3 1288 aa20.69■□□□□ 0.9
TSC2-222ENST00000568454 MROH2BQ7Z745 1585 aa20.69■□□□□ 0.9
TSC2-222ENST00000568454 NOC3LQ8WTT2 800 aaKnown RBP20.69■□□□□ 0.9
TSC2-222ENST00000568454 HDGFL2Q7Z4V5 671 aaPredicted RBP20.68■□□□□ 0.9
TSC2-222ENST00000568454 CARMIL1Q5VZK9 1371 aa20.67■□□□□ 0.9
TSC2-222ENST00000568454 LMOD2Q6P5Q4 547 aa20.67■□□□□ 0.9
TSC2-222ENST00000568454 MPHOSPH9Q99550 1183 aa20.67■□□□□ 0.9
TSC2-222ENST00000568454 CHMP4AQ9BY43 222 aa20.67■□□□□ 0.9
TSC2-222ENST00000568454 CCDC88BA6NC98 1476 aa20.67■□□□□ 0.9
TSC2-222ENST00000568454 KANK4Q5T7N3 995 aaPredicted RBP20.65■□□□□ 0.9
TSC2-222ENST00000568454 FOXD4L1Q9NU39 408 aa20.64■□□□□ 0.89
TSC2-222ENST00000568454 FMN1Q68DA7 1419 aa20.64■□□□□ 0.89
TSC2-222ENST00000568454 GPATCH3Q96I76 525 aa20.64■□□□□ 0.89
TSC2-222ENST00000568454 NPHP1O15259 732 aa20.63■□□□□ 0.89
TSC2-222ENST00000568454 DDX49Q9Y6V7 483 aaKnown RBP20.63■□□□□ 0.89
TSC2-222ENST00000568454 HDAC5Q9UQL6 1122 aa20.62■□□□□ 0.89
TSC2-222ENST00000568454 CUX2O14529 1486 aa20.62■□□□□ 0.89
TSC2-222ENST00000568454 EIF3AQ14152 1382 aaKnown RBP20.61■□□□□ 0.89
TSC2-222ENST00000568454 FOXD1Q16676 465 aa20.61■□□□□ 0.89
TSC2-222ENST00000568454 TRIM6-TRIM34B2RNG4 842 aa20.61■□□□□ 0.89
TSC2-222ENST00000568454 HDGFP51858 240 aaKnown RBP20.6■□□□□ 0.89
TSC2-222ENST00000568454 ZBED9Q6R2W3 1325 aa20.6■□□□□ 0.89
TSC2-222ENST00000568454 STK31Q9BXU1 1019 aa20.6■□□□□ 0.89
TSC2-222ENST00000568454 KIF15Q9NS87 1388 aa20.6■□□□□ 0.89
TSC2-222ENST00000568454 CLUAP1Q96AJ1 413 aa20.6■□□□□ 0.89
TSC2-222ENST00000568454 KIF3AQ9Y496 699 aa20.59■□□□□ 0.89
TSC2-222ENST00000568454 KIF16BQ96L93 1317 aa20.58■□□□□ 0.89
TSC2-222ENST00000568454 TPM3P06753 285 aa20.58■□□□□ 0.89
TSC2-222ENST00000568454 HSP90B1P14625 803 aaKnown RBP20.58■□□□□ 0.89
TSC2-222ENST00000568454 MYBBP1AQ9BQG0 1328 aaKnown RBP20.58■□□□□ 0.88
TSC2-222ENST00000568454 CLSTN1O94985 981 aa20.57■□□□□ 0.88
TSC2-222ENST00000568454 RRP1P56182 461 aaKnown RBP20.57■□□□□ 0.88
TSC2-222ENST00000568454 ATP6V1DQ9Y5K8 247 aa20.56■□□□□ 0.88
TSC2-222ENST00000568454 SETQ01105 290 aaPredicted RBP20.56■□□□□ 0.88
TSC2-222ENST00000568454 L3MBTL2Q969R5 705 aa20.56■□□□□ 0.88
TSC2-222ENST00000568454 SOX12O15370 315 aa20.56■□□□□ 0.88
TSC2-222ENST00000568454 SLC4A3P48751 1232 aa20.56■□□□□ 0.88
TSC2-222ENST00000568454 SAFB2Q14151 953 aaKnown RBP eCLIP20.55■□□□□ 0.88
TSC2-222ENST00000568454 SMARCA2P51531 1590 aa20.55■□□□□ 0.88
TSC2-222ENST00000568454 SPAG9O60271 1321 aaKnown RBP20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms